RNA–Protein interactions for RNA: ENST00000575412.1

ARHGAP17-216, Transcript of Rho GTPase activating protein 17, humanhuman

TSL 2

Gene ARHGAP17, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP17-216ENST00000575412 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
ARHGAP17-216ENST00000575412 CCDC180Q9P1Z9 1646 aa16.48■□□□□ 0.23
ARHGAP17-216ENST00000575412 ABCC9O60706 1549 aa16.15■□□□□ 0.18
ARHGAP17-216ENST00000575412 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
ARHGAP17-216ENST00000575412 NACADO15069 1562 aa15.57■□□□□ 0.08
ARHGAP17-216ENST00000575412 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
ARHGAP17-216ENST00000575412 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
ARHGAP17-216ENST00000575412 ZCCHC6Q5VYS8 1495 aaKnown RBP15.44■□□□□ 0.06
ARHGAP17-216ENST00000575412 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
ARHGAP17-216ENST00000575412 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
ARHGAP17-216ENST00000575412 UNC13AQ9UPW8 1703 aa15.08■□□□□ 0
ARHGAP17-216ENST00000575412 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
ARHGAP17-216ENST00000575412 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
ARHGAP17-216ENST00000575412 SHROOM4Q9ULL8 1493 aa14.99□□□□□ -0.01
ARHGAP17-216ENST00000575412 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
ARHGAP17-216ENST00000575412 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
ARHGAP17-216ENST00000575412 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
ARHGAP17-216ENST00000575412 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
ARHGAP17-216ENST00000575412 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
ARHGAP17-216ENST00000575412 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
ARHGAP17-216ENST00000575412 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
ARHGAP17-216ENST00000575412 ATAD2BQ9ULI0 1458 aa14.36□□□□□ -0.11
ARHGAP17-216ENST00000575412 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
ARHGAP17-216ENST00000575412 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
ARHGAP17-216ENST00000575412 MROH2BQ7Z745 1585 aa14.27□□□□□ -0.12
ARHGAP17-216ENST00000575412 HMGXB3Q12766 1538 aa14.26□□□□□ -0.13
ARHGAP17-216ENST00000575412 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
ARHGAP17-216ENST00000575412 RSF1Q96T23 1441 aaPredicted RBP14.15□□□□□ -0.14
ARHGAP17-216ENST00000575412 DNAJC5Q9H3Z4 198 aa14.1□□□□□ -0.15
ARHGAP17-216ENST00000575412 WIZO95785 1651 aa14.08□□□□□ -0.16
ARHGAP17-216ENST00000575412 TOP2AP11388 1531 aaKnown RBP13.98□□□□□ -0.17
ARHGAP17-216ENST00000575412 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
ARHGAP17-216ENST00000575412 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
ARHGAP17-216ENST00000575412 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
ARHGAP17-216ENST00000575412 PDS5BQ9NTI5 1447 aa13.94□□□□□ -0.18
ARHGAP17-216ENST00000575412 NESP48681 1621 aa13.93□□□□□ -0.18
ARHGAP17-216ENST00000575412 CFTRP13569 1480 aa13.86□□□□□ -0.19
ARHGAP17-216ENST00000575412 CUX2O14529 1486 aa13.85□□□□□ -0.19
ARHGAP17-216ENST00000575412 CCDC88BA6NC98 1476 aa13.84□□□□□ -0.19
ARHGAP17-216ENST00000575412 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
ARHGAP17-216ENST00000575412 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
ARHGAP17-216ENST00000575412 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
ARHGAP17-216ENST00000575412 KIF21AQ7Z4S6 1674 aa13.74□□□□□ -0.21
ARHGAP17-216ENST00000575412 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
ARHGAP17-216ENST00000575412 THOC2Q8NI27 1593 aaKnown RBP13.71□□□□□ -0.21
ARHGAP17-216ENST00000575412 WDR62O43379 1518 aa13.66□□□□□ -0.22
ARHGAP17-216ENST00000575412 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
ARHGAP17-216ENST00000575412 ABCC8Q09428 1581 aa13.62□□□□□ -0.23
ARHGAP17-216ENST00000575412 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
ARHGAP17-216ENST00000575412 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
ARHGAP17-216ENST00000575412 DNMBPQ6XZF7 1577 aa13.5□□□□□ -0.25
ARHGAP17-216ENST00000575412 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
ARHGAP17-216ENST00000575412 SOGA1O94964 1423 aa13.41□□□□□ -0.26
ARHGAP17-216ENST00000575412 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
ARHGAP17-216ENST00000575412 CUX1P39880 1505 aa13.39□□□□□ -0.27
ARHGAP17-216ENST00000575412 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
ARHGAP17-216ENST00000575412 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
ARHGAP17-216ENST00000575412 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
ARHGAP17-216ENST00000575412 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
ARHGAP17-216ENST00000575412 OSCARQ8IYS5 282 aa13.34□□□□□ -0.27
ARHGAP17-216ENST00000575412 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
ARHGAP17-216ENST00000575412 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
ARHGAP17-216ENST00000575412 WDR97A6NE52 1622 aa13.31□□□□□ -0.28
ARHGAP17-216ENST00000575412 AQRO60306 1485 aaKnown RBP eCLIP13.31□□□□□ -0.28
ARHGAP17-216ENST00000575412 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
ARHGAP17-216ENST00000575412 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
ARHGAP17-216ENST00000575412 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
ARHGAP17-216ENST00000575412 ABCA10Q8WWZ4 1543 aa13.27□□□□□ -0.29
ARHGAP17-216ENST00000575412 BIVM-ERCC5R4GMW8 1640 aa13.26□□□□□ -0.29
ARHGAP17-216ENST00000575412 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
ARHGAP17-216ENST00000575412 CHIC1Q5VXU3 224 aa13.24□□□□□ -0.29
ARHGAP17-216ENST00000575412 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
ARHGAP17-216ENST00000575412 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
ARHGAP17-216ENST00000575412 SYNJ1O43426 1573 aa13.23□□□□□ -0.29
ARHGAP17-216ENST00000575412 FBLN2P98095 1184 aa13.21□□□□□ -0.29
ARHGAP17-216ENST00000575412 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
ARHGAP17-216ENST00000575412 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
ARHGAP17-216ENST00000575412 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
ARHGAP17-216ENST00000575412 SYNJ2O15056 1496 aa13.15□□□□□ -0.3
ARHGAP17-216ENST00000575412 ABCA5Q8WWZ7 1642 aa13.14□□□□□ -0.31
ARHGAP17-216ENST00000575412 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
ARHGAP17-216ENST00000575412 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
ARHGAP17-216ENST00000575412 FHAD1B1AJZ9 1412 aa13.1□□□□□ -0.31
ARHGAP17-216ENST00000575412 PBRM1Q86U86 1689 aa13.09□□□□□ -0.31
ARHGAP17-216ENST00000575412 CHD1O14646 1710 aa13.08□□□□□ -0.32
ARHGAP17-216ENST00000575412 IGF1RP08069 1367 aa13.06□□□□□ -0.32
ARHGAP17-216ENST00000575412 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
ARHGAP17-216ENST00000575412 ADAMTS12P58397 1594 aa13.02□□□□□ -0.33
ARHGAP17-216ENST00000575412 ARHGEF11O15085 1522 aa13□□□□□ -0.33
ARHGAP17-216ENST00000575412 CLASP1Q7Z460 1538 aa13□□□□□ -0.33
ARHGAP17-216ENST00000575412 NUP160Q12769 1436 aa13□□□□□ -0.33
ARHGAP17-216ENST00000575412 CARMIL1Q5VZK9 1371 aa12.98□□□□□ -0.33
ARHGAP17-216ENST00000575412 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
ARHGAP17-216ENST00000575412 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
ARHGAP17-216ENST00000575412 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
ARHGAP17-216ENST00000575412 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
ARHGAP17-216ENST00000575412 CUL7Q14999 1698 aa12.96□□□□□ -0.34
ARHGAP17-216ENST00000575412 JPH4Q96JJ6 628 aa12.94□□□□□ -0.34
ARHGAP17-216ENST00000575412 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
ARHGAP17-216ENST00000575412 KIAA0586Q9BVV6 1533 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms