RNA–Protein interactions for RNA: ENST00000573850.1

KIAA0556-209, Transcript of KIAA0556, humanhuman

TSL 5

Gene KIAA0556, Length 3,237 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA0556-209ENST00000573850 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
KIAA0556-209ENST00000573850 CCDC180Q9P1Z9 1646 aa20.01■□□□□ 0.79
KIAA0556-209ENST00000573850 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
KIAA0556-209ENST00000573850 SHROOM4Q9ULL8 1493 aa19.6■□□□□ 0.73
KIAA0556-209ENST00000573850 DCAF8L2P0C7V8 631 aa19.53■□□□□ 0.72
KIAA0556-209ENST00000573850 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
KIAA0556-209ENST00000573850 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
KIAA0556-209ENST00000573850 ABCC9O60706 1549 aa18.91■□□□□ 0.62
KIAA0556-209ENST00000573850 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
KIAA0556-209ENST00000573850 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
KIAA0556-209ENST00000573850 HRCP23327 699 aa18.67■□□□□ 0.58
KIAA0556-209ENST00000573850 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
KIAA0556-209ENST00000573850 NACADO15069 1562 aa18.6■□□□□ 0.57
KIAA0556-209ENST00000573850 RB1CC1Q8TDY2 1594 aa18.41■□□□□ 0.54
KIAA0556-209ENST00000573850 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
KIAA0556-209ENST00000573850 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
KIAA0556-209ENST00000573850 RSF1Q96T23 1441 aaPredicted RBP18.26■□□□□ 0.51
KIAA0556-209ENST00000573850 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
KIAA0556-209ENST00000573850 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
KIAA0556-209ENST00000573850 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
KIAA0556-209ENST00000573850 MROH2BQ7Z745 1585 aa18.08■□□□□ 0.49
KIAA0556-209ENST00000573850 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.47
KIAA0556-209ENST00000573850 WIZO95785 1651 aa17.98■□□□□ 0.47
KIAA0556-209ENST00000573850 SCAF1Q9H7N4 1312 aaKnown RBP17.97■□□□□ 0.47
KIAA0556-209ENST00000573850 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
KIAA0556-209ENST00000573850 BICRAQ9NZM4 1560 aa17.87■□□□□ 0.45
KIAA0556-209ENST00000573850 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
KIAA0556-209ENST00000573850 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
KIAA0556-209ENST00000573850 LOC105371045A0A1W2PR82 267 aa17.72■□□□□ 0.43
KIAA0556-209ENST00000573850 TOP2AP11388 1531 aaKnown RBP17.69■□□□□ 0.42
KIAA0556-209ENST00000573850 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
KIAA0556-209ENST00000573850 CCDC88BA6NC98 1476 aa17.6■□□□□ 0.41
KIAA0556-209ENST00000573850 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
KIAA0556-209ENST00000573850 EIF4G1Q04637 1599 aaKnown RBP17.5■□□□□ 0.39
KIAA0556-209ENST00000573850 EHMT2Q96KQ7 1210 aa17.49■□□□□ 0.39
KIAA0556-209ENST00000573850 PEG3Q9GZU2 1588 aa17.48■□□□□ 0.39
KIAA0556-209ENST00000573850 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
KIAA0556-209ENST00000573850 TRIM26Q12899 539 aaPredicted RBP17.43■□□□□ 0.38
KIAA0556-209ENST00000573850 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
KIAA0556-209ENST00000573850 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
KIAA0556-209ENST00000573850 MYT1Q01538 1121 aa17.42■□□□□ 0.38
KIAA0556-209ENST00000573850 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
KIAA0556-209ENST00000573850 GTF3C3Q9Y5Q9 886 aa17.32■□□□□ 0.36
KIAA0556-209ENST00000573850 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
KIAA0556-209ENST00000573850 ZEB1P37275 1124 aaPredicted RBP17.23■□□□□ 0.35
KIAA0556-209ENST00000573850 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
KIAA0556-209ENST00000573850 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
KIAA0556-209ENST00000573850 SOGA1O94964 1423 aa17.18■□□□□ 0.34
KIAA0556-209ENST00000573850 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
KIAA0556-209ENST00000573850 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
KIAA0556-209ENST00000573850 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
KIAA0556-209ENST00000573850 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
KIAA0556-209ENST00000573850 EEA1Q15075 1411 aa17.03■□□□□ 0.32
KIAA0556-209ENST00000573850 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.31
KIAA0556-209ENST00000573850 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
KIAA0556-209ENST00000573850 CENPBP07199 599 aaPredicted RBP16.98■□□□□ 0.31
KIAA0556-209ENST00000573850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
KIAA0556-209ENST00000573850 YTHDC1Q96MU7 727 aaKnown RBP16.94■□□□□ 0.3
KIAA0556-209ENST00000573850 CFTRP13569 1480 aa16.94■□□□□ 0.3
KIAA0556-209ENST00000573850 TOP2BQ02880 1626 aa16.94■□□□□ 0.3
KIAA0556-209ENST00000573850 DIEXFQ68CQ4 756 aaKnown RBP16.91■□□□□ 0.3
KIAA0556-209ENST00000573850 CEP162Q5TB80 1403 aa16.9■□□□□ 0.3
KIAA0556-209ENST00000573850 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
KIAA0556-209ENST00000573850 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
KIAA0556-209ENST00000573850 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
KIAA0556-209ENST00000573850 CUX1P39880 1505 aa16.86■□□□□ 0.29
KIAA0556-209ENST00000573850 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
KIAA0556-209ENST00000573850 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
KIAA0556-209ENST00000573850 CCER1Q8TC90 406 aaPredicted RBP16.82■□□□□ 0.28
KIAA0556-209ENST00000573850 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
KIAA0556-209ENST00000573850 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
KIAA0556-209ENST00000573850 KIF21BO75037 1637 aa16.8■□□□□ 0.28
KIAA0556-209ENST00000573850 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
KIAA0556-209ENST00000573850 RAPGEF2Q9Y4G8 1499 aa16.78■□□□□ 0.28
KIAA0556-209ENST00000573850 BCL11AQ9H165 835 aa16.72■□□□□ 0.27
KIAA0556-209ENST00000573850 KIF27Q86VH2 1401 aa16.71■□□□□ 0.27
KIAA0556-209ENST00000573850 NESP48681 1621 aa16.7■□□□□ 0.26
KIAA0556-209ENST00000573850 FANCD2Q9BXW9 1451 aa16.7■□□□□ 0.26
KIAA0556-209ENST00000573850 CLIP1P30622 1438 aa16.69■□□□□ 0.26
KIAA0556-209ENST00000573850 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
KIAA0556-209ENST00000573850 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
KIAA0556-209ENST00000573850 CUX2O14529 1486 aa16.64■□□□□ 0.25
KIAA0556-209ENST00000573850 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
KIAA0556-209ENST00000573850 ERICH3Q5RHP9 1530 aa16.61■□□□□ 0.25
KIAA0556-209ENST00000573850 APLP2Q06481 763 aa16.55■□□□□ 0.24
KIAA0556-209ENST00000573850 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
KIAA0556-209ENST00000573850 VPS8Q8N3P4 1428 aa16.55■□□□□ 0.24
KIAA0556-209ENST00000573850 IGF1RP08069 1367 aa16.54■□□□□ 0.24
KIAA0556-209ENST00000573850 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
KIAA0556-209ENST00000573850 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
KIAA0556-209ENST00000573850 MIER1Q8N108 512 aa16.53■□□□□ 0.24
KIAA0556-209ENST00000573850 RAD54L2Q9Y4B4 1467 aa16.53■□□□□ 0.24
KIAA0556-209ENST00000573850 POLA1P09884 1462 aaPredicted RBP16.5■□□□□ 0.23
KIAA0556-209ENST00000573850 CARMIL1Q5VZK9 1371 aa16.49■□□□□ 0.23
KIAA0556-209ENST00000573850 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
KIAA0556-209ENST00000573850 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
KIAA0556-209ENST00000573850 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
KIAA0556-209ENST00000573850 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
KIAA0556-209ENST00000573850 ZNF316A6NFI3 1004 aaPredicted RBP16.44■□□□□ 0.22
KIAA0556-209ENST00000573850 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms