RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-222ENST00000573667 NISCHQ9Y2I1 1504 aa29.32■■■□□ 2.28
ABR-222ENST00000573667 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
ABR-222ENST00000573667 ABCC9O60706 1549 aa25.82■■□□□ 1.72
ABR-222ENST00000573667 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
ABR-222ENST00000573667 NACADO15069 1562 aa24.69■■□□□ 1.54
ABR-222ENST00000573667 DCAF8L2P0C7V8 631 aa24.61■■□□□ 1.53
ABR-222ENST00000573667 MYO15BQ96JP2 1530 aa24.43■■□□□ 1.5
ABR-222ENST00000573667 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
ABR-222ENST00000573667 UNC13AQ9UPW8 1703 aa24.33■■□□□ 1.49
ABR-222ENST00000573667 DCAF1Q9Y4B6 1507 aa24.25■■□□□ 1.47
ABR-222ENST00000573667 PABPN1Q86U42 306 aaKnown RBP eCLIP24.03■■□□□ 1.44
ABR-222ENST00000573667 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
ABR-222ENST00000573667 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
ABR-222ENST00000573667 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
ABR-222ENST00000573667 SHROOM4Q9ULL8 1493 aa23.75■■□□□ 1.39
ABR-222ENST00000573667 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
ABR-222ENST00000573667 CC2D2AQ9P2K1 1620 aa23.39■■□□□ 1.33
ABR-222ENST00000573667 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
ABR-222ENST00000573667 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
ABR-222ENST00000573667 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
ABR-222ENST00000573667 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
ABR-222ENST00000573667 NCAPD3P42695 1498 aa22.72■■□□□ 1.23
ABR-222ENST00000573667 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
ABR-222ENST00000573667 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
ABR-222ENST00000573667 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
ABR-222ENST00000573667 MROH2BQ7Z745 1585 aa22.58■■□□□ 1.2
ABR-222ENST00000573667 BAZ1BQ9UIG0 1483 aaKnown RBP22.56■■□□□ 1.2
ABR-222ENST00000573667 WIZO95785 1651 aa22.4■■□□□ 1.18
ABR-222ENST00000573667 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
ABR-222ENST00000573667 NESP48681 1621 aa22.26■■□□□ 1.15
ABR-222ENST00000573667 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
ABR-222ENST00000573667 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
ABR-222ENST00000573667 CUX2O14529 1486 aa22.13■■□□□ 1.13
ABR-222ENST00000573667 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
ABR-222ENST00000573667 KIF21AQ7Z4S6 1674 aa22.11■■□□□ 1.13
ABR-222ENST00000573667 PDS5BQ9NTI5 1447 aa22.06■■□□□ 1.12
ABR-222ENST00000573667 CADPSQ9ULU8 1353 aa22.05■■□□□ 1.12
ABR-222ENST00000573667 THOC2Q8NI27 1593 aaKnown RBP22.03■■□□□ 1.12
ABR-222ENST00000573667 PRDM2Q13029 1718 aa21.92■■□□□ 1.1
ABR-222ENST00000573667 CFTRP13569 1480 aa21.88■■□□□ 1.09
ABR-222ENST00000573667 CEP164Q9UPV0 1460 aa21.85■■□□□ 1.09
ABR-222ENST00000573667 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
ABR-222ENST00000573667 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.08
ABR-222ENST00000573667 CCDC88BA6NC98 1476 aa21.82■■□□□ 1.08
ABR-222ENST00000573667 WDR62O43379 1518 aa21.79■■□□□ 1.08
ABR-222ENST00000573667 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
ABR-222ENST00000573667 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
ABR-222ENST00000573667 SUPT5HO00267 1087 aaKnown RBP21.52■■□□□ 1.04
ABR-222ENST00000573667 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
ABR-222ENST00000573667 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
ABR-222ENST00000573667 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
ABR-222ENST00000573667 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
ABR-222ENST00000573667 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
ABR-222ENST00000573667 EIF4G3O43432 1585 aaKnown RBP21.27■□□□□ 0.99
ABR-222ENST00000573667 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
ABR-222ENST00000573667 POLA1P09884 1462 aaPredicted RBP21.25■□□□□ 0.99
ABR-222ENST00000573667 CUX1P39880 1505 aa21.2■□□□□ 0.98
ABR-222ENST00000573667 FGD5Q6ZNL6 1462 aa21.19■□□□□ 0.98
ABR-222ENST00000573667 SOGA1O94964 1423 aa21.16■□□□□ 0.98
ABR-222ENST00000573667 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
ABR-222ENST00000573667 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
ABR-222ENST00000573667 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
ABR-222ENST00000573667 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.97
ABR-222ENST00000573667 CHD1O14646 1710 aa21.1■□□□□ 0.97
ABR-222ENST00000573667 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
ABR-222ENST00000573667 TDRD9Q8NDG6 1382 aaKnown RBP21.04■□□□□ 0.96
ABR-222ENST00000573667 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
ABR-222ENST00000573667 TOP2BQ02880 1626 aa21.01■□□□□ 0.95
ABR-222ENST00000573667 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
ABR-222ENST00000573667 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
ABR-222ENST00000573667 GRIN2BQ13224 1484 aa20.95■□□□□ 0.94
ABR-222ENST00000573667 SNAPC4Q5SXM2 1469 aa20.95■□□□□ 0.94
ABR-222ENST00000573667 ABCA10Q8WWZ4 1543 aa20.95■□□□□ 0.94
ABR-222ENST00000573667 FBLN2P98095 1184 aa20.95■□□□□ 0.94
ABR-222ENST00000573667 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
ABR-222ENST00000573667 GAPVD1Q14C86 1478 aa20.93■□□□□ 0.94
ABR-222ENST00000573667 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
ABR-222ENST00000573667 RIMBP3CA6NJZ7 1639 aa20.9■□□□□ 0.94
ABR-222ENST00000573667 RIMBP3BA6NNM3 1639 aa20.9■□□□□ 0.94
ABR-222ENST00000573667 RIMBP3Q9UFD9 1639 aa20.9■□□□□ 0.94
ABR-222ENST00000573667 TRIM41Q8WV44 630 aa20.89■□□□□ 0.93
ABR-222ENST00000573667 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
ABR-222ENST00000573667 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
ABR-222ENST00000573667 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
ABR-222ENST00000573667 CLASP1Q7Z460 1538 aa20.75■□□□□ 0.91
ABR-222ENST00000573667 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
ABR-222ENST00000573667 ERICH3Q5RHP9 1530 aa20.73■□□□□ 0.91
ABR-222ENST00000573667 GRIN2AQ12879 1464 aa20.69■□□□□ 0.9
ABR-222ENST00000573667 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
ABR-222ENST00000573667 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
ABR-222ENST00000573667 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
ABR-222ENST00000573667 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
ABR-222ENST00000573667 KIF27Q86VH2 1401 aa20.58■□□□□ 0.88
ABR-222ENST00000573667 CUL7Q14999 1698 aa20.57■□□□□ 0.88
ABR-222ENST00000573667 NUP160Q12769 1436 aa20.56■□□□□ 0.88
ABR-222ENST00000573667 SHROOM2Q13796 1616 aa20.5■□□□□ 0.87
ABR-222ENST00000573667 RUSC2Q8N2Y8 1516 aa20.46■□□□□ 0.87
ABR-222ENST00000573667 IGF1RP08069 1367 aa20.46■□□□□ 0.87
ABR-222ENST00000573667 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
ABR-222ENST00000573667 CARMIL1Q5VZK9 1371 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms