RNA–Protein interactions for RNA: ENST00000574333.1

PKMYT1-212, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 3

Gene PKMYT1, Length 479 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-212ENST00000574333 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
PKMYT1-212ENST00000574333 ABCC9O60706 1549 aa32.83■■■□□ 2.85
PKMYT1-212ENST00000574333 CCDC180Q9P1Z9 1646 aa32.68■■■□□ 2.82
PKMYT1-212ENST00000574333 RB1CC1Q8TDY2 1594 aa31.18■■■□□ 2.58
PKMYT1-212ENST00000574333 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
PKMYT1-212ENST00000574333 NACADO15069 1562 aa30.96■■■□□ 2.55
PKMYT1-212ENST00000574333 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
PKMYT1-212ENST00000574333 MYO15BQ96JP2 1530 aa30.53■■■□□ 2.48
PKMYT1-212ENST00000574333 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
PKMYT1-212ENST00000574333 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
PKMYT1-212ENST00000574333 BICRAQ9NZM4 1560 aa30.34■■■□□ 2.45
PKMYT1-212ENST00000574333 ZCCHC6Q5VYS8 1495 aaKnown RBP30.09■■■□□ 2.41
PKMYT1-212ENST00000574333 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
PKMYT1-212ENST00000574333 SHROOM4Q9ULL8 1493 aa29.93■■■□□ 2.38
PKMYT1-212ENST00000574333 SCRIBQ14160 1630 aa29.71■■■□□ 2.35
PKMYT1-212ENST00000574333 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
PKMYT1-212ENST00000574333 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
PKMYT1-212ENST00000574333 EIF4G1Q04637 1599 aaKnown RBP29.59■■■□□ 2.33
PKMYT1-212ENST00000574333 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
PKMYT1-212ENST00000574333 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
PKMYT1-212ENST00000574333 ATAD2BQ9ULI0 1458 aa28.47■■■□□ 2.15
PKMYT1-212ENST00000574333 CUX2O14529 1486 aa28.43■■■□□ 2.14
PKMYT1-212ENST00000574333 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
PKMYT1-212ENST00000574333 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
PKMYT1-212ENST00000574333 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
PKMYT1-212ENST00000574333 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
PKMYT1-212ENST00000574333 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
PKMYT1-212ENST00000574333 NESP48681 1621 aa28.18■■■□□ 2.1
PKMYT1-212ENST00000574333 PEG3Q9GZU2 1588 aa28.16■■■□□ 2.1
PKMYT1-212ENST00000574333 BAZ1BQ9UIG0 1483 aaKnown RBP28.15■■■□□ 2.1
PKMYT1-212ENST00000574333 MROH2BQ7Z745 1585 aa27.99■■■□□ 2.07
PKMYT1-212ENST00000574333 LAMC3Q9Y6N6 1575 aa27.96■■■□□ 2.07
PKMYT1-212ENST00000574333 THOC2Q8NI27 1593 aaKnown RBP27.94■■■□□ 2.06
PKMYT1-212ENST00000574333 PDS5BQ9NTI5 1447 aa27.79■■■□□ 2.04
PKMYT1-212ENST00000574333 KIF21AQ7Z4S6 1674 aa27.77■■■□□ 2.04
PKMYT1-212ENST00000574333 CADPSQ9ULU8 1353 aa27.7■■■□□ 2.02
PKMYT1-212ENST00000574333 WIZO95785 1651 aa27.61■■■□□ 2.01
PKMYT1-212ENST00000574333 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
PKMYT1-212ENST00000574333 WDR62O43379 1518 aa27.53■■■□□ 2
PKMYT1-212ENST00000574333 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
PKMYT1-212ENST00000574333 CFTRP13569 1480 aa27.37■■□□□ 1.97
PKMYT1-212ENST00000574333 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
PKMYT1-212ENST00000574333 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
PKMYT1-212ENST00000574333 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
PKMYT1-212ENST00000574333 TRIM41Q8WV44 630 aa27.19■■□□□ 1.94
PKMYT1-212ENST00000574333 URB2Q14146 1524 aaKnown RBP27.18■■□□□ 1.94
PKMYT1-212ENST00000574333 OSCARQ8IYS5 282 aa27.06■■□□□ 1.92
PKMYT1-212ENST00000574333 PRDM2Q13029 1718 aa26.99■■□□□ 1.91
PKMYT1-212ENST00000574333 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
PKMYT1-212ENST00000574333 IFT140Q96RY7 1462 aa26.88■■□□□ 1.89
PKMYT1-212ENST00000574333 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
PKMYT1-212ENST00000574333 TOPBP1Q92547 1522 aa26.83■■□□□ 1.89
PKMYT1-212ENST00000574333 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
PKMYT1-212ENST00000574333 RIMBP3CA6NJZ7 1639 aa26.73■■□□□ 1.87
PKMYT1-212ENST00000574333 RIMBP3BA6NNM3 1639 aa26.73■■□□□ 1.87
PKMYT1-212ENST00000574333 RIMBP3Q9UFD9 1639 aa26.73■■□□□ 1.87
PKMYT1-212ENST00000574333 DNMBPQ6XZF7 1577 aa26.71■■□□□ 1.87
PKMYT1-212ENST00000574333 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
PKMYT1-212ENST00000574333 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
PKMYT1-212ENST00000574333 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
PKMYT1-212ENST00000574333 AQRO60306 1485 aaKnown RBP eCLIP26.57■■□□□ 1.848e-25■■■■□ 20.8
PKMYT1-212ENST00000574333 POLA1P09884 1462 aaPredicted RBP26.55■■□□□ 1.84
PKMYT1-212ENST00000574333 CHD1O14646 1710 aa26.49■■□□□ 1.83
PKMYT1-212ENST00000574333 RAD54L2Q9Y4B4 1467 aa26.43■■□□□ 1.82
PKMYT1-212ENST00000574333 CYB5RLQ6IPT4 315 aa26.41■■□□□ 1.82
PKMYT1-212ENST00000574333 SOGA1O94964 1423 aa26.4■■□□□ 1.82
PKMYT1-212ENST00000574333 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
PKMYT1-212ENST00000574333 TDRD9Q8NDG6 1382 aaKnown RBP26.38■■□□□ 1.81
PKMYT1-212ENST00000574333 FBLN2P98095 1184 aa26.36■■□□□ 1.81
PKMYT1-212ENST00000574333 WDR97A6NE52 1622 aa26.35■■□□□ 1.81
PKMYT1-212ENST00000574333 FGD5Q6ZNL6 1462 aa26.35■■□□□ 1.81
PKMYT1-212ENST00000574333 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
PKMYT1-212ENST00000574333 CUX1P39880 1505 aa26.3■■□□□ 1.8
PKMYT1-212ENST00000574333 CLASP1Q7Z460 1538 aa26.26■■□□□ 1.79
PKMYT1-212ENST00000574333 MAGI1Q96QZ7 1491 aaPredicted RBP26.24■■□□□ 1.79
PKMYT1-212ENST00000574333 GRIN2BQ13224 1484 aa26.22■■□□□ 1.79
PKMYT1-212ENST00000574333 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
PKMYT1-212ENST00000574333 SYNJ1O43426 1573 aa26.17■■□□□ 1.78
PKMYT1-212ENST00000574333 SYNJ2O15056 1496 aa26.16■■□□□ 1.78
PKMYT1-212ENST00000574333 TRHP20396 242 aaPredicted RBP26.14■■□□□ 1.78
PKMYT1-212ENST00000574333 GAPVD1Q14C86 1478 aa26.09■■□□□ 1.77
PKMYT1-212ENST00000574333 ABCA10Q8WWZ4 1543 aa26.06■■□□□ 1.76
PKMYT1-212ENST00000574333 PBRM1Q86U86 1689 aa26.05■■□□□ 1.76
PKMYT1-212ENST00000574333 ABCA5Q8WWZ7 1642 aa26.03■■□□□ 1.76
PKMYT1-212ENST00000574333 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
PKMYT1-212ENST00000574333 GRIN2AQ12879 1464 aa25.88■■□□□ 1.73
PKMYT1-212ENST00000574333 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
PKMYT1-212ENST00000574333 ADAMTS12P58397 1594 aa25.84■■□□□ 1.73
PKMYT1-212ENST00000574333 NUP160Q12769 1436 aa25.84■■□□□ 1.73
PKMYT1-212ENST00000574333 TOP2BQ02880 1626 aa25.82■■□□□ 1.72
PKMYT1-212ENST00000574333 BIVM-ERCC5R4GMW8 1640 aa25.82■■□□□ 1.72
PKMYT1-212ENST00000574333 ERCC6L2Q5T890 1561 aa25.81■■□□□ 1.72
PKMYT1-212ENST00000574333 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
PKMYT1-212ENST00000574333 FHAD1B1AJZ9 1412 aa25.77■■□□□ 1.72
PKMYT1-212ENST00000574333 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
PKMYT1-212ENST00000574333 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
PKMYT1-212ENST00000574333 PRG4Q92954 1404 aaPredicted RBP25.55■■□□□ 1.68
PKMYT1-212ENST00000574333 JPH4Q96JJ6 628 aa25.52■■□□□ 1.68
PKMYT1-212ENST00000574333 AEBP2Q6ZN18 517 aaPredicted RBP25.5■■□□□ 1.67
PKMYT1-212ENST00000574333 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms