RNA–Protein interactions for RNA: ENST00000574048.2

ABR-224, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-224ENST00000574048 NISCHQ9Y2I1 1504 aa40.57■■■■■ 4.08
ABR-224ENST00000574048 ABCC9O60706 1549 aa36.62■■■■□ 3.45
ABR-224ENST00000574048 CCDC180Q9P1Z9 1646 aa36.52■■■■□ 3.44
ABR-224ENST00000574048 RB1CC1Q8TDY2 1594 aa34.82■■■■□ 3.16
ABR-224ENST00000574048 NACADO15069 1562 aa34.55■■■■□ 3.12
ABR-224ENST00000574048 DNAJC5BQ9UF47 199 aa34.52■■■■□ 3.12
ABR-224ENST00000574048 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
ABR-224ENST00000574048 UNC13AQ9UPW8 1703 aa34.05■■■■□ 3.04
ABR-224ENST00000574048 PABPN1Q86U42 306 aaKnown RBP eCLIP34.04■■■■□ 3.04
ABR-224ENST00000574048 MYO15BQ96JP2 1530 aa34.04■■■■□ 3.04
ABR-224ENST00000574048 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
ABR-224ENST00000574048 ZCCHC6Q5VYS8 1495 aaKnown RBP33.57■■■□□ 2.97
ABR-224ENST00000574048 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
ABR-224ENST00000574048 SHROOM4Q9ULL8 1493 aa33.37■■■□□ 2.93
ABR-224ENST00000574048 SCRIBQ14160 1630 aa33.2■■■□□ 2.9
ABR-224ENST00000574048 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
ABR-224ENST00000574048 CECR2Q9BXF3 1484 aa33.02■■■□□ 2.88
ABR-224ENST00000574048 EIF4G1Q04637 1599 aaKnown RBP32.99■■■□□ 2.87
ABR-224ENST00000574048 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
ABR-224ENST00000574048 DNAJC5Q9H3Z4 198 aa31.86■■■□□ 2.69
ABR-224ENST00000574048 ATAD2BQ9ULI0 1458 aa31.76■■■□□ 2.67
ABR-224ENST00000574048 SMARCA4P51532 1647 aa31.68■■■□□ 2.66
ABR-224ENST00000574048 CUX2O14529 1486 aa31.67■■■□□ 2.66
ABR-224ENST00000574048 SMARCA2P51531 1590 aa31.67■■■□□ 2.66
ABR-224ENST00000574048 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
ABR-224ENST00000574048 ERCC6Q03468 1493 aa31.63■■■□□ 2.65
ABR-224ENST00000574048 BAZ1AQ9NRL2 1556 aaPredicted RBP31.5■■■□□ 2.63
ABR-224ENST00000574048 BAZ1BQ9UIG0 1483 aaKnown RBP31.42■■■□□ 2.62
ABR-224ENST00000574048 NESP48681 1621 aa31.41■■■□□ 2.62
ABR-224ENST00000574048 PEG3Q9GZU2 1588 aa31.4■■■□□ 2.62
ABR-224ENST00000574048 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
ABR-224ENST00000574048 LAMC3Q9Y6N6 1575 aa31.2■■■□□ 2.58
ABR-224ENST00000574048 THOC2Q8NI27 1593 aaKnown RBP31.16■■■□□ 2.58
ABR-224ENST00000574048 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
ABR-224ENST00000574048 PDS5BQ9NTI5 1447 aa31.01■■■□□ 2.55
ABR-224ENST00000574048 CADPSQ9ULU8 1353 aa30.9■■■□□ 2.54
ABR-224ENST00000574048 WIZO95785 1651 aa30.86■■■□□ 2.53
ABR-224ENST00000574048 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
ABR-224ENST00000574048 WDR62O43379 1518 aa30.69■■■□□ 2.5
ABR-224ENST00000574048 CEP164Q9UPV0 1460 aa30.58■■■□□ 2.49
ABR-224ENST00000574048 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
ABR-224ENST00000574048 RSF1Q96T23 1441 aaPredicted RBP30.53■■■□□ 2.48
ABR-224ENST00000574048 CFTRP13569 1480 aa30.52■■■□□ 2.48
ABR-224ENST00000574048 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
ABR-224ENST00000574048 TRIM41Q8WV44 630 aa30.32■■■□□ 2.44
ABR-224ENST00000574048 URB2Q14146 1524 aaKnown RBP30.31■■■□□ 2.44
ABR-224ENST00000574048 PRDM2Q13029 1718 aa30.24■■■□□ 2.43
ABR-224ENST00000574048 OSCARQ8IYS5 282 aa30.18■■■□□ 2.42
ABR-224ENST00000574048 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
ABR-224ENST00000574048 IFT140Q96RY7 1462 aa29.99■■■□□ 2.39
ABR-224ENST00000574048 TOPBP1Q92547 1522 aa29.95■■■□□ 2.38
ABR-224ENST00000574048 ZNF608Q9ULD9 1512 aaPredicted RBP29.95■■■□□ 2.38
ABR-224ENST00000574048 ABCC8Q09428 1581 aa29.9■■■□□ 2.38
ABR-224ENST00000574048 DNMBPQ6XZF7 1577 aa29.83■■■□□ 2.37
ABR-224ENST00000574048 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
ABR-224ENST00000574048 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
ABR-224ENST00000574048 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
ABR-224ENST00000574048 EIF4G3O43432 1585 aaKnown RBP29.78■■■□□ 2.36
ABR-224ENST00000574048 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
ABR-224ENST00000574048 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
ABR-224ENST00000574048 AQRO60306 1485 aaKnown RBP eCLIP29.66■■■□□ 2.34
ABR-224ENST00000574048 POLA1P09884 1462 aaPredicted RBP29.62■■■□□ 2.33
ABR-224ENST00000574048 CHD1O14646 1710 aa29.61■■■□□ 2.33
ABR-224ENST00000574048 RAD54L2Q9Y4B4 1467 aa29.5■■■□□ 2.31
ABR-224ENST00000574048 SOGA1O94964 1423 aa29.48■■■□□ 2.31
ABR-224ENST00000574048 FBLN2P98095 1184 aa29.46■■■□□ 2.31
ABR-224ENST00000574048 CYB5RLQ6IPT4 315 aa29.46■■■□□ 2.31
ABR-224ENST00000574048 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
ABR-224ENST00000574048 WDR97A6NE52 1622 aa29.42■■■□□ 2.3
ABR-224ENST00000574048 FGD5Q6ZNL6 1462 aa29.41■■■□□ 2.3
ABR-224ENST00000574048 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
ABR-224ENST00000574048 CUX1P39880 1505 aa29.36■■■□□ 2.29
ABR-224ENST00000574048 SNAPC4Q5SXM2 1469 aa29.34■■■□□ 2.29
ABR-224ENST00000574048 MAGI1Q96QZ7 1491 aaPredicted RBP29.29■■■□□ 2.28
ABR-224ENST00000574048 CLASP1Q7Z460 1538 aa29.27■■■□□ 2.28
ABR-224ENST00000574048 GRIN2BQ13224 1484 aa29.25■■■□□ 2.27
ABR-224ENST00000574048 CHMP7Q8WUX9 453 aaPredicted RBP29.24■■■□□ 2.27
ABR-224ENST00000574048 SYNJ1O43426 1573 aa29.22■■■□□ 2.27
ABR-224ENST00000574048 SYNJ2O15056 1496 aa29.19■■■□□ 2.26
ABR-224ENST00000574048 TRHP20396 242 aaPredicted RBP29.18■■■□□ 2.26
ABR-224ENST00000574048 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
ABR-224ENST00000574048 GAPVD1Q14C86 1478 aa29.13■■■□□ 2.25
ABR-224ENST00000574048 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
ABR-224ENST00000574048 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
ABR-224ENST00000574048 SUPT5HO00267 1087 aaKnown RBP28.98■■■□□ 2.23
ABR-224ENST00000574048 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
ABR-224ENST00000574048 GRIN2AQ12879 1464 aa28.88■■■□□ 2.21
ABR-224ENST00000574048 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
ABR-224ENST00000574048 TOP2BQ02880 1626 aa28.86■■■□□ 2.21
ABR-224ENST00000574048 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
ABR-224ENST00000574048 NUP160Q12769 1436 aa28.8■■■□□ 2.2
ABR-224ENST00000574048 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
ABR-224ENST00000574048 ERCC6L2Q5T890 1561 aa28.78■■■□□ 2.2
ABR-224ENST00000574048 FHAD1B1AJZ9 1412 aa28.76■■■□□ 2.19
ABR-224ENST00000574048 ERICH3Q5RHP9 1530 aa28.73■■■□□ 2.19
ABR-224ENST00000574048 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
ABR-224ENST00000574048 PRG4Q92954 1404 aaPredicted RBP28.52■■■□□ 2.16
ABR-224ENST00000574048 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
ABR-224ENST00000574048 AEBP2Q6ZN18 517 aaPredicted RBP28.46■■■□□ 2.15
ABR-224ENST00000574048 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms