RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 NISCHQ9Y2I1 1504 aa19.76■□□□□ 0.75
EDC4-207ENST00000573992 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
EDC4-207ENST00000573992 HRCP23327 699 aa18.92■□□□□ 0.62
EDC4-207ENST00000573992 SUPT5HO00267 1087 aaKnown RBP18.83■□□□□ 0.61
EDC4-207ENST00000573992 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
EDC4-207ENST00000573992 MYT1Q01538 1121 aa18.67■□□□□ 0.58
EDC4-207ENST00000573992 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
EDC4-207ENST00000573992 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
EDC4-207ENST00000573992 ZEB1P37275 1124 aaPredicted RBP18.27■□□□□ 0.51
EDC4-207ENST00000573992 CENPBP07199 599 aaPredicted RBP18.08■□□□□ 0.48
EDC4-207ENST00000573992 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
EDC4-207ENST00000573992 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
EDC4-207ENST00000573992 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
EDC4-207ENST00000573992 SCAF1Q9H7N4 1312 aaKnown RBP17.86■□□□□ 0.45
EDC4-207ENST00000573992 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
EDC4-207ENST00000573992 GTF3C3Q9Y5Q9 886 aa17.68■□□□□ 0.42
EDC4-207ENST00000573992 ACIN1Q9UKV3 1341 aaKnown RBP17.67■□□□□ 0.42
EDC4-207ENST00000573992 CCER1Q8TC90 406 aaPredicted RBP17.66■□□□□ 0.42
EDC4-207ENST00000573992 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
EDC4-207ENST00000573992 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
EDC4-207ENST00000573992 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
EDC4-207ENST00000573992 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
EDC4-207ENST00000573992 MYO15BQ96JP2 1530 aa17.48■□□□□ 0.39
EDC4-207ENST00000573992 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
EDC4-207ENST00000573992 NEUROD1Q13562 356 aa17.47■□□□□ 0.39
EDC4-207ENST00000573992 TRIM41Q8WV44 630 aa17.37■□□□□ 0.37
EDC4-207ENST00000573992 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
EDC4-207ENST00000573992 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
EDC4-207ENST00000573992 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
EDC4-207ENST00000573992 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
EDC4-207ENST00000573992 ZNF316A6NFI3 1004 aaPredicted RBP17.02■□□□□ 0.31
EDC4-207ENST00000573992 NEFLP07196 543 aa16.92■□□□□ 0.3
EDC4-207ENST00000573992 BCL11AQ9H165 835 aa16.9■□□□□ 0.3
EDC4-207ENST00000573992 APLP2Q06481 763 aa16.88■□□□□ 0.29
EDC4-207ENST00000573992 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
EDC4-207ENST00000573992 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
EDC4-207ENST00000573992 MIER1Q8N108 512 aa16.75■□□□□ 0.27
EDC4-207ENST00000573992 HNRNPUL2Q1KMD3 747 aaKnown RBP16.72■□□□□ 0.27
EDC4-207ENST00000573992 BCANQ96GW7 911 aa16.72■□□□□ 0.27
EDC4-207ENST00000573992 UBTFP17480 764 aaKnown RBP16.71■□□□□ 0.27
EDC4-207ENST00000573992 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
EDC4-207ENST00000573992 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
EDC4-207ENST00000573992 ABCC9O60706 1549 aa16.53■□□□□ 0.24
EDC4-207ENST00000573992 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
EDC4-207ENST00000573992 FKBP8Q14318 412 aa16.48■□□□□ 0.23
EDC4-207ENST00000573992 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
EDC4-207ENST00000573992 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
EDC4-207ENST00000573992 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
EDC4-207ENST00000573992 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.22
EDC4-207ENST00000573992 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
EDC4-207ENST00000573992 RBM19Q9Y4C8 960 aaKnown RBP16.25■□□□□ 0.19
EDC4-207ENST00000573992 ITGAEP38570 1179 aa16.25■□□□□ 0.19
EDC4-207ENST00000573992 ANP32CO43423 234 aa16.18■□□□□ 0.18
EDC4-207ENST00000573992 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
EDC4-207ENST00000573992 TRIM52Q96A61 297 aa16.12■□□□□ 0.17
EDC4-207ENST00000573992 NBR1Q14596 966 aa16.12■□□□□ 0.17
EDC4-207ENST00000573992 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
EDC4-207ENST00000573992 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
EDC4-207ENST00000573992 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
EDC4-207ENST00000573992 RSF1Q96T23 1441 aaPredicted RBP16.07■□□□□ 0.16
EDC4-207ENST00000573992 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
EDC4-207ENST00000573992 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.15
EDC4-207ENST00000573992 SCRIBQ14160 1630 aa15.99■□□□□ 0.15
EDC4-207ENST00000573992 IRX6P78412 446 aaPredicted RBP15.97■□□□□ 0.15
EDC4-207ENST00000573992 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
EDC4-207ENST00000573992 DAXXQ9UER7 740 aaPredicted RBP15.97■□□□□ 0.15
EDC4-207ENST00000573992 TNIKQ9UKE5 1360 aa15.94■□□□□ 0.14
EDC4-207ENST00000573992 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
EDC4-207ENST00000573992 ATP1B4Q9UN42 357 aaPredicted RBP15.89■□□□□ 0.13
EDC4-207ENST00000573992 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
EDC4-207ENST00000573992 NOP58Q9Y2X3 529 aaKnown RBP15.88■□□□□ 0.13
EDC4-207ENST00000573992 NACADO15069 1562 aa15.88■□□□□ 0.13
EDC4-207ENST00000573992 RTN4Q9NQC3 1192 aaKnown RBP15.87■□□□□ 0.13
EDC4-207ENST00000573992 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
EDC4-207ENST00000573992 FANCIQ9NVI1 1328 aa15.86■□□□□ 0.13
EDC4-207ENST00000573992 KCNH8Q96L42 1107 aa15.84■□□□□ 0.13
EDC4-207ENST00000573992 ERICH6BQ5W0A0 696 aa15.83■□□□□ 0.12
EDC4-207ENST00000573992 NPM2Q86SE8 214 aaKnown RBP15.81■□□□□ 0.12
EDC4-207ENST00000573992 PPP4R2Q9NY27 417 aa15.8■□□□□ 0.12
EDC4-207ENST00000573992 CLIP1P30622 1438 aa15.79■□□□□ 0.12
EDC4-207ENST00000573992 FAM50AQ14320 339 aaKnown RBP15.78■□□□□ 0.12
EDC4-207ENST00000573992 HIRIP3Q9BW71 556 aaPredicted RBP15.78■□□□□ 0.12
EDC4-207ENST00000573992 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.129e-10■■□□□ 14.1
EDC4-207ENST00000573992 ANO8Q9HCE9 1232 aaPredicted RBP15.77■□□□□ 0.12
EDC4-207ENST00000573992 EEA1Q15075 1411 aa15.77■□□□□ 0.11
EDC4-207ENST00000573992 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
EDC4-207ENST00000573992 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
EDC4-207ENST00000573992 CCER2I3L3R5 266 aa15.75■□□□□ 0.11
EDC4-207ENST00000573992 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
EDC4-207ENST00000573992 GLIPR1L2Q4G1C9 344 aa15.73■□□□□ 0.11
EDC4-207ENST00000573992 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
EDC4-207ENST00000573992 MSH5O43196 834 aa15.71■□□□□ 0.11
EDC4-207ENST00000573992 B4GALNT3Q6L9W6 998 aa15.7■□□□□ 0.1
EDC4-207ENST00000573992 FAM9BQ8IZU0 186 aa15.69■□□□□ 0.1
EDC4-207ENST00000573992 POLR3GLQ9BT43 218 aa15.68■□□□□ 0.1
EDC4-207ENST00000573992 SOGA1O94964 1423 aa15.64■□□□□ 0.09
EDC4-207ENST00000573992 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
EDC4-207ENST00000573992 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
EDC4-207ENST00000573992 NEFMP07197 916 aa15.63■□□□□ 0.09
EDC4-207ENST00000573992 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms