RNA–Protein interactions for RNA: ENST00000575634.5

RPH3AL-217, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 4

Gene RPH3AL, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-217ENST00000575634 NISCHQ9Y2I1 1504 aa37.99■■■■□ 3.67
RPH3AL-217ENST00000575634 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
RPH3AL-217ENST00000575634 ABCC9O60706 1549 aa34.11■■■■□ 3.05
RPH3AL-217ENST00000575634 RB1CC1Q8TDY2 1594 aa32.46■■■□□ 2.79
RPH3AL-217ENST00000575634 NACADO15069 1562 aa32.24■■■□□ 2.75
RPH3AL-217ENST00000575634 DNAJC5BQ9UF47 199 aa32.03■■■□□ 2.72
RPH3AL-217ENST00000575634 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
RPH3AL-217ENST00000575634 MYO15BQ96JP2 1530 aa31.83■■■□□ 2.69
RPH3AL-217ENST00000575634 UNC13AQ9UPW8 1703 aa31.75■■■□□ 2.67
RPH3AL-217ENST00000575634 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
RPH3AL-217ENST00000575634 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
RPH3AL-217ENST00000575634 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
RPH3AL-217ENST00000575634 DCAF1Q9Y4B6 1507 aa31.4■■■□□ 2.62
RPH3AL-217ENST00000575634 SHROOM4Q9ULL8 1493 aa31.14■■■□□ 2.58
RPH3AL-217ENST00000575634 SCRIBQ14160 1630 aa31.06■■■□□ 2.56
RPH3AL-217ENST00000575634 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
RPH3AL-217ENST00000575634 EIF4G1Q04637 1599 aaKnown RBP30.77■■■□□ 2.52
RPH3AL-217ENST00000575634 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
RPH3AL-217ENST00000575634 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
RPH3AL-217ENST00000575634 ATAD2BQ9ULI0 1458 aa29.68■■■□□ 2.34
RPH3AL-217ENST00000575634 SMARCA4P51532 1647 aa29.65■■■□□ 2.34
RPH3AL-217ENST00000575634 SMARCA2P51531 1590 aa29.58■■■□□ 2.33
RPH3AL-217ENST00000575634 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
RPH3AL-217ENST00000575634 BAZ1AQ9NRL2 1556 aaPredicted RBP29.48■■■□□ 2.31
RPH3AL-217ENST00000575634 CUX2O14529 1486 aa29.43■■■□□ 2.3
RPH3AL-217ENST00000575634 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
RPH3AL-217ENST00000575634 DNAJC5Q9H3Z4 198 aa29.42■■■□□ 2.3
RPH3AL-217ENST00000575634 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
RPH3AL-217ENST00000575634 BAZ1BQ9UIG0 1483 aaKnown RBP29.37■■■□□ 2.29
RPH3AL-217ENST00000575634 NESP48681 1621 aa29.31■■■□□ 2.28
RPH3AL-217ENST00000575634 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
RPH3AL-217ENST00000575634 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
RPH3AL-217ENST00000575634 THOC2Q8NI27 1593 aaKnown RBP29.05■■■□□ 2.24
RPH3AL-217ENST00000575634 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
RPH3AL-217ENST00000575634 PDS5BQ9NTI5 1447 aa28.91■■■□□ 2.22
RPH3AL-217ENST00000575634 WIZO95785 1651 aa28.9■■■□□ 2.22
RPH3AL-217ENST00000575634 CADPSQ9ULU8 1353 aa28.85■■■□□ 2.21
RPH3AL-217ENST00000575634 MRC2Q9UBG0 1479 aa28.69■■■□□ 2.18
RPH3AL-217ENST00000575634 WDR62O43379 1518 aa28.65■■■□□ 2.18
RPH3AL-217ENST00000575634 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
RPH3AL-217ENST00000575634 TOP2AP11388 1531 aaKnown RBP28.56■■■□□ 2.16
RPH3AL-217ENST00000575634 CEP164Q9UPV0 1460 aa28.55■■■□□ 2.16
RPH3AL-217ENST00000575634 CFTRP13569 1480 aa28.54■■■□□ 2.16
RPH3AL-217ENST00000575634 FANCD2Q9BXW9 1451 aa28.53■■■□□ 2.16
RPH3AL-217ENST00000575634 URB2Q14146 1524 aaKnown RBP28.31■■■□□ 2.12
RPH3AL-217ENST00000575634 PRDM2Q13029 1718 aa28.25■■■□□ 2.11
RPH3AL-217ENST00000575634 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
RPH3AL-217ENST00000575634 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
RPH3AL-217ENST00000575634 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
RPH3AL-217ENST00000575634 IFT140Q96RY7 1462 aa28■■■□□ 2.07
RPH3AL-217ENST00000575634 TOPBP1Q92547 1522 aa27.99■■■□□ 2.07
RPH3AL-217ENST00000575634 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
RPH3AL-217ENST00000575634 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
RPH3AL-217ENST00000575634 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
RPH3AL-217ENST00000575634 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
RPH3AL-217ENST00000575634 TARBP1Q13395 1621 aaKnown RBP27.77■■■□□ 2.04
RPH3AL-217ENST00000575634 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
RPH3AL-217ENST00000575634 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
RPH3AL-217ENST00000575634 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
RPH3AL-217ENST00000575634 POLA1P09884 1462 aaPredicted RBP27.71■■■□□ 2.03
RPH3AL-217ENST00000575634 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
RPH3AL-217ENST00000575634 ARHGEF11O15085 1522 aa27.63■■■□□ 2.01
RPH3AL-217ENST00000575634 CHD1O14646 1710 aa27.6■■■□□ 2.01
RPH3AL-217ENST00000575634 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
RPH3AL-217ENST00000575634 SOGA1O94964 1423 aa27.54■■■□□ 2
RPH3AL-217ENST00000575634 FGD5Q6ZNL6 1462 aa27.52■■■□□ 2
RPH3AL-217ENST00000575634 CUX1P39880 1505 aa27.51■■□□□ 1.99
RPH3AL-217ENST00000575634 TDRD9Q8NDG6 1382 aaKnown RBP27.49■■□□□ 1.99
RPH3AL-217ENST00000575634 WDR97A6NE52 1622 aa27.48■■□□□ 1.99
RPH3AL-217ENST00000575634 FBLN2P98095 1184 aa27.43■■□□□ 1.98
RPH3AL-217ENST00000575634 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
RPH3AL-217ENST00000575634 ARAP1Q96P48 1450 aa27.37■■□□□ 1.97
RPH3AL-217ENST00000575634 CYB5RLQ6IPT4 315 aa27.35■■□□□ 1.97
RPH3AL-217ENST00000575634 MAGI1Q96QZ7 1491 aaPredicted RBP27.34■■□□□ 1.97
RPH3AL-217ENST00000575634 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
RPH3AL-217ENST00000575634 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
RPH3AL-217ENST00000575634 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
RPH3AL-217ENST00000575634 SUPT5HO00267 1087 aaKnown RBP27.25■■□□□ 1.95
RPH3AL-217ENST00000575634 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
RPH3AL-217ENST00000575634 CHMP7Q8WUX9 453 aaPredicted RBP27.24■■□□□ 1.95
RPH3AL-217ENST00000575634 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
RPH3AL-217ENST00000575634 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
RPH3AL-217ENST00000575634 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
RPH3AL-217ENST00000575634 ABCA5Q8WWZ7 1642 aa27.2■■□□□ 1.95
RPH3AL-217ENST00000575634 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
RPH3AL-217ENST00000575634 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
RPH3AL-217ENST00000575634 BIVM-ERCC5R4GMW8 1640 aa27.06■■□□□ 1.92
RPH3AL-217ENST00000575634 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
RPH3AL-217ENST00000575634 ADAMTS12P58397 1594 aa27■■□□□ 1.91
RPH3AL-217ENST00000575634 GRIN2AQ12879 1464 aa26.99■■□□□ 1.91
RPH3AL-217ENST00000575634 NUP160Q12769 1436 aa26.92■■□□□ 1.9
RPH3AL-217ENST00000575634 CEP170Q5SW79 1584 aa26.91■■□□□ 1.9
RPH3AL-217ENST00000575634 FHAD1B1AJZ9 1412 aa26.88■■□□□ 1.89
RPH3AL-217ENST00000575634 ERCC6L2Q5T890 1561 aa26.88■■□□□ 1.89
RPH3AL-217ENST00000575634 ERICH3Q5RHP9 1530 aa26.87■■□□□ 1.89
RPH3AL-217ENST00000575634 SHROOM2Q13796 1616 aa26.82■■□□□ 1.88
RPH3AL-217ENST00000575634 RUSC2Q8N2Y8 1516 aa26.62■■□□□ 1.85
RPH3AL-217ENST00000575634 PRG4Q92954 1404 aaPredicted RBP26.62■■□□□ 1.85
RPH3AL-217ENST00000575634 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
RPH3AL-217ENST00000575634 IGF1RP08069 1367 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms