RNA–Protein interactions for RNA: ENST00000575243.5

CCNE1-205, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-205ENST00000575243 NISCHQ9Y2I1 1504 aa48.34■■■■■ 5.33
CCNE1-205ENST00000575243 ABCC9O60706 1549 aa44.3■■■■■ 4.68
CCNE1-205ENST00000575243 CCDC180Q9P1Z9 1646 aa43.54■■■■■ 4.56
CCNE1-205ENST00000575243 DNAJC5BQ9UF47 199 aa42.29■■■■■ 4.36
CCNE1-205ENST00000575243 RB1CC1Q8TDY2 1594 aa41.8■■■■■ 4.28
CCNE1-205ENST00000575243 NACADO15069 1562 aa41.37■■■■■ 4.21
CCNE1-205ENST00000575243 PABPN1Q86U42 306 aaKnown RBP eCLIP41.23■■■■■ 4.19
CCNE1-205ENST00000575243 DCAF8L2P0C7V8 631 aa41.17■■■■■ 4.18
CCNE1-205ENST00000575243 UNC13AQ9UPW8 1703 aa40.84■■■■■ 4.13
CCNE1-205ENST00000575243 BICRAQ9NZM4 1560 aa40.69■■■■■ 4.1
CCNE1-205ENST00000575243 MYO15BQ96JP2 1530 aa40.6■■■■■ 4.09
CCNE1-205ENST00000575243 CECR2Q9BXF3 1484 aa39.95■■■■□ 3.99
CCNE1-205ENST00000575243 SHROOM4Q9ULL8 1493 aa39.95■■■■□ 3.99
CCNE1-205ENST00000575243 CC2D2AQ9P2K1 1620 aa39.94■■■■□ 3.99
CCNE1-205ENST00000575243 ZCCHC6Q5VYS8 1495 aaKnown RBP39.9■■■■□ 3.98
CCNE1-205ENST00000575243 DCAF1Q9Y4B6 1507 aa39.86■■■■□ 3.97
CCNE1-205ENST00000575243 EIF4G1Q04637 1599 aaKnown RBP39.7■■■■□ 3.95
CCNE1-205ENST00000575243 SCRIBQ14160 1630 aa39.69■■■■□ 3.94
CCNE1-205ENST00000575243 DNAJC5Q9H3Z4 198 aa39.22■■■■□ 3.87
CCNE1-205ENST00000575243 CUX2O14529 1486 aa38.38■■■■□ 3.73
CCNE1-205ENST00000575243 NCAPD3P42695 1498 aa38.28■■■■□ 3.72
CCNE1-205ENST00000575243 ERCC6Q03468 1493 aa38.22■■■■□ 3.71
CCNE1-205ENST00000575243 ATAD2BQ9ULI0 1458 aa38.07■■■■□ 3.68
CCNE1-205ENST00000575243 NESP48681 1621 aa37.9■■■■□ 3.66
CCNE1-205ENST00000575243 HMGXB3Q12766 1538 aa37.85■■■■□ 3.65
CCNE1-205ENST00000575243 SMARCA2P51531 1590 aa37.84■■■■□ 3.65
CCNE1-205ENST00000575243 SMARCA4P51532 1647 aa37.8■■■■□ 3.64
CCNE1-205ENST00000575243 BAZ1BQ9UIG0 1483 aaKnown RBP37.61■■■■□ 3.61
CCNE1-205ENST00000575243 THOC2Q8NI27 1593 aaKnown RBP37.55■■■■□ 3.6
CCNE1-205ENST00000575243 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.6
CCNE1-205ENST00000575243 PEG3Q9GZU2 1588 aa37.45■■■■□ 3.59
CCNE1-205ENST00000575243 LAMC3Q9Y6N6 1575 aa37.43■■■■□ 3.58
CCNE1-205ENST00000575243 PDS5BQ9NTI5 1447 aa37.28■■■■□ 3.56
CCNE1-205ENST00000575243 KIF21AQ7Z4S6 1674 aa37.28■■■■□ 3.56
CCNE1-205ENST00000575243 MROH2BQ7Z745 1585 aa37.27■■■■□ 3.56
CCNE1-205ENST00000575243 TRIM41Q8WV44 630 aa37.2■■■■□ 3.55
CCNE1-205ENST00000575243 CADPSQ9ULU8 1353 aa37.09■■■■□ 3.53
CCNE1-205ENST00000575243 MRC2Q9UBG0 1479 aa36.99■■■■□ 3.51
CCNE1-205ENST00000575243 WDR62O43379 1518 aa36.9■■■■□ 3.5
CCNE1-205ENST00000575243 WIZO95785 1651 aa36.76■■■■□ 3.47
CCNE1-205ENST00000575243 CEP164Q9UPV0 1460 aa36.69■■■■□ 3.46
CCNE1-205ENST00000575243 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
CCNE1-205ENST00000575243 OSCARQ8IYS5 282 aa36.62■■■■□ 3.45
CCNE1-205ENST00000575243 CFTRP13569 1480 aa36.52■■■■□ 3.44
CCNE1-205ENST00000575243 URB2Q14146 1524 aaKnown RBP36.4■■■■□ 3.42
CCNE1-205ENST00000575243 RSF1Q96T23 1441 aaPredicted RBP36.28■■■■□ 3.4
CCNE1-205ENST00000575243 TOP2AP11388 1531 aaKnown RBP36.21■■■■□ 3.39
CCNE1-205ENST00000575243 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
CCNE1-205ENST00000575243 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
CCNE1-205ENST00000575243 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
CCNE1-205ENST00000575243 ZNF608Q9ULD9 1512 aaPredicted RBP36.07■■■■□ 3.36
CCNE1-205ENST00000575243 IFT140Q96RY7 1462 aa36■■■■□ 3.35
CCNE1-205ENST00000575243 ARHGEF11O15085 1522 aa35.97■■■■□ 3.35
CCNE1-205ENST00000575243 PRDM2Q13029 1718 aa35.92■■■■□ 3.34
CCNE1-205ENST00000575243 CCDC88BA6NC98 1476 aa35.9■■■■□ 3.34
CCNE1-205ENST00000575243 TOPBP1Q92547 1522 aa35.88■■■■□ 3.33
CCNE1-205ENST00000575243 CYB5RLQ6IPT4 315 aa35.83■■■■□ 3.33
CCNE1-205ENST00000575243 EIF4G3O43432 1585 aaKnown RBP35.73■■■■□ 3.31
CCNE1-205ENST00000575243 ABCC8Q09428 1581 aa35.71■■■■□ 3.31
CCNE1-205ENST00000575243 AQRO60306 1485 aaKnown RBP eCLIP35.68■■■■□ 3.3
CCNE1-205ENST00000575243 DNMBPQ6XZF7 1577 aa35.64■■■■□ 3.3
CCNE1-205ENST00000575243 TRHP20396 242 aaPredicted RBP35.6■■■■□ 3.29
CCNE1-205ENST00000575243 TARBP1Q13395 1621 aaKnown RBP35.59■■■■□ 3.29
CCNE1-205ENST00000575243 ARAP1Q96P48 1450 aa35.59■■■■□ 3.29
CCNE1-205ENST00000575243 CHD1O14646 1710 aa35.58■■■■□ 3.29
CCNE1-205ENST00000575243 FBLN2P98095 1184 aa35.57■■■■□ 3.28
CCNE1-205ENST00000575243 POLA1P09884 1462 aaPredicted RBP35.47■■■■□ 3.27
CCNE1-205ENST00000575243 RAD54L2Q9Y4B4 1467 aa35.41■■■■□ 3.26
CCNE1-205ENST00000575243 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
CCNE1-205ENST00000575243 SOGA1O94964 1423 aa35.33■■■■□ 3.25
CCNE1-205ENST00000575243 SNAPC4Q5SXM2 1469 aa35.23■■■■□ 3.23
CCNE1-205ENST00000575243 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
CCNE1-205ENST00000575243 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
CCNE1-205ENST00000575243 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
CCNE1-205ENST00000575243 WDR97A6NE52 1622 aa35.09■■■■□ 3.21
CCNE1-205ENST00000575243 MAGI1Q96QZ7 1491 aaPredicted RBP35.09■■■■□ 3.21
CCNE1-205ENST00000575243 SYNJ1O43426 1573 aa35.08■■■■□ 3.21
CCNE1-205ENST00000575243 GRIN2BQ13224 1484 aa35.04■■■■□ 3.2
CCNE1-205ENST00000575243 CUX1P39880 1505 aa35.03■■■■□ 3.2
CCNE1-205ENST00000575243 SYNJ2O15056 1496 aa35■■■■□ 3.19
CCNE1-205ENST00000575243 AEBP2Q6ZN18 517 aaPredicted RBP34.99■■■■□ 3.19
CCNE1-205ENST00000575243 GAPVD1Q14C86 1478 aa34.9■■■■□ 3.18
CCNE1-205ENST00000575243 PBRM1Q86U86 1689 aa34.78■■■■□ 3.16
CCNE1-205ENST00000575243 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
CCNE1-205ENST00000575243 ERCC6L2Q5T890 1561 aa34.68■■■■□ 3.14
CCNE1-205ENST00000575243 ABCA5Q8WWZ7 1642 aa34.68■■■■□ 3.14
CCNE1-205ENST00000575243 GRIN2AQ12879 1464 aa34.59■■■■□ 3.13
CCNE1-205ENST00000575243 NUP160Q12769 1436 aa34.53■■■■□ 3.12
CCNE1-205ENST00000575243 CEP170Q5SW79 1584 aa34.52■■■■□ 3.12
CCNE1-205ENST00000575243 ADAMTS12P58397 1594 aa34.45■■■■□ 3.11
CCNE1-205ENST00000575243 WRNQ14191 1432 aaPredicted RBP eCLIP34.45■■■■□ 3.11
CCNE1-205ENST00000575243 SHROOM2Q13796 1616 aa34.41■■■■□ 3.1
CCNE1-205ENST00000575243 FHAD1B1AJZ9 1412 aa34.38■■■■□ 3.09
CCNE1-205ENST00000575243 KIF13AQ9H1H9 1805 aa34.27■■■■□ 3.08
CCNE1-205ENST00000575243 PRG4Q92954 1404 aaPredicted RBP34.26■■■■□ 3.07
CCNE1-205ENST00000575243 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
CCNE1-205ENST00000575243 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
CCNE1-205ENST00000575243 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
CCNE1-205ENST00000575243 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
CCNE1-205ENST00000575243 ERICH3Q5RHP9 1530 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms