RNA–Protein interactions for RNA: ENST00000572658.1

PKMYT1-209, Transcript of protein kinase, membrane associated tyrosine/threonine 1, humanhuman

TSL 2

Gene PKMYT1, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKMYT1-209ENST00000572658 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
PKMYT1-209ENST00000572658 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
PKMYT1-209ENST00000572658 ABCC9O60706 1549 aa28.05■■■□□ 2.08
PKMYT1-209ENST00000572658 RB1CC1Q8TDY2 1594 aa26.83■■□□□ 1.89
PKMYT1-209ENST00000572658 NACADO15069 1562 aa26.69■■□□□ 1.86
PKMYT1-209ENST00000572658 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
PKMYT1-209ENST00000572658 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
PKMYT1-209ENST00000572658 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
PKMYT1-209ENST00000572658 PABPN1Q86U42 306 aaKnown RBP eCLIP26.17■■□□□ 1.78
PKMYT1-209ENST00000572658 UNC13AQ9UPW8 1703 aa26.15■■□□□ 1.78
PKMYT1-209ENST00000572658 DCAF1Q9Y4B6 1507 aa26.11■■□□□ 1.77
PKMYT1-209ENST00000572658 DNAJC5BQ9UF47 199 aa26.08■■□□□ 1.77
PKMYT1-209ENST00000572658 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
PKMYT1-209ENST00000572658 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
PKMYT1-209ENST00000572658 SHROOM4Q9ULL8 1493 aa25.71■■□□□ 1.71
PKMYT1-209ENST00000572658 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
PKMYT1-209ENST00000572658 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
PKMYT1-209ENST00000572658 CECR2Q9BXF3 1484 aa25.27■■□□□ 1.64
PKMYT1-209ENST00000572658 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
PKMYT1-209ENST00000572658 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
PKMYT1-209ENST00000572658 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
PKMYT1-209ENST00000572658 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
PKMYT1-209ENST00000572658 BAZ1AQ9NRL2 1556 aaPredicted RBP24.53■■□□□ 1.52
PKMYT1-209ENST00000572658 HMGXB3Q12766 1538 aa24.45■■□□□ 1.51
PKMYT1-209ENST00000572658 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
PKMYT1-209ENST00000572658 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
PKMYT1-209ENST00000572658 MROH2BQ7Z745 1585 aa24.32■■□□□ 1.48
PKMYT1-209ENST00000572658 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
PKMYT1-209ENST00000572658 NESP48681 1621 aa24.13■■□□□ 1.45
PKMYT1-209ENST00000572658 CUX2O14529 1486 aa24.12■■□□□ 1.45
PKMYT1-209ENST00000572658 LAMC3Q9Y6N6 1575 aa24.05■■□□□ 1.44
PKMYT1-209ENST00000572658 WIZO95785 1651 aa24.04■■□□□ 1.44
PKMYT1-209ENST00000572658 PDS5BQ9NTI5 1447 aa23.93■■□□□ 1.42
PKMYT1-209ENST00000572658 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
PKMYT1-209ENST00000572658 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
PKMYT1-209ENST00000572658 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
PKMYT1-209ENST00000572658 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
PKMYT1-209ENST00000572658 KIF21AQ7Z4S6 1674 aa23.83■■□□□ 1.4
PKMYT1-209ENST00000572658 TOP2AP11388 1531 aaKnown RBP23.77■■□□□ 1.4
PKMYT1-209ENST00000572658 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
PKMYT1-209ENST00000572658 CFTRP13569 1480 aa23.65■■□□□ 1.38
PKMYT1-209ENST00000572658 CEP164Q9UPV0 1460 aa23.64■■□□□ 1.38
PKMYT1-209ENST00000572658 FANCD2Q9BXW9 1451 aa23.62■■□□□ 1.37
PKMYT1-209ENST00000572658 WDR62O43379 1518 aa23.59■■□□□ 1.37
PKMYT1-209ENST00000572658 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
PKMYT1-209ENST00000572658 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
PKMYT1-209ENST00000572658 URB2Q14146 1524 aaKnown RBP23.37■■□□□ 1.33
PKMYT1-209ENST00000572658 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
PKMYT1-209ENST00000572658 TOPBP1Q92547 1522 aa23.18■■□□□ 1.3
PKMYT1-209ENST00000572658 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
PKMYT1-209ENST00000572658 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
PKMYT1-209ENST00000572658 OSCARQ8IYS5 282 aa23.1■■□□□ 1.29
PKMYT1-209ENST00000572658 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
PKMYT1-209ENST00000572658 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
PKMYT1-209ENST00000572658 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
PKMYT1-209ENST00000572658 EIF4G3O43432 1585 aaKnown RBP22.94■■□□□ 1.26
PKMYT1-209ENST00000572658 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
PKMYT1-209ENST00000572658 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
PKMYT1-209ENST00000572658 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.262e-6■□□□□ 8.5
PKMYT1-209ENST00000572658 SOGA1O94964 1423 aa22.9■■□□□ 1.26
PKMYT1-209ENST00000572658 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
PKMYT1-209ENST00000572658 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
PKMYT1-209ENST00000572658 CUX1P39880 1505 aa22.83■■□□□ 1.25
PKMYT1-209ENST00000572658 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
PKMYT1-209ENST00000572658 FBLN2P98095 1184 aa22.79■■□□□ 1.24
PKMYT1-209ENST00000572658 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
PKMYT1-209ENST00000572658 CHD1O14646 1710 aa22.74■■□□□ 1.23
PKMYT1-209ENST00000572658 RIMBP3CA6NJZ7 1639 aa22.7■■□□□ 1.22
PKMYT1-209ENST00000572658 RIMBP3BA6NNM3 1639 aa22.7■■□□□ 1.22
PKMYT1-209ENST00000572658 RIMBP3Q9UFD9 1639 aa22.7■■□□□ 1.22
PKMYT1-209ENST00000572658 SNAPC4Q5SXM2 1469 aa22.67■■□□□ 1.22
PKMYT1-209ENST00000572658 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
PKMYT1-209ENST00000572658 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
PKMYT1-209ENST00000572658 ARHGEF11O15085 1522 aa22.65■■□□□ 1.22
PKMYT1-209ENST00000572658 MAGI1Q96QZ7 1491 aaPredicted RBP22.65■■□□□ 1.22
PKMYT1-209ENST00000572658 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
PKMYT1-209ENST00000572658 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
PKMYT1-209ENST00000572658 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
PKMYT1-209ENST00000572658 SYNJ2O15056 1496 aa22.56■■□□□ 1.2
PKMYT1-209ENST00000572658 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
PKMYT1-209ENST00000572658 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
PKMYT1-209ENST00000572658 SYNJ1O43426 1573 aa22.55■■□□□ 1.2
PKMYT1-209ENST00000572658 BIVM-ERCC5R4GMW8 1640 aa22.54■■□□□ 1.2
PKMYT1-209ENST00000572658 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
PKMYT1-209ENST00000572658 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
PKMYT1-209ENST00000572658 CLASP1Q7Z460 1538 aa22.47■■□□□ 1.19
PKMYT1-209ENST00000572658 ARAP1Q96P48 1450 aa22.42■■□□□ 1.18
PKMYT1-209ENST00000572658 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
PKMYT1-209ENST00000572658 ADAMTS12P58397 1594 aa22.35■■□□□ 1.17
PKMYT1-209ENST00000572658 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
PKMYT1-209ENST00000572658 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
PKMYT1-209ENST00000572658 NUP160Q12769 1436 aa22.26■■□□□ 1.15
PKMYT1-209ENST00000572658 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
PKMYT1-209ENST00000572658 CEP170Q5SW79 1584 aa22.23■■□□□ 1.15
PKMYT1-209ENST00000572658 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
PKMYT1-209ENST00000572658 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
PKMYT1-209ENST00000572658 ERCC6L2Q5T890 1561 aa22.11■■□□□ 1.13
PKMYT1-209ENST00000572658 IGF1RP08069 1367 aa22.1■■□□□ 1.13
PKMYT1-209ENST00000572658 JPH4Q96JJ6 628 aa22.09■■□□□ 1.13
PKMYT1-209ENST00000572658 CUL7Q14999 1698 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms