RNA–Protein interactions for RNA: ENST00000573398.1

RILP-203, Transcript of Rab interacting lysosomal protein, humanhuman

TSL 3

Gene RILP, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RILP-203ENST00000573398 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.55
RILP-203ENST00000573398 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
RILP-203ENST00000573398 ABCC9O60706 1549 aa43.12■■■■■ 4.49
RILP-203ENST00000573398 ZCCHC6Q5VYS8 1495 aaKnown RBP41.62■■■■■ 4.25
RILP-203ENST00000573398 RB1CC1Q8TDY2 1594 aa41.4■■■■■ 4.22
RILP-203ENST00000573398 NACADO15069 1562 aa41.27■■■■■ 4.2
RILP-203ENST00000573398 DCAF8L2P0C7V8 631 aa41.22■■■■■ 4.19
RILP-203ENST00000573398 DCAF1Q9Y4B6 1507 aa41.2■■■■■ 4.19
RILP-203ENST00000573398 MYO15BQ96JP2 1530 aa41.06■■■■■ 4.16
RILP-203ENST00000573398 UNC13AQ9UPW8 1703 aa40.5■■■■■ 4.07
RILP-203ENST00000573398 PABPN1Q86U42 306 aaKnown RBP eCLIP40.24■■■■■ 4.03
RILP-203ENST00000573398 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
RILP-203ENST00000573398 SCRIBQ14160 1630 aa40.08■■■■■ 4.01
RILP-203ENST00000573398 SHROOM4Q9ULL8 1493 aa39.81■■■■□ 3.96
RILP-203ENST00000573398 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
RILP-203ENST00000573398 EIF4G1Q04637 1599 aaKnown RBP39.08■■■■□ 3.85
RILP-203ENST00000573398 CC2D2AQ9P2K1 1620 aa39.01■■■■□ 3.84
RILP-203ENST00000573398 CECR2Q9BXF3 1484 aa38.77■■■■□ 3.8
RILP-203ENST00000573398 BAZ1AQ9NRL2 1556 aaPredicted RBP38.49■■■■□ 3.75
RILP-203ENST00000573398 SMARCA4P51532 1647 aa38.42■■■■□ 3.74
RILP-203ENST00000573398 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
RILP-203ENST00000573398 RSF1Q96T23 1441 aaPredicted RBP38.23■■■■□ 3.71
RILP-203ENST00000573398 NCAPD3P42695 1498 aa38.04■■■■□ 3.68
RILP-203ENST00000573398 PEG3Q9GZU2 1588 aa38.03■■■■□ 3.68
RILP-203ENST00000573398 ATAD2BQ9ULI0 1458 aa38.03■■■■□ 3.68
RILP-203ENST00000573398 SMARCA2P51531 1590 aa38.01■■■■□ 3.67
RILP-203ENST00000573398 WIZO95785 1651 aa37.98■■■■□ 3.67
RILP-203ENST00000573398 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
RILP-203ENST00000573398 HMGXB3Q12766 1538 aa37.86■■■■□ 3.65
RILP-203ENST00000573398 BAZ1BQ9UIG0 1483 aaKnown RBP37.74■■■■□ 3.63
RILP-203ENST00000573398 TOP2AP11388 1531 aaKnown RBP37.63■■■■□ 3.61
RILP-203ENST00000573398 NESP48681 1621 aa37.22■■■■□ 3.55
RILP-203ENST00000573398 ERCC6Q03468 1493 aa37.21■■■■□ 3.55
RILP-203ENST00000573398 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.54
RILP-203ENST00000573398 LAMC3Q9Y6N6 1575 aa37.13■■■■□ 3.53
RILP-203ENST00000573398 CADPSQ9ULU8 1353 aa36.93■■■■□ 3.5
RILP-203ENST00000573398 CUX2O14529 1486 aa36.89■■■■□ 3.5
RILP-203ENST00000573398 PDS5BQ9NTI5 1447 aa36.88■■■■□ 3.49
RILP-203ENST00000573398 KIF21AQ7Z4S6 1674 aa36.84■■■■□ 3.49
RILP-203ENST00000573398 CFTRP13569 1480 aa36.76■■■■□ 3.48
RILP-203ENST00000573398 THOC2Q8NI27 1593 aaKnown RBP36.73■■■■□ 3.47
RILP-203ENST00000573398 FANCD2Q9BXW9 1451 aa36.52■■■■□ 3.44
RILP-203ENST00000573398 CEP164Q9UPV0 1460 aa36.52■■■■□ 3.44
RILP-203ENST00000573398 MRC2Q9UBG0 1479 aa36.51■■■■□ 3.44
RILP-203ENST00000573398 PRDM2Q13029 1718 aa36.51■■■■□ 3.43
RILP-203ENST00000573398 WDR62O43379 1518 aa36.39■■■■□ 3.42
RILP-203ENST00000573398 URB2Q14146 1524 aaKnown RBP36.15■■■■□ 3.38
RILP-203ENST00000573398 ABCC8Q09428 1581 aa36.08■■■■□ 3.37
RILP-203ENST00000573398 DNAJC5Q9H3Z4 198 aa36.04■■■■□ 3.36
RILP-203ENST00000573398 WRNQ14191 1432 aaPredicted RBP eCLIP36.01■■■■□ 3.36
RILP-203ENST00000573398 CUX1P39880 1505 aa35.93■■■■□ 3.34
RILP-203ENST00000573398 DNMBPQ6XZF7 1577 aa35.92■■■■□ 3.34
RILP-203ENST00000573398 TOPBP1Q92547 1522 aa35.91■■■■□ 3.34
RILP-203ENST00000573398 SYNJ1O43426 1573 aa35.89■■■■□ 3.34
RILP-203ENST00000573398 CHIC1Q5VXU3 224 aa35.87■■■■□ 3.33
RILP-203ENST00000573398 TOP2BQ02880 1626 aa35.84■■■■□ 3.33
RILP-203ENST00000573398 BIVM-ERCC5R4GMW8 1640 aa35.83■■■■□ 3.33
RILP-203ENST00000573398 IFT140Q96RY7 1462 aa35.75■■■■□ 3.31
RILP-203ENST00000573398 TRIM41Q8WV44 630 aa35.75■■■■□ 3.31
RILP-203ENST00000573398 FGD5Q6ZNL6 1462 aa35.68■■■■□ 3.3
RILP-203ENST00000573398 POLA1P09884 1462 aaPredicted RBP35.64■■■■□ 3.3
RILP-203ENST00000573398 ZNF608Q9ULD9 1512 aaPredicted RBP35.58■■■■□ 3.29
RILP-203ENST00000573398 TARBP1Q13395 1621 aaKnown RBP35.54■■■■□ 3.28
RILP-203ENST00000573398 SOGA1O94964 1423 aa35.51■■■■□ 3.28
RILP-203ENST00000573398 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
RILP-203ENST00000573398 EIF4G3O43432 1585 aaKnown RBP35.47■■■■□ 3.27
RILP-203ENST00000573398 ABCA10Q8WWZ4 1543 aa35.37■■■■□ 3.25
RILP-203ENST00000573398 AQRO60306 1485 aaKnown RBP eCLIP35.37■■■■□ 3.255e-8■■■■■ 34.2
RILP-203ENST00000573398 OSCARQ8IYS5 282 aa35.34■■■■□ 3.25
RILP-203ENST00000573398 WDR97A6NE52 1622 aa35.33■■■■□ 3.25
RILP-203ENST00000573398 TDRD9Q8NDG6 1382 aaKnown RBP35.26■■■■□ 3.24
RILP-203ENST00000573398 KIF27Q86VH2 1401 aa35.19■■■■□ 3.22
RILP-203ENST00000573398 ABCA5Q8WWZ7 1642 aa35.15■■■■□ 3.22
RILP-203ENST00000573398 RUSC2Q8N2Y8 1516 aa35.15■■■■□ 3.22
RILP-203ENST00000573398 CHD1O14646 1710 aa35.13■■■■□ 3.21
RILP-203ENST00000573398 GAPVD1Q14C86 1478 aa35.12■■■■□ 3.21
RILP-203ENST00000573398 EEA1Q15075 1411 aa35.08■■■■□ 3.21
RILP-203ENST00000573398 GRIN2BQ13224 1484 aa35.07■■■■□ 3.2
RILP-203ENST00000573398 FBLN2P98095 1184 aa35.05■■■■□ 3.2
RILP-203ENST00000573398 SNAPC4Q5SXM2 1469 aa35.04■■■■□ 3.2
RILP-203ENST00000573398 PBRM1Q86U86 1689 aa35.04■■■■□ 3.2
RILP-203ENST00000573398 FAM9AQ8IZU1 332 aaPredicted RBP35■■■■□ 3.19
RILP-203ENST00000573398 MAGI1Q96QZ7 1491 aaPredicted RBP34.99■■■■□ 3.19
RILP-203ENST00000573398 ERICH3Q5RHP9 1530 aa34.96■■■■□ 3.19
RILP-203ENST00000573398 IGF1RP08069 1367 aa34.96■■■■□ 3.19
RILP-203ENST00000573398 CSRNP3Q8WYN3 585 aa34.92■■■■□ 3.18
RILP-203ENST00000573398 CHMP7Q8WUX9 453 aaPredicted RBP34.9■■■■□ 3.18
RILP-203ENST00000573398 SYNJ2O15056 1496 aa34.86■■■■□ 3.17
RILP-203ENST00000573398 RIMBP3CA6NJZ7 1639 aa34.81■■■■□ 3.16
RILP-203ENST00000573398 RIMBP3BA6NNM3 1639 aa34.81■■■■□ 3.16
RILP-203ENST00000573398 RIMBP3Q9UFD9 1639 aa34.81■■■■□ 3.16
RILP-203ENST00000573398 CUL7Q14999 1698 aa34.8■■■■□ 3.16
RILP-203ENST00000573398 CARMIL1Q5VZK9 1371 aa34.76■■■■□ 3.16
RILP-203ENST00000573398 ADAMTS12P58397 1594 aa34.76■■■■□ 3.16
RILP-203ENST00000573398 FHAD1B1AJZ9 1412 aa34.74■■■■□ 3.15
RILP-203ENST00000573398 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
RILP-203ENST00000573398 ARHGEF11O15085 1522 aa34.74■■■■□ 3.15
RILP-203ENST00000573398 CLASP1Q7Z460 1538 aa34.67■■■■□ 3.14
RILP-203ENST00000573398 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
RILP-203ENST00000573398 KIF21BO75037 1637 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms