RNA–Protein interactions for RNA: ENST00000574734.5

TXNDC17-207, Transcript of thioredoxin domain containing 17, humanhuman

TSL 3

Gene TXNDC17, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNDC17-207ENST00000574734 NISCHQ9Y2I1 1504 aa48.51■■■■■ 5.36
TXNDC17-207ENST00000574734 CCDC180Q9P1Z9 1646 aa43.15■■■■■ 4.5
TXNDC17-207ENST00000574734 ABCC9O60706 1549 aa42.3■■■■■ 4.36
TXNDC17-207ENST00000574734 RB1CC1Q8TDY2 1594 aa40.68■■■■■ 4.1
TXNDC17-207ENST00000574734 DCAF8L2P0C7V8 631 aa40.63■■■■■ 4.09
TXNDC17-207ENST00000574734 NACADO15069 1562 aa40.61■■■■■ 4.09
TXNDC17-207ENST00000574734 ZCCHC6Q5VYS8 1495 aaKnown RBP40.38■■■■■ 4.05
TXNDC17-207ENST00000574734 MYO15BQ96JP2 1530 aa40.34■■■■■ 4.05
TXNDC17-207ENST00000574734 DCAF1Q9Y4B6 1507 aa40.14■■■■■ 4.02
TXNDC17-207ENST00000574734 UNC13AQ9UPW8 1703 aa39.71■■■■□ 3.95
TXNDC17-207ENST00000574734 PABPN1Q86U42 306 aaKnown RBP eCLIP39.54■■■■□ 3.92
TXNDC17-207ENST00000574734 BICRAQ9NZM4 1560 aa39.41■■■■□ 3.9
TXNDC17-207ENST00000574734 SCRIBQ14160 1630 aa39.36■■■■□ 3.89
TXNDC17-207ENST00000574734 SHROOM4Q9ULL8 1493 aa39.03■■■■□ 3.84
TXNDC17-207ENST00000574734 DNAJC5BQ9UF47 199 aa38.89■■■■□ 3.82
TXNDC17-207ENST00000574734 EIF4G1Q04637 1599 aaKnown RBP38.4■■■■□ 3.74
TXNDC17-207ENST00000574734 CC2D2AQ9P2K1 1620 aa38.26■■■■□ 3.71
TXNDC17-207ENST00000574734 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
TXNDC17-207ENST00000574734 SMARCA4P51532 1647 aa37.65■■■■□ 3.62
TXNDC17-207ENST00000574734 BAZ1AQ9NRL2 1556 aaPredicted RBP37.62■■■■□ 3.61
TXNDC17-207ENST00000574734 NCAPD3P42695 1498 aa37.47■■■■□ 3.59
TXNDC17-207ENST00000574734 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
TXNDC17-207ENST00000574734 SMARCA2P51531 1590 aa37.44■■■■□ 3.58
TXNDC17-207ENST00000574734 MROH2BQ7Z745 1585 aa37.37■■■■□ 3.57
TXNDC17-207ENST00000574734 PEG3Q9GZU2 1588 aa37.28■■■■□ 3.56
TXNDC17-207ENST00000574734 HMGXB3Q12766 1538 aa37.26■■■■□ 3.56
TXNDC17-207ENST00000574734 BAZ1BQ9UIG0 1483 aaKnown RBP37.18■■■■□ 3.54
TXNDC17-207ENST00000574734 WIZO95785 1651 aa36.96■■■■□ 3.51
TXNDC17-207ENST00000574734 RSF1Q96T23 1441 aaPredicted RBP36.93■■■■□ 3.5
TXNDC17-207ENST00000574734 TOP2AP11388 1531 aaKnown RBP36.58■■■■□ 3.45
TXNDC17-207ENST00000574734 NESP48681 1621 aa36.57■■■■□ 3.44
TXNDC17-207ENST00000574734 ERCC6Q03468 1493 aa36.5■■■■□ 3.43
TXNDC17-207ENST00000574734 LAMC3Q9Y6N6 1575 aa36.49■■■■□ 3.43
TXNDC17-207ENST00000574734 CADPSQ9ULU8 1353 aa36.39■■■■□ 3.42
TXNDC17-207ENST00000574734 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
TXNDC17-207ENST00000574734 CCDC88BA6NC98 1476 aa36.16■■■■□ 3.38
TXNDC17-207ENST00000574734 CFTRP13569 1480 aa36.14■■■■□ 3.38
TXNDC17-207ENST00000574734 KIF21AQ7Z4S6 1674 aa36.13■■■■□ 3.37
TXNDC17-207ENST00000574734 CUX2O14529 1486 aa36.11■■■■□ 3.37
TXNDC17-207ENST00000574734 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
TXNDC17-207ENST00000574734 SUPT5HO00267 1087 aaKnown RBP35.99■■■■□ 3.35
TXNDC17-207ENST00000574734 FANCD2Q9BXW9 1451 aa35.96■■■■□ 3.35
TXNDC17-207ENST00000574734 CEP164Q9UPV0 1460 aa35.92■■■■□ 3.34
TXNDC17-207ENST00000574734 MRC2Q9UBG0 1479 aa35.88■■■■□ 3.33
TXNDC17-207ENST00000574734 PRDM2Q13029 1718 aa35.85■■■■□ 3.33
TXNDC17-207ENST00000574734 WDR62O43379 1518 aa35.75■■■■□ 3.31
TXNDC17-207ENST00000574734 URB2Q14146 1524 aaKnown RBP35.58■■■■□ 3.29
TXNDC17-207ENST00000574734 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
TXNDC17-207ENST00000574734 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
TXNDC17-207ENST00000574734 DNMBPQ6XZF7 1577 aa35.32■■■■□ 3.24
TXNDC17-207ENST00000574734 IFT140Q96RY7 1462 aa35.18■■■■□ 3.22
TXNDC17-207ENST00000574734 DNAJC5Q9H3Z4 198 aa35.12■■■■□ 3.21
TXNDC17-207ENST00000574734 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
TXNDC17-207ENST00000574734 CUX1P39880 1505 aa35.06■■■■□ 3.2
TXNDC17-207ENST00000574734 ZNF608Q9ULD9 1512 aaPredicted RBP35■■■■□ 3.19
TXNDC17-207ENST00000574734 TARBP1Q13395 1621 aaKnown RBP34.98■■■■□ 3.19
TXNDC17-207ENST00000574734 FGD5Q6ZNL6 1462 aa34.97■■■■□ 3.19
TXNDC17-207ENST00000574734 SOGA1O94964 1423 aa34.95■■■■□ 3.19
TXNDC17-207ENST00000574734 RAD54L2Q9Y4B4 1467 aa34.9■■■■□ 3.18
TXNDC17-207ENST00000574734 EIF4G3O43432 1585 aaKnown RBP34.86■■■■□ 3.17
TXNDC17-207ENST00000574734 WRNQ14191 1432 aaPredicted RBP eCLIP34.84■■■■□ 3.17
TXNDC17-207ENST00000574734 AQRO60306 1485 aaKnown RBP eCLIP34.82■■■■□ 3.16
TXNDC17-207ENST00000574734 TOP2BQ02880 1626 aa34.76■■■■□ 3.15
TXNDC17-207ENST00000574734 TDRD9Q8NDG6 1382 aaKnown RBP34.75■■■■□ 3.15
TXNDC17-207ENST00000574734 BIVM-ERCC5R4GMW8 1640 aa34.74■■■■□ 3.15
TXNDC17-207ENST00000574734 SYNJ1O43426 1573 aa34.73■■■■□ 3.15
TXNDC17-207ENST00000574734 WDR97A6NE52 1622 aa34.72■■■■□ 3.15
TXNDC17-207ENST00000574734 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
TXNDC17-207ENST00000574734 ABCA10Q8WWZ4 1543 aa34.63■■■■□ 3.13
TXNDC17-207ENST00000574734 GRIN2BQ13224 1484 aa34.54■■■■□ 3.12
TXNDC17-207ENST00000574734 GAPVD1Q14C86 1478 aa34.53■■■■□ 3.12
TXNDC17-207ENST00000574734 SNAPC4Q5SXM2 1469 aa34.48■■■■□ 3.11
TXNDC17-207ENST00000574734 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
TXNDC17-207ENST00000574734 FBLN2P98095 1184 aa34.46■■■■□ 3.11
TXNDC17-207ENST00000574734 MAGI1Q96QZ7 1491 aaPredicted RBP34.46■■■■□ 3.11
TXNDC17-207ENST00000574734 PBRM1Q86U86 1689 aa34.44■■■■□ 3.1
TXNDC17-207ENST00000574734 CHD1O14646 1710 aa34.44■■■■□ 3.1
TXNDC17-207ENST00000574734 CHMP7Q8WUX9 453 aaPredicted RBP34.36■■■■□ 3.09
TXNDC17-207ENST00000574734 SYNJ2O15056 1496 aa34.33■■■■□ 3.09
TXNDC17-207ENST00000574734 ERICH3Q5RHP9 1530 aa34.22■■■■□ 3.07
TXNDC17-207ENST00000574734 ADAMTS12P58397 1594 aa34.16■■■■□ 3.06
TXNDC17-207ENST00000574734 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
TXNDC17-207ENST00000574734 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
TXNDC17-207ENST00000574734 GRIN2AQ12879 1464 aa34.08■■■■□ 3.05
TXNDC17-207ENST00000574734 CLASP1Q7Z460 1538 aa34.06■■■■□ 3.04
TXNDC17-207ENST00000574734 RIMBP3CA6NJZ7 1639 aa34.04■■■■□ 3.04
TXNDC17-207ENST00000574734 RIMBP3BA6NNM3 1639 aa34.04■■■■□ 3.04
TXNDC17-207ENST00000574734 RIMBP3Q9UFD9 1639 aa34.04■■■■□ 3.04
TXNDC17-207ENST00000574734 ARHGEF11O15085 1522 aa34.04■■■■□ 3.04
TXNDC17-207ENST00000574734 TRIM41Q8WV44 630 aa34.01■■■■□ 3.03
TXNDC17-207ENST00000574734 IGF1RP08069 1367 aa33.99■■■■□ 3.03
TXNDC17-207ENST00000574734 NUP160Q12769 1436 aa33.93■■■■□ 3.02
TXNDC17-207ENST00000574734 CUL7Q14999 1698 aa33.9■■■■□ 3.02
TXNDC17-207ENST00000574734 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
TXNDC17-207ENST00000574734 CARMIL1Q5VZK9 1371 aa33.8■■■■□ 3
TXNDC17-207ENST00000574734 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
TXNDC17-207ENST00000574734 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
TXNDC17-207ENST00000574734 ARAP1Q96P48 1450 aa33.76■■■□□ 2.99
TXNDC17-207ENST00000574734 SHROOM2Q13796 1616 aa33.68■■■□□ 2.98
TXNDC17-207ENST00000574734 JPH4Q96JJ6 628 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms