RNA–Protein interactions for RNA: ENST00000574761.1

ABCC1-206, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 2

Gene ABCC1, Length 996 nt, Biotype retained intron, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-206ENST00000574761 NISCHQ9Y2I1 1504 aa30.34■■■□□ 2.45
ABCC1-206ENST00000574761 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
ABCC1-206ENST00000574761 ABCC9O60706 1549 aa26.54■■□□□ 1.84
ABCC1-206ENST00000574761 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
ABCC1-206ENST00000574761 RB1CC1Q8TDY2 1594 aa25.39■■□□□ 1.65
ABCC1-206ENST00000574761 NACADO15069 1562 aa25.34■■□□□ 1.65
ABCC1-206ENST00000574761 ZCCHC6Q5VYS8 1495 aaKnown RBP25.21■■□□□ 1.63
ABCC1-206ENST00000574761 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
ABCC1-206ENST00000574761 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
ABCC1-206ENST00000574761 PABPN1Q86U42 306 aaKnown RBP eCLIP24.93■■□□□ 1.58
ABCC1-206ENST00000574761 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
ABCC1-206ENST00000574761 SCRIBQ14160 1630 aa24.63■■□□□ 1.53
ABCC1-206ENST00000574761 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
ABCC1-206ENST00000574761 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
ABCC1-206ENST00000574761 SHROOM4Q9ULL8 1493 aa24.26■■□□□ 1.47
ABCC1-206ENST00000574761 EIF4G1Q04637 1599 aaKnown RBP23.97■■□□□ 1.43
ABCC1-206ENST00000574761 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
ABCC1-206ENST00000574761 CECR2Q9BXF3 1484 aa23.82■■□□□ 1.4
ABCC1-206ENST00000574761 BAZ1AQ9NRL2 1556 aaPredicted RBP23.49■■□□□ 1.35
ABCC1-206ENST00000574761 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
ABCC1-206ENST00000574761 ATAD2BQ9ULI0 1458 aa23.46■■□□□ 1.35
ABCC1-206ENST00000574761 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
ABCC1-206ENST00000574761 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
ABCC1-206ENST00000574761 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
ABCC1-206ENST00000574761 BAZ1BQ9UIG0 1483 aaKnown RBP23.27■■□□□ 1.32
ABCC1-206ENST00000574761 HMGXB3Q12766 1538 aa23.22■■□□□ 1.31
ABCC1-206ENST00000574761 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
ABCC1-206ENST00000574761 RSF1Q96T23 1441 aaPredicted RBP23.16■■□□□ 1.3
ABCC1-206ENST00000574761 WIZO95785 1651 aa23.12■■□□□ 1.29
ABCC1-206ENST00000574761 NESP48681 1621 aa22.93■■□□□ 1.26
ABCC1-206ENST00000574761 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
ABCC1-206ENST00000574761 TOP2AP11388 1531 aaKnown RBP22.84■■□□□ 1.25
ABCC1-206ENST00000574761 CADPSQ9ULU8 1353 aa22.82■■□□□ 1.24
ABCC1-206ENST00000574761 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
ABCC1-206ENST00000574761 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
ABCC1-206ENST00000574761 PDS5BQ9NTI5 1447 aa22.74■■□□□ 1.23
ABCC1-206ENST00000574761 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
ABCC1-206ENST00000574761 CFTRP13569 1480 aa22.6■■□□□ 1.21
ABCC1-206ENST00000574761 CUX2O14529 1486 aa22.54■■□□□ 1.2
ABCC1-206ENST00000574761 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
ABCC1-206ENST00000574761 KIF21AQ7Z4S6 1674 aa22.52■■□□□ 1.2
ABCC1-206ENST00000574761 CEP164Q9UPV0 1460 aa22.47■■□□□ 1.19
ABCC1-206ENST00000574761 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
ABCC1-206ENST00000574761 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
ABCC1-206ENST00000574761 WDR62O43379 1518 aa22.29■■□□□ 1.16
ABCC1-206ENST00000574761 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
ABCC1-206ENST00000574761 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
ABCC1-206ENST00000574761 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
ABCC1-206ENST00000574761 TOPBP1Q92547 1522 aa22.13■■□□□ 1.13
ABCC1-206ENST00000574761 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
ABCC1-206ENST00000574761 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
ABCC1-206ENST00000574761 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
ABCC1-206ENST00000574761 SOGA1O94964 1423 aa21.96■■□□□ 1.11
ABCC1-206ENST00000574761 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
ABCC1-206ENST00000574761 CUX1P39880 1505 aa21.94■■□□□ 1.1
ABCC1-206ENST00000574761 ZNF608Q9ULD9 1512 aaPredicted RBP21.94■■□□□ 1.1
ABCC1-206ENST00000574761 RAD54L2Q9Y4B4 1467 aa21.92■■□□□ 1.1
ABCC1-206ENST00000574761 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
ABCC1-206ENST00000574761 AQRO60306 1485 aaKnown RBP eCLIP21.87■■□□□ 1.09
ABCC1-206ENST00000574761 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
ABCC1-206ENST00000574761 WRNQ14191 1432 aaPredicted RBP eCLIP21.85■■□□□ 1.09
ABCC1-206ENST00000574761 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
ABCC1-206ENST00000574761 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
ABCC1-206ENST00000574761 FBLN2P98095 1184 aa21.78■■□□□ 1.08
ABCC1-206ENST00000574761 EIF4G3O43432 1585 aaKnown RBP21.73■■□□□ 1.07
ABCC1-206ENST00000574761 SYNJ1O43426 1573 aa21.7■■□□□ 1.06
ABCC1-206ENST00000574761 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
ABCC1-206ENST00000574761 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
ABCC1-206ENST00000574761 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
ABCC1-206ENST00000574761 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
ABCC1-206ENST00000574761 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.05
ABCC1-206ENST00000574761 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
ABCC1-206ENST00000574761 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
ABCC1-206ENST00000574761 WDR97A6NE52 1622 aa21.58■■□□□ 1.04
ABCC1-206ENST00000574761 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
ABCC1-206ENST00000574761 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
ABCC1-206ENST00000574761 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
ABCC1-206ENST00000574761 SYNJ2O15056 1496 aa21.46■■□□□ 1.03
ABCC1-206ENST00000574761 CHD1O14646 1710 aa21.45■■□□□ 1.02
ABCC1-206ENST00000574761 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
ABCC1-206ENST00000574761 KIF27Q86VH2 1401 aa21.41■■□□□ 1.02
ABCC1-206ENST00000574761 FHAD1B1AJZ9 1412 aa21.38■■□□□ 1.01
ABCC1-206ENST00000574761 IGF1RP08069 1367 aa21.37■■□□□ 1.01
ABCC1-206ENST00000574761 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
ABCC1-206ENST00000574761 GRIN2AQ12879 1464 aa21.32■■□□□ 1
ABCC1-206ENST00000574761 CYB5RLQ6IPT4 315 aa21.31■■□□□ 1
ABCC1-206ENST00000574761 ADAMTS12P58397 1594 aa21.3■■□□□ 1
ABCC1-206ENST00000574761 ARHGEF11O15085 1522 aa21.28■■□□□ 1
ABCC1-206ENST00000574761 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
ABCC1-206ENST00000574761 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
ABCC1-206ENST00000574761 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
ABCC1-206ENST00000574761 CARMIL1Q5VZK9 1371 aa21.25■□□□□ 0.99
ABCC1-206ENST00000574761 CLASP1Q7Z460 1538 aa21.24■□□□□ 0.99
ABCC1-206ENST00000574761 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
ABCC1-206ENST00000574761 NUP160Q12769 1436 aa21.21■□□□□ 0.99
ABCC1-206ENST00000574761 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
ABCC1-206ENST00000574761 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
ABCC1-206ENST00000574761 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
ABCC1-206ENST00000574761 CUL7Q14999 1698 aa21.12■□□□□ 0.97
ABCC1-206ENST00000574761 FAM9AQ8IZU1 332 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms