RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
PRPF8-207ENST00000573681 CCDC180Q9P1Z9 1646 aa25.22■■□□□ 1.63
PRPF8-207ENST00000573681 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
PRPF8-207ENST00000573681 DCAF8L2P0C7V8 631 aa24.06■■□□□ 1.44
PRPF8-207ENST00000573681 DCAF1Q9Y4B6 1507 aa24.04■■□□□ 1.44
PRPF8-207ENST00000573681 ABCC9O60706 1549 aa23.89■■□□□ 1.42
PRPF8-207ENST00000573681 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
PRPF8-207ENST00000573681 SHROOM4Q9ULL8 1493 aa23.6■■□□□ 1.37
PRPF8-207ENST00000573681 NACADO15069 1562 aa23.6■■□□□ 1.37
PRPF8-207ENST00000573681 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
PRPF8-207ENST00000573681 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
PRPF8-207ENST00000573681 SUPT5HO00267 1087 aaKnown RBP22.8■■□□□ 1.24
PRPF8-207ENST00000573681 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
PRPF8-207ENST00000573681 PABPN1Q86U42 306 aaKnown RBP eCLIP22.6■■□□□ 1.21
PRPF8-207ENST00000573681 BICRAQ9NZM4 1560 aa22.58■■□□□ 1.2
PRPF8-207ENST00000573681 RSF1Q96T23 1441 aaPredicted RBP22.52■■□□□ 1.2
PRPF8-207ENST00000573681 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
PRPF8-207ENST00000573681 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
PRPF8-207ENST00000573681 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
PRPF8-207ENST00000573681 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
PRPF8-207ENST00000573681 WIZO95785 1651 aa22.11■■□□□ 1.13
PRPF8-207ENST00000573681 PEG3Q9GZU2 1588 aa22■■□□□ 1.11
PRPF8-207ENST00000573681 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
PRPF8-207ENST00000573681 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
PRPF8-207ENST00000573681 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
PRPF8-207ENST00000573681 EIF4G1Q04637 1599 aaKnown RBP21.93■■□□□ 1.1
PRPF8-207ENST00000573681 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
PRPF8-207ENST00000573681 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
PRPF8-207ENST00000573681 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
PRPF8-207ENST00000573681 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
PRPF8-207ENST00000573681 HMGXB3Q12766 1538 aa21.7■■□□□ 1.06
PRPF8-207ENST00000573681 CC2D2AQ9P2K1 1620 aa21.59■■□□□ 1.05
PRPF8-207ENST00000573681 TRIM41Q8WV44 630 aa21.52■■□□□ 1.04
PRPF8-207ENST00000573681 CFTRP13569 1480 aa21.3■■□□□ 1
PRPF8-207ENST00000573681 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
PRPF8-207ENST00000573681 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
PRPF8-207ENST00000573681 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
PRPF8-207ENST00000573681 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
PRPF8-207ENST00000573681 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
PRPF8-207ENST00000573681 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
PRPF8-207ENST00000573681 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
PRPF8-207ENST00000573681 SYNJ1O43426 1573 aa20.98■□□□□ 0.95
PRPF8-207ENST00000573681 EEA1Q15075 1411 aa20.97■□□□□ 0.95
PRPF8-207ENST00000573681 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
PRPF8-207ENST00000573681 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
PRPF8-207ENST00000573681 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
PRPF8-207ENST00000573681 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.94
PRPF8-207ENST00000573681 NESP48681 1621 aa20.93■□□□□ 0.94
PRPF8-207ENST00000573681 CUX1P39880 1505 aa20.91■□□□□ 0.94
PRPF8-207ENST00000573681 BIVM-ERCC5R4GMW8 1640 aa20.9■□□□□ 0.94
PRPF8-207ENST00000573681 SOGA1O94964 1423 aa20.9■□□□□ 0.94
PRPF8-207ENST00000573681 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
PRPF8-207ENST00000573681 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
PRPF8-207ENST00000573681 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
PRPF8-207ENST00000573681 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
PRPF8-207ENST00000573681 TOPBP1Q92547 1522 aa20.72■□□□□ 0.91
PRPF8-207ENST00000573681 KIF27Q86VH2 1401 aa20.71■□□□□ 0.91
PRPF8-207ENST00000573681 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
PRPF8-207ENST00000573681 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
PRPF8-207ENST00000573681 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
PRPF8-207ENST00000573681 TNIKQ9UKE5 1360 aa20.61■□□□□ 0.89
PRPF8-207ENST00000573681 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
PRPF8-207ENST00000573681 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
PRPF8-207ENST00000573681 CUX2O14529 1486 aa20.6■□□□□ 0.89
PRPF8-207ENST00000573681 GOLGA3Q08378 1498 aa20.6■□□□□ 0.89
PRPF8-207ENST00000573681 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
PRPF8-207ENST00000573681 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
PRPF8-207ENST00000573681 ABCA10Q8WWZ4 1543 aa20.56■□□□□ 0.88
PRPF8-207ENST00000573681 IGF1RP08069 1367 aa20.56■□□□□ 0.88
PRPF8-207ENST00000573681 KIF21BO75037 1637 aa20.56■□□□□ 0.88
PRPF8-207ENST00000573681 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
PRPF8-207ENST00000573681 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
PRPF8-207ENST00000573681 PRXQ9BXM0 1461 aa20.53■□□□□ 0.88
PRPF8-207ENST00000573681 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
PRPF8-207ENST00000573681 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
PRPF8-207ENST00000573681 WDR62O43379 1518 aa20.44■□□□□ 0.86
PRPF8-207ENST00000573681 CARMIL1Q5VZK9 1371 aa20.44■□□□□ 0.86
PRPF8-207ENST00000573681 CEP162Q5TB80 1403 aa20.4■□□□□ 0.86
PRPF8-207ENST00000573681 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
PRPF8-207ENST00000573681 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
PRPF8-207ENST00000573681 GAPVD1Q14C86 1478 aa20.37■□□□□ 0.85
PRPF8-207ENST00000573681 TARBP1Q13395 1621 aaKnown RBP20.35■□□□□ 0.85
PRPF8-207ENST00000573681 WDR97A6NE52 1622 aa20.32■□□□□ 0.84
PRPF8-207ENST00000573681 THOC2Q8NI27 1593 aaKnown RBP20.29■□□□□ 0.84
PRPF8-207ENST00000573681 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
PRPF8-207ENST00000573681 CLIP1P30622 1438 aa20.28■□□□□ 0.84
PRPF8-207ENST00000573681 CUL7Q14999 1698 aa20.25■□□□□ 0.83
PRPF8-207ENST00000573681 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.831e-7■■■■□ 24.5
PRPF8-207ENST00000573681 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
PRPF8-207ENST00000573681 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
PRPF8-207ENST00000573681 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
PRPF8-207ENST00000573681 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
PRPF8-207ENST00000573681 TRIM26Q12899 539 aaPredicted RBP20.12■□□□□ 0.81
PRPF8-207ENST00000573681 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
PRPF8-207ENST00000573681 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
PRPF8-207ENST00000573681 APLP2Q06481 763 aa20.05■□□□□ 0.8
PRPF8-207ENST00000573681 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
PRPF8-207ENST00000573681 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
PRPF8-207ENST00000573681 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
PRPF8-207ENST00000573681 ADAMTS12P58397 1594 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 470 ms