RNA–Protein interactions for RNA: ENST00000574340.1

SRRM2-219, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 579 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-219ENST00000574340 NISCHQ9Y2I1 1504 aa42.88■■■■■ 4.46
SRRM2-219ENST00000574340 ABCC9O60706 1549 aa38.94■■■■□ 3.82
SRRM2-219ENST00000574340 CCDC180Q9P1Z9 1646 aa38.49■■■■□ 3.75
SRRM2-219ENST00000574340 DNAJC5BQ9UF47 199 aa36.96■■■■□ 3.51
SRRM2-219ENST00000574340 RB1CC1Q8TDY2 1594 aa36.8■■■■□ 3.48
SRRM2-219ENST00000574340 NACADO15069 1562 aa36.5■■■■□ 3.43
SRRM2-219ENST00000574340 DCAF8L2P0C7V8 631 aa36.3■■■■□ 3.4
SRRM2-219ENST00000574340 PABPN1Q86U42 306 aaKnown RBP eCLIP36.26■■■■□ 3.4
SRRM2-219ENST00000574340 UNC13AQ9UPW8 1703 aa36■■■■□ 3.35
SRRM2-219ENST00000574340 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
SRRM2-219ENST00000574340 BICRAQ9NZM4 1560 aa35.89■■■■□ 3.34
SRRM2-219ENST00000574340 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
SRRM2-219ENST00000574340 DCAF1Q9Y4B6 1507 aa35.36■■■■□ 3.25
SRRM2-219ENST00000574340 SHROOM4Q9ULL8 1493 aa35.22■■■■□ 3.23
SRRM2-219ENST00000574340 SCRIBQ14160 1630 aa35.14■■■■□ 3.22
SRRM2-219ENST00000574340 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
SRRM2-219ENST00000574340 CECR2Q9BXF3 1484 aa35.08■■■■□ 3.21
SRRM2-219ENST00000574340 EIF4G1Q04637 1599 aaKnown RBP34.97■■■■□ 3.19
SRRM2-219ENST00000574340 DNAJC5Q9H3Z4 198 aa34.04■■■■□ 3.04
SRRM2-219ENST00000574340 NCAPD3P42695 1498 aa33.79■■■■□ 3
SRRM2-219ENST00000574340 ATAD2BQ9ULI0 1458 aa33.65■■■□□ 2.98
SRRM2-219ENST00000574340 CUX2O14529 1486 aa33.61■■■□□ 2.97
SRRM2-219ENST00000574340 ERCC6Q03468 1493 aa33.54■■■□□ 2.96
SRRM2-219ENST00000574340 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
SRRM2-219ENST00000574340 HMGXB3Q12766 1538 aa33.44■■■□□ 2.94
SRRM2-219ENST00000574340 SMARCA2P51531 1590 aa33.43■■■□□ 2.94
SRRM2-219ENST00000574340 NESP48681 1621 aa33.41■■■□□ 2.94
SRRM2-219ENST00000574340 BAZ1AQ9NRL2 1556 aaPredicted RBP33.24■■■□□ 2.91
SRRM2-219ENST00000574340 BAZ1BQ9UIG0 1483 aaKnown RBP33.24■■■□□ 2.91
SRRM2-219ENST00000574340 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
SRRM2-219ENST00000574340 MROH2BQ7Z745 1585 aa33.09■■■□□ 2.89
SRRM2-219ENST00000574340 THOC2Q8NI27 1593 aaKnown RBP33.05■■■□□ 2.88
SRRM2-219ENST00000574340 LAMC3Q9Y6N6 1575 aa32.98■■■□□ 2.87
SRRM2-219ENST00000574340 KIF21AQ7Z4S6 1674 aa32.85■■■□□ 2.85
SRRM2-219ENST00000574340 PDS5BQ9NTI5 1447 aa32.82■■■□□ 2.84
SRRM2-219ENST00000574340 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
SRRM2-219ENST00000574340 WIZO95785 1651 aa32.62■■■□□ 2.81
SRRM2-219ENST00000574340 MRC2Q9UBG0 1479 aa32.58■■■□□ 2.81
SRRM2-219ENST00000574340 WDR62O43379 1518 aa32.52■■■□□ 2.8
SRRM2-219ENST00000574340 TRIM41Q8WV44 630 aa32.37■■■□□ 2.77
SRRM2-219ENST00000574340 CEP164Q9UPV0 1460 aa32.36■■■□□ 2.77
SRRM2-219ENST00000574340 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
SRRM2-219ENST00000574340 CFTRP13569 1480 aa32.31■■■□□ 2.76
SRRM2-219ENST00000574340 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
SRRM2-219ENST00000574340 TOP2AP11388 1531 aaKnown RBP32.16■■■□□ 2.74
SRRM2-219ENST00000574340 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
SRRM2-219ENST00000574340 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
SRRM2-219ENST00000574340 OSCARQ8IYS5 282 aa32.05■■■□□ 2.72
SRRM2-219ENST00000574340 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
SRRM2-219ENST00000574340 ZNF608Q9ULD9 1512 aaPredicted RBP31.83■■■□□ 2.69
SRRM2-219ENST00000574340 PRDM2Q13029 1718 aa31.78■■■□□ 2.68
SRRM2-219ENST00000574340 IFT140Q96RY7 1462 aa31.75■■■□□ 2.67
SRRM2-219ENST00000574340 TOPBP1Q92547 1522 aa31.71■■■□□ 2.67
SRRM2-219ENST00000574340 RIMBP3CA6NJZ7 1639 aa31.67■■■□□ 2.66
SRRM2-219ENST00000574340 RIMBP3BA6NNM3 1639 aa31.67■■■□□ 2.66
SRRM2-219ENST00000574340 RIMBP3Q9UFD9 1639 aa31.67■■■□□ 2.66
SRRM2-219ENST00000574340 ARHGEF11O15085 1522 aa31.55■■■□□ 2.64
SRRM2-219ENST00000574340 EIF4G3O43432 1585 aaKnown RBP31.53■■■□□ 2.64
SRRM2-219ENST00000574340 ABCC8Q09428 1581 aa31.51■■■□□ 2.64
SRRM2-219ENST00000574340 DNMBPQ6XZF7 1577 aa31.51■■■□□ 2.64
SRRM2-219ENST00000574340 AQRO60306 1485 aaKnown RBP eCLIP31.49■■■□□ 2.631e-7■■□□□ 14
SRRM2-219ENST00000574340 TARBP1Q13395 1621 aaKnown RBP31.46■■■□□ 2.63
SRRM2-219ENST00000574340 POLA1P09884 1462 aaPredicted RBP31.38■■■□□ 2.61
SRRM2-219ENST00000574340 CYB5RLQ6IPT4 315 aa31.36■■■□□ 2.61
SRRM2-219ENST00000574340 CHD1O14646 1710 aa31.32■■■□□ 2.61
SRRM2-219ENST00000574340 RAD54L2Q9Y4B4 1467 aa31.32■■■□□ 2.6
SRRM2-219ENST00000574340 ARAP1Q96P48 1450 aa31.27■■■□□ 2.6
SRRM2-219ENST00000574340 FBLN2P98095 1184 aa31.26■■■□□ 2.59
SRRM2-219ENST00000574340 TDRD9Q8NDG6 1382 aaKnown RBP31.25■■■□□ 2.59
SRRM2-219ENST00000574340 SOGA1O94964 1423 aa31.22■■■□□ 2.59
SRRM2-219ENST00000574340 FGD5Q6ZNL6 1462 aa31.13■■■□□ 2.57
SRRM2-219ENST00000574340 SNAPC4Q5SXM2 1469 aa31.11■■■□□ 2.57
SRRM2-219ENST00000574340 CUX1P39880 1505 aa31.09■■■□□ 2.57
SRRM2-219ENST00000574340 TRHP20396 242 aaPredicted RBP31.05■■■□□ 2.56
SRRM2-219ENST00000574340 CLASP1Q7Z460 1538 aa31.04■■■□□ 2.56
SRRM2-219ENST00000574340 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
SRRM2-219ENST00000574340 CHMP7Q8WUX9 453 aaPredicted RBP30.98■■■□□ 2.55
SRRM2-219ENST00000574340 MAGI1Q96QZ7 1491 aaPredicted RBP30.96■■■□□ 2.55
SRRM2-219ENST00000574340 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
SRRM2-219ENST00000574340 SYNJ2O15056 1496 aa30.89■■■□□ 2.54
SRRM2-219ENST00000574340 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
SRRM2-219ENST00000574340 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
SRRM2-219ENST00000574340 GAPVD1Q14C86 1478 aa30.82■■■□□ 2.52
SRRM2-219ENST00000574340 ABCA10Q8WWZ4 1543 aa30.75■■■□□ 2.51
SRRM2-219ENST00000574340 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
SRRM2-219ENST00000574340 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
SRRM2-219ENST00000574340 ERCC6L2Q5T890 1561 aa30.61■■■□□ 2.49
SRRM2-219ENST00000574340 GRIN2AQ12879 1464 aa30.57■■■□□ 2.48
SRRM2-219ENST00000574340 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
SRRM2-219ENST00000574340 NUP160Q12769 1436 aa30.52■■■□□ 2.48
SRRM2-219ENST00000574340 CEP170Q5SW79 1584 aa30.51■■■□□ 2.47
SRRM2-219ENST00000574340 ADAMTS12P58397 1594 aa30.5■■■□□ 2.47
SRRM2-219ENST00000574340 TOP2BQ02880 1626 aa30.44■■■□□ 2.46
SRRM2-219ENST00000574340 BIVM-ERCC5R4GMW8 1640 aa30.42■■■□□ 2.46
SRRM2-219ENST00000574340 FHAD1B1AJZ9 1412 aa30.41■■■□□ 2.46
SRRM2-219ENST00000574340 SHROOM2Q13796 1616 aa30.37■■■□□ 2.45
SRRM2-219ENST00000574340 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
SRRM2-219ENST00000574340 AEBP2Q6ZN18 517 aaPredicted RBP30.29■■■□□ 2.44
SRRM2-219ENST00000574340 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
SRRM2-219ENST00000574340 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms