RNA–Protein interactions for RNA: ENST00000572733.1

RPTOR-204, Transcript of regulatory associated protein of MTOR complex 1, humanhuman

TSL 3

Gene RPTOR, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPTOR-204ENST00000572733 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
RPTOR-204ENST00000572733 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
RPTOR-204ENST00000572733 ABCC9O60706 1549 aa20.35■□□□□ 0.85
RPTOR-204ENST00000572733 RB1CC1Q8TDY2 1594 aa19.54■□□□□ 0.72
RPTOR-204ENST00000572733 NACADO15069 1562 aa19.47■□□□□ 0.71
RPTOR-204ENST00000572733 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
RPTOR-204ENST00000572733 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
RPTOR-204ENST00000572733 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
RPTOR-204ENST00000572733 DCAF1Q9Y4B6 1507 aa19.13■□□□□ 0.65
RPTOR-204ENST00000572733 UNC13AQ9UPW8 1703 aa19.13■□□□□ 0.65
RPTOR-204ENST00000572733 PABPN1Q86U42 306 aaKnown RBP eCLIP18.95■□□□□ 0.62
RPTOR-204ENST00000572733 BICRAQ9NZM4 1560 aa18.91■□□□□ 0.62
RPTOR-204ENST00000572733 SCRIBQ14160 1630 aa18.85■□□□□ 0.61
RPTOR-204ENST00000572733 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
RPTOR-204ENST00000572733 SHROOM4Q9ULL8 1493 aa18.72■□□□□ 0.59
RPTOR-204ENST00000572733 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
RPTOR-204ENST00000572733 CC2D2AQ9P2K1 1620 aa18.42■□□□□ 0.54
RPTOR-204ENST00000572733 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
RPTOR-204ENST00000572733 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
RPTOR-204ENST00000572733 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
RPTOR-204ENST00000572733 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
RPTOR-204ENST00000572733 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
RPTOR-204ENST00000572733 ATAD2BQ9ULI0 1458 aa17.91■□□□□ 0.46
RPTOR-204ENST00000572733 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
RPTOR-204ENST00000572733 MROH2BQ7Z745 1585 aa17.81■□□□□ 0.44
RPTOR-204ENST00000572733 PEG3Q9GZU2 1588 aa17.81■□□□□ 0.44
RPTOR-204ENST00000572733 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
RPTOR-204ENST00000572733 WIZO95785 1651 aa17.65■□□□□ 0.42
RPTOR-204ENST00000572733 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
RPTOR-204ENST00000572733 NESP48681 1621 aa17.54■□□□□ 0.4
RPTOR-204ENST00000572733 RSF1Q96T23 1441 aaPredicted RBP17.54■□□□□ 0.4
RPTOR-204ENST00000572733 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
RPTOR-204ENST00000572733 TOP2AP11388 1531 aaKnown RBP17.45■□□□□ 0.38
RPTOR-204ENST00000572733 CUX2O14529 1486 aa17.44■□□□□ 0.38
RPTOR-204ENST00000572733 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
RPTOR-204ENST00000572733 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.38
RPTOR-204ENST00000572733 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
RPTOR-204ENST00000572733 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
RPTOR-204ENST00000572733 CFTRP13569 1480 aa17.26■□□□□ 0.35
RPTOR-204ENST00000572733 PRDM2Q13029 1718 aa17.24■□□□□ 0.35
RPTOR-204ENST00000572733 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
RPTOR-204ENST00000572733 MRC2Q9UBG0 1479 aa17.23■□□□□ 0.35
RPTOR-204ENST00000572733 FANCD2Q9BXW9 1451 aa17.22■□□□□ 0.35
RPTOR-204ENST00000572733 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
RPTOR-204ENST00000572733 WDR62O43379 1518 aa17.17■□□□□ 0.34
RPTOR-204ENST00000572733 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
RPTOR-204ENST00000572733 DNAJC5Q9H3Z4 198 aa17.03■□□□□ 0.32
RPTOR-204ENST00000572733 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
RPTOR-204ENST00000572733 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
RPTOR-204ENST00000572733 TOPBP1Q92547 1522 aa16.92■□□□□ 0.3
RPTOR-204ENST00000572733 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
RPTOR-204ENST00000572733 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
RPTOR-204ENST00000572733 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.28
RPTOR-204ENST00000572733 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
RPTOR-204ENST00000572733 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
RPTOR-204ENST00000572733 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
RPTOR-204ENST00000572733 CUX1P39880 1505 aa16.73■□□□□ 0.27
RPTOR-204ENST00000572733 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
RPTOR-204ENST00000572733 SOGA1O94964 1423 aa16.69■□□□□ 0.26
RPTOR-204ENST00000572733 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
RPTOR-204ENST00000572733 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
RPTOR-204ENST00000572733 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
RPTOR-204ENST00000572733 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
RPTOR-204ENST00000572733 CHD1O14646 1710 aa16.61■□□□□ 0.25
RPTOR-204ENST00000572733 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
RPTOR-204ENST00000572733 BIVM-ERCC5R4GMW8 1640 aa16.59■□□□□ 0.25
RPTOR-204ENST00000572733 TOP2BQ02880 1626 aa16.57■□□□□ 0.24
RPTOR-204ENST00000572733 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.249e-6■■■■■ 50.1
RPTOR-204ENST00000572733 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
RPTOR-204ENST00000572733 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
RPTOR-204ENST00000572733 FBLN2P98095 1184 aa16.53■□□□□ 0.24
RPTOR-204ENST00000572733 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
RPTOR-204ENST00000572733 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
RPTOR-204ENST00000572733 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
RPTOR-204ENST00000572733 GAPVD1Q14C86 1478 aa16.51■□□□□ 0.23
RPTOR-204ENST00000572733 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
RPTOR-204ENST00000572733 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
RPTOR-204ENST00000572733 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
RPTOR-204ENST00000572733 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
RPTOR-204ENST00000572733 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
RPTOR-204ENST00000572733 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
RPTOR-204ENST00000572733 SYNJ2O15056 1496 aa16.44■□□□□ 0.22
RPTOR-204ENST00000572733 CHMP7Q8WUX9 453 aaPredicted RBP16.44■□□□□ 0.22
RPTOR-204ENST00000572733 ARHGEF11O15085 1522 aa16.41■□□□□ 0.22
RPTOR-204ENST00000572733 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
RPTOR-204ENST00000572733 CLASP1Q7Z460 1538 aa16.35■□□□□ 0.21
RPTOR-204ENST00000572733 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
RPTOR-204ENST00000572733 GRIN2AQ12879 1464 aa16.32■□□□□ 0.2
RPTOR-204ENST00000572733 FHAD1B1AJZ9 1412 aa16.3■□□□□ 0.2
RPTOR-204ENST00000572733 ARAP1Q96P48 1450 aa16.25■□□□□ 0.19
RPTOR-204ENST00000572733 CYB5RLQ6IPT4 315 aa16.25■□□□□ 0.19
RPTOR-204ENST00000572733 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
RPTOR-204ENST00000572733 CEP170Q5SW79 1584 aa16.25■□□□□ 0.19
RPTOR-204ENST00000572733 NUP160Q12769 1436 aa16.22■□□□□ 0.19
RPTOR-204ENST00000572733 CUL7Q14999 1698 aa16.21■□□□□ 0.19
RPTOR-204ENST00000572733 SHROOM2Q13796 1616 aa16.16■□□□□ 0.18
RPTOR-204ENST00000572733 IGF1RP08069 1367 aa16.14■□□□□ 0.17
RPTOR-204ENST00000572733 RUSC2Q8N2Y8 1516 aa16.14■□□□□ 0.17
RPTOR-204ENST00000572733 ERCC6L2Q5T890 1561 aa16.11■□□□□ 0.17
RPTOR-204ENST00000572733 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms