RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 NISCHQ9Y2I1 1504 aa31.08■■■□□ 2.57
POLR2A-202ENST00000573603 ABCC9O60706 1549 aa27.95■■■□□ 2.06
POLR2A-202ENST00000573603 CCDC180Q9P1Z9 1646 aa27.95■■■□□ 2.06
POLR2A-202ENST00000573603 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
POLR2A-202ENST00000573603 NACADO15069 1562 aa26.37■■□□□ 1.81
POLR2A-202ENST00000573603 DCAF8L2P0C7V8 631 aa26.24■■□□□ 1.79
POLR2A-202ENST00000573603 DNAJC5BQ9UF47 199 aa26.13■■□□□ 1.77
POLR2A-202ENST00000573603 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
POLR2A-202ENST00000573603 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
POLR2A-202ENST00000573603 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
POLR2A-202ENST00000573603 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
POLR2A-202ENST00000573603 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
POLR2A-202ENST00000573603 DCAF1Q9Y4B6 1507 aa25.64■■□□□ 1.7
POLR2A-202ENST00000573603 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
POLR2A-202ENST00000573603 SHROOM4Q9ULL8 1493 aa25.42■■□□□ 1.66
POLR2A-202ENST00000573603 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
POLR2A-202ENST00000573603 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
POLR2A-202ENST00000573603 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
POLR2A-202ENST00000573603 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
POLR2A-202ENST00000573603 SMARCA4P51532 1647 aa24.3■■□□□ 1.48
POLR2A-202ENST00000573603 ATAD2BQ9ULI0 1458 aa24.27■■□□□ 1.48
POLR2A-202ENST00000573603 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
POLR2A-202ENST00000573603 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
POLR2A-202ENST00000573603 BAZ1AQ9NRL2 1556 aaPredicted RBP24.16■■□□□ 1.46
POLR2A-202ENST00000573603 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
POLR2A-202ENST00000573603 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
POLR2A-202ENST00000573603 CUX2O14529 1486 aa24.05■■□□□ 1.44
POLR2A-202ENST00000573603 PEG3Q9GZU2 1588 aa24.01■■□□□ 1.43
POLR2A-202ENST00000573603 NESP48681 1621 aa24.01■■□□□ 1.43
POLR2A-202ENST00000573603 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
POLR2A-202ENST00000573603 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
POLR2A-202ENST00000573603 LAMC3Q9Y6N6 1575 aa23.82■■□□□ 1.4
POLR2A-202ENST00000573603 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
POLR2A-202ENST00000573603 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
POLR2A-202ENST00000573603 WIZO95785 1651 aa23.73■■□□□ 1.39
POLR2A-202ENST00000573603 PDS5BQ9NTI5 1447 aa23.65■■□□□ 1.38
POLR2A-202ENST00000573603 CADPSQ9ULU8 1353 aa23.58■■□□□ 1.37
POLR2A-202ENST00000573603 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
POLR2A-202ENST00000573603 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
POLR2A-202ENST00000573603 WDR62O43379 1518 aa23.43■■□□□ 1.34
POLR2A-202ENST00000573603 TOP2AP11388 1531 aaKnown RBP23.41■■□□□ 1.34
POLR2A-202ENST00000573603 CEP164Q9UPV0 1460 aa23.4■■□□□ 1.34
POLR2A-202ENST00000573603 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
POLR2A-202ENST00000573603 CFTRP13569 1480 aa23.32■■□□□ 1.32
POLR2A-202ENST00000573603 PRDM2Q13029 1718 aa23.2■■□□□ 1.3
POLR2A-202ENST00000573603 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
POLR2A-202ENST00000573603 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
POLR2A-202ENST00000573603 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
POLR2A-202ENST00000573603 TOPBP1Q92547 1522 aa22.92■■□□□ 1.26
POLR2A-202ENST00000573603 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
POLR2A-202ENST00000573603 ZNF608Q9ULD9 1512 aaPredicted RBP22.9■■□□□ 1.26
POLR2A-202ENST00000573603 OSCARQ8IYS5 282 aa22.89■■□□□ 1.25
POLR2A-202ENST00000573603 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
POLR2A-202ENST00000573603 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
POLR2A-202ENST00000573603 ABCC8Q09428 1581 aa22.82■■□□□ 1.24
POLR2A-202ENST00000573603 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
POLR2A-202ENST00000573603 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
POLR2A-202ENST00000573603 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
POLR2A-202ENST00000573603 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
POLR2A-202ENST00000573603 POLA1P09884 1462 aaPredicted RBP22.68■■□□□ 1.22
POLR2A-202ENST00000573603 CHD1O14646 1710 aa22.67■■□□□ 1.22
POLR2A-202ENST00000573603 AQRO60306 1485 aaKnown RBP eCLIP22.66■■□□□ 1.228e-7■■■■■ 28.7
POLR2A-202ENST00000573603 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
POLR2A-202ENST00000573603 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
POLR2A-202ENST00000573603 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
POLR2A-202ENST00000573603 SOGA1O94964 1423 aa22.55■■□□□ 1.2
POLR2A-202ENST00000573603 CUX1P39880 1505 aa22.54■■□□□ 1.2
POLR2A-202ENST00000573603 TDRD9Q8NDG6 1382 aaKnown RBP22.52■■□□□ 1.2
POLR2A-202ENST00000573603 FBLN2P98095 1184 aa22.52■■□□□ 1.2
POLR2A-202ENST00000573603 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
POLR2A-202ENST00000573603 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
POLR2A-202ENST00000573603 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
POLR2A-202ENST00000573603 ARAP1Q96P48 1450 aa22.4■■□□□ 1.18
POLR2A-202ENST00000573603 CYB5RLQ6IPT4 315 aa22.39■■□□□ 1.17
POLR2A-202ENST00000573603 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
POLR2A-202ENST00000573603 PBRM1Q86U86 1689 aa22.38■■□□□ 1.17
POLR2A-202ENST00000573603 GRIN2BQ13224 1484 aa22.37■■□□□ 1.17
POLR2A-202ENST00000573603 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
POLR2A-202ENST00000573603 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
POLR2A-202ENST00000573603 CHMP7Q8WUX9 453 aaPredicted RBP22.32■■□□□ 1.16
POLR2A-202ENST00000573603 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
POLR2A-202ENST00000573603 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
POLR2A-202ENST00000573603 ABCA5Q8WWZ7 1642 aa22.29■■□□□ 1.16
POLR2A-202ENST00000573603 ABCA10Q8WWZ4 1543 aa22.27■■□□□ 1.16
POLR2A-202ENST00000573603 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.14
POLR2A-202ENST00000573603 TRHP20396 242 aaPredicted RBP22.18■■□□□ 1.14
POLR2A-202ENST00000573603 TOP2BQ02880 1626 aa22.17■■□□□ 1.14
POLR2A-202ENST00000573603 WRNQ14191 1432 aaPredicted RBP eCLIP22.16■■□□□ 1.14
POLR2A-202ENST00000573603 ADAMTS12P58397 1594 aa22.14■■□□□ 1.13
POLR2A-202ENST00000573603 GRIN2AQ12879 1464 aa22.1■■□□□ 1.13
POLR2A-202ENST00000573603 CEP170Q5SW79 1584 aa22.05■■□□□ 1.12
POLR2A-202ENST00000573603 ERCC6L2Q5T890 1561 aa22.03■■□□□ 1.12
POLR2A-202ENST00000573603 FHAD1B1AJZ9 1412 aa22■■□□□ 1.11
POLR2A-202ENST00000573603 NUP160Q12769 1436 aa22■■□□□ 1.11
POLR2A-202ENST00000573603 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
POLR2A-202ENST00000573603 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
POLR2A-202ENST00000573603 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
POLR2A-202ENST00000573603 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
POLR2A-202ENST00000573603 JPH4Q96JJ6 628 aa21.73■■□□□ 1.07
POLR2A-202ENST00000573603 CUL7Q14999 1698 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms