RNA–Protein interactions for RNA: ENST00000573220.1

AC009171.2-201, humanhuman

TSL 3 BASIC

Gene AC009171.2, Length 318 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009171.2-201ENST00000573220 NISCHQ9Y2I1 1504 aa28.74■■■□□ 2.19
AC009171.2-201ENST00000573220 CCDC180Q9P1Z9 1646 aa25.55■■□□□ 1.68
AC009171.2-201ENST00000573220 ABCC9O60706 1549 aa25.3■■□□□ 1.64
AC009171.2-201ENST00000573220 RB1CC1Q8TDY2 1594 aa24.25■■□□□ 1.47
AC009171.2-201ENST00000573220 NACADO15069 1562 aa24.21■■□□□ 1.47
AC009171.2-201ENST00000573220 DCAF8L2P0C7V8 631 aa24.13■■□□□ 1.45
AC009171.2-201ENST00000573220 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
AC009171.2-201ENST00000573220 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
AC009171.2-201ENST00000573220 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
AC009171.2-201ENST00000573220 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
AC009171.2-201ENST00000573220 DNAJC5BQ9UF47 199 aa23.55■■□□□ 1.36
AC009171.2-201ENST00000573220 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
AC009171.2-201ENST00000573220 UNC13AQ9UPW8 1703 aa23.44■■□□□ 1.34
AC009171.2-201ENST00000573220 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
AC009171.2-201ENST00000573220 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
AC009171.2-201ENST00000573220 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
AC009171.2-201ENST00000573220 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
AC009171.2-201ENST00000573220 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
AC009171.2-201ENST00000573220 NCAPD3P42695 1498 aa22.41■■□□□ 1.18
AC009171.2-201ENST00000573220 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
AC009171.2-201ENST00000573220 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
AC009171.2-201ENST00000573220 SMARCA4P51532 1647 aa22.27■■□□□ 1.16
AC009171.2-201ENST00000573220 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
AC009171.2-201ENST00000573220 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
AC009171.2-201ENST00000573220 PEG3Q9GZU2 1588 aa22.14■■□□□ 1.13
AC009171.2-201ENST00000573220 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
AC009171.2-201ENST00000573220 BAZ1BQ9UIG0 1483 aaKnown RBP22.09■■□□□ 1.13
AC009171.2-201ENST00000573220 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
AC009171.2-201ENST00000573220 RSF1Q96T23 1441 aaPredicted RBP21.83■■□□□ 1.09
AC009171.2-201ENST00000573220 CUX2O14529 1486 aa21.79■■□□□ 1.08
AC009171.2-201ENST00000573220 NESP48681 1621 aa21.79■■□□□ 1.08
AC009171.2-201ENST00000573220 CADPSQ9ULU8 1353 aa21.75■■□□□ 1.07
AC009171.2-201ENST00000573220 LAMC3Q9Y6N6 1575 aa21.75■■□□□ 1.07
AC009171.2-201ENST00000573220 WIZO95785 1651 aa21.74■■□□□ 1.07
AC009171.2-201ENST00000573220 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
AC009171.2-201ENST00000573220 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
AC009171.2-201ENST00000573220 CFTRP13569 1480 aa21.53■■□□□ 1.04
AC009171.2-201ENST00000573220 DNAJC5Q9H3Z4 198 aa21.5■■□□□ 1.03
AC009171.2-201ENST00000573220 THOC2Q8NI27 1593 aaKnown RBP21.48■■□□□ 1.03
AC009171.2-201ENST00000573220 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
AC009171.2-201ENST00000573220 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
AC009171.2-201ENST00000573220 CCDC88BA6NC98 1476 aa21.39■■□□□ 1.02
AC009171.2-201ENST00000573220 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.02
AC009171.2-201ENST00000573220 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
AC009171.2-201ENST00000573220 WDR62O43379 1518 aa21.35■■□□□ 1.01
AC009171.2-201ENST00000573220 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
AC009171.2-201ENST00000573220 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
AC009171.2-201ENST00000573220 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
AC009171.2-201ENST00000573220 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
AC009171.2-201ENST00000573220 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
AC009171.2-201ENST00000573220 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
AC009171.2-201ENST00000573220 DNMBPQ6XZF7 1577 aa20.95■□□□□ 0.94
AC009171.2-201ENST00000573220 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
AC009171.2-201ENST00000573220 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
AC009171.2-201ENST00000573220 POLA1P09884 1462 aaPredicted RBP20.83■□□□□ 0.93
AC009171.2-201ENST00000573220 SOGA1O94964 1423 aa20.8■□□□□ 0.92
AC009171.2-201ENST00000573220 AQRO60306 1485 aaKnown RBP eCLIP20.75■□□□□ 0.91
AC009171.2-201ENST00000573220 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
AC009171.2-201ENST00000573220 CUX1P39880 1505 aa20.73■□□□□ 0.91
AC009171.2-201ENST00000573220 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
AC009171.2-201ENST00000573220 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
AC009171.2-201ENST00000573220 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
AC009171.2-201ENST00000573220 EIF4G3O43432 1585 aaKnown RBP20.68■□□□□ 0.9
AC009171.2-201ENST00000573220 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
AC009171.2-201ENST00000573220 WRNQ14191 1432 aaPredicted RBP eCLIP20.58■□□□□ 0.88
AC009171.2-201ENST00000573220 ABCA10Q8WWZ4 1543 aa20.58■□□□□ 0.88
AC009171.2-201ENST00000573220 GRIN2BQ13224 1484 aa20.57■□□□□ 0.88
AC009171.2-201ENST00000573220 FBLN2P98095 1184 aa20.57■□□□□ 0.88
AC009171.2-201ENST00000573220 TRIM41Q8WV44 630 aa20.55■□□□□ 0.88
AC009171.2-201ENST00000573220 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
AC009171.2-201ENST00000573220 CHMP7Q8WUX9 453 aaPredicted RBP20.53■□□□□ 0.88
AC009171.2-201ENST00000573220 GAPVD1Q14C86 1478 aa20.53■□□□□ 0.88
AC009171.2-201ENST00000573220 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
AC009171.2-201ENST00000573220 TOP2BQ02880 1626 aa20.48■□□□□ 0.87
AC009171.2-201ENST00000573220 SYNJ2O15056 1496 aa20.46■□□□□ 0.87
AC009171.2-201ENST00000573220 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
AC009171.2-201ENST00000573220 BIVM-ERCC5R4GMW8 1640 aa20.42■□□□□ 0.86
AC009171.2-201ENST00000573220 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
AC009171.2-201ENST00000573220 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
AC009171.2-201ENST00000573220 CHD1O14646 1710 aa20.38■□□□□ 0.85
AC009171.2-201ENST00000573220 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
AC009171.2-201ENST00000573220 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
AC009171.2-201ENST00000573220 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
AC009171.2-201ENST00000573220 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
AC009171.2-201ENST00000573220 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
AC009171.2-201ENST00000573220 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
AC009171.2-201ENST00000573220 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
AC009171.2-201ENST00000573220 PBRM1Q86U86 1689 aa20.28■□□□□ 0.84
AC009171.2-201ENST00000573220 GRIN2AQ12879 1464 aa20.27■□□□□ 0.84
AC009171.2-201ENST00000573220 NUP160Q12769 1436 aa20.25■□□□□ 0.83
AC009171.2-201ENST00000573220 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
AC009171.2-201ENST00000573220 ADAMTS12P58397 1594 aa20.22■□□□□ 0.83
AC009171.2-201ENST00000573220 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
AC009171.2-201ENST00000573220 IGF1RP08069 1367 aa20.2■□□□□ 0.82
AC009171.2-201ENST00000573220 CEP170Q5SW79 1584 aa20.11■□□□□ 0.81
AC009171.2-201ENST00000573220 JPH4Q96JJ6 628 aa20.1■□□□□ 0.81
AC009171.2-201ENST00000573220 CARMIL1Q5VZK9 1371 aa20.04■□□□□ 0.8
AC009171.2-201ENST00000573220 SHROOM2Q13796 1616 aa20.01■□□□□ 0.79
AC009171.2-201ENST00000573220 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
AC009171.2-201ENST00000573220 PRG4Q92954 1404 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms