RNA–Protein interactions for RNA: ENST00000572343.1

AC139099.2-201, humanhuman

TSL 3 BASIC

Gene AC139099.2, Length 641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC139099.2-201ENST00000572343 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
AC139099.2-201ENST00000572343 ABCC9O60706 1549 aa29.54■■■□□ 2.32
AC139099.2-201ENST00000572343 CCDC180Q9P1Z9 1646 aa29.19■■■□□ 2.26
AC139099.2-201ENST00000572343 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
AC139099.2-201ENST00000572343 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
AC139099.2-201ENST00000572343 DNAJC5BQ9UF47 199 aa27.77■■■□□ 2.04
AC139099.2-201ENST00000572343 NACADO15069 1562 aa27.65■■■□□ 2.02
AC139099.2-201ENST00000572343 PABPN1Q86U42 306 aaKnown RBP eCLIP27.61■■■□□ 2.01
AC139099.2-201ENST00000572343 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
AC139099.2-201ENST00000572343 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
AC139099.2-201ENST00000572343 BICRAQ9NZM4 1560 aa27.13■■□□□ 1.93
AC139099.2-201ENST00000572343 ZCCHC6Q5VYS8 1495 aaKnown RBP27.08■■□□□ 1.93
AC139099.2-201ENST00000572343 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
AC139099.2-201ENST00000572343 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
AC139099.2-201ENST00000572343 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
AC139099.2-201ENST00000572343 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
AC139099.2-201ENST00000572343 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
AC139099.2-201ENST00000572343 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
AC139099.2-201ENST00000572343 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
AC139099.2-201ENST00000572343 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
AC139099.2-201ENST00000572343 SMARCA4P51532 1647 aa25.51■■□□□ 1.67
AC139099.2-201ENST00000572343 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
AC139099.2-201ENST00000572343 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
AC139099.2-201ENST00000572343 NESP48681 1621 aa25.37■■□□□ 1.65
AC139099.2-201ENST00000572343 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
AC139099.2-201ENST00000572343 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
AC139099.2-201ENST00000572343 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
AC139099.2-201ENST00000572343 BAZ1BQ9UIG0 1483 aaKnown RBP25.34■■□□□ 1.65
AC139099.2-201ENST00000572343 MROH2BQ7Z745 1585 aa25.29■■□□□ 1.64
AC139099.2-201ENST00000572343 CUX2O14529 1486 aa25.25■■□□□ 1.63
AC139099.2-201ENST00000572343 PEG3Q9GZU2 1588 aa25.13■■□□□ 1.61
AC139099.2-201ENST00000572343 WIZO95785 1651 aa24.99■■□□□ 1.59
AC139099.2-201ENST00000572343 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
AC139099.2-201ENST00000572343 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
AC139099.2-201ENST00000572343 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
AC139099.2-201ENST00000572343 PDS5BQ9NTI5 1447 aa24.9■■□□□ 1.58
AC139099.2-201ENST00000572343 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
AC139099.2-201ENST00000572343 RSF1Q96T23 1441 aaPredicted RBP24.75■■□□□ 1.55
AC139099.2-201ENST00000572343 MRC2Q9UBG0 1479 aa24.7■■□□□ 1.55
AC139099.2-201ENST00000572343 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
AC139099.2-201ENST00000572343 CEP164Q9UPV0 1460 aa24.62■■□□□ 1.53
AC139099.2-201ENST00000572343 WDR62O43379 1518 aa24.59■■□□□ 1.53
AC139099.2-201ENST00000572343 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.53
AC139099.2-201ENST00000572343 CFTRP13569 1480 aa24.54■■□□□ 1.52
AC139099.2-201ENST00000572343 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
AC139099.2-201ENST00000572343 URB2Q14146 1524 aaKnown RBP24.43■■□□□ 1.5
AC139099.2-201ENST00000572343 CCDC88BA6NC98 1476 aa24.39■■□□□ 1.5
AC139099.2-201ENST00000572343 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
AC139099.2-201ENST00000572343 ZNF608Q9ULD9 1512 aaPredicted RBP24.19■■□□□ 1.46
AC139099.2-201ENST00000572343 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
AC139099.2-201ENST00000572343 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
AC139099.2-201ENST00000572343 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
AC139099.2-201ENST00000572343 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
AC139099.2-201ENST00000572343 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.43
AC139099.2-201ENST00000572343 FBLN2P98095 1184 aa23.95■■□□□ 1.42
AC139099.2-201ENST00000572343 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
AC139099.2-201ENST00000572343 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
AC139099.2-201ENST00000572343 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
AC139099.2-201ENST00000572343 SUPT5HO00267 1087 aaKnown RBP23.91■■□□□ 1.42
AC139099.2-201ENST00000572343 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.42
AC139099.2-201ENST00000572343 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
AC139099.2-201ENST00000572343 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
AC139099.2-201ENST00000572343 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
AC139099.2-201ENST00000572343 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
AC139099.2-201ENST00000572343 TDRD9Q8NDG6 1382 aaKnown RBP23.86■■□□□ 1.41
AC139099.2-201ENST00000572343 SOGA1O94964 1423 aa23.82■■□□□ 1.4
AC139099.2-201ENST00000572343 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
AC139099.2-201ENST00000572343 CYB5RLQ6IPT4 315 aa23.79■■□□□ 1.4
AC139099.2-201ENST00000572343 CHD1O14646 1710 aa23.78■■□□□ 1.4
AC139099.2-201ENST00000572343 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
AC139099.2-201ENST00000572343 CUX1P39880 1505 aa23.74■■□□□ 1.39
AC139099.2-201ENST00000572343 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
AC139099.2-201ENST00000572343 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
AC139099.2-201ENST00000572343 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
AC139099.2-201ENST00000572343 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
AC139099.2-201ENST00000572343 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
AC139099.2-201ENST00000572343 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
AC139099.2-201ENST00000572343 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
AC139099.2-201ENST00000572343 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
AC139099.2-201ENST00000572343 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
AC139099.2-201ENST00000572343 CLASP1Q7Z460 1538 aa23.46■■□□□ 1.35
AC139099.2-201ENST00000572343 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
AC139099.2-201ENST00000572343 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
AC139099.2-201ENST00000572343 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
AC139099.2-201ENST00000572343 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
AC139099.2-201ENST00000572343 WRNQ14191 1432 aaPredicted RBP eCLIP23.36■■□□□ 1.33
AC139099.2-201ENST00000572343 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
AC139099.2-201ENST00000572343 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
AC139099.2-201ENST00000572343 ERCC6L2Q5T890 1561 aa23.25■■□□□ 1.31
AC139099.2-201ENST00000572343 BIVM-ERCC5R4GMW8 1640 aa23.25■■□□□ 1.31
AC139099.2-201ENST00000572343 ADAMTS12P58397 1594 aa23.23■■□□□ 1.31
AC139099.2-201ENST00000572343 CEP170Q5SW79 1584 aa23.2■■□□□ 1.3
AC139099.2-201ENST00000572343 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
AC139099.2-201ENST00000572343 NUP160Q12769 1436 aa23.15■■□□□ 1.3
AC139099.2-201ENST00000572343 ERICH3Q5RHP9 1530 aa23.08■■□□□ 1.29
AC139099.2-201ENST00000572343 PRG4Q92954 1404 aaPredicted RBP23.03■■□□□ 1.28
AC139099.2-201ENST00000572343 JPH4Q96JJ6 628 aa23.03■■□□□ 1.28
AC139099.2-201ENST00000572343 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
AC139099.2-201ENST00000572343 TTBK1Q5TCY1 1321 aaPredicted RBP22.93■■□□□ 1.26
AC139099.2-201ENST00000572343 IGF1RP08069 1367 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms