RNA–Protein interactions for RNA: ENST00000572179.5

ITGAE-207, Transcript of integrin subunit alpha E, humanhuman

TSL 1 (best)

Gene ITGAE, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-207ENST00000572179 NISCHQ9Y2I1 1504 aa39.21■■■■□ 3.87
ITGAE-207ENST00000572179 ABCC9O60706 1549 aa35.38■■■■□ 3.25
ITGAE-207ENST00000572179 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
ITGAE-207ENST00000572179 RB1CC1Q8TDY2 1594 aa33.58■■■□□ 2.97
ITGAE-207ENST00000572179 NACADO15069 1562 aa33.32■■■□□ 2.92
ITGAE-207ENST00000572179 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
ITGAE-207ENST00000572179 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
ITGAE-207ENST00000572179 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.86
ITGAE-207ENST00000572179 UNC13AQ9UPW8 1703 aa32.83■■■□□ 2.85
ITGAE-207ENST00000572179 MYO15BQ96JP2 1530 aa32.82■■■□□ 2.84
ITGAE-207ENST00000572179 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
ITGAE-207ENST00000572179 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
ITGAE-207ENST00000572179 DCAF1Q9Y4B6 1507 aa32.36■■■□□ 2.77
ITGAE-207ENST00000572179 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
ITGAE-207ENST00000572179 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
ITGAE-207ENST00000572179 CC2D2AQ9P2K1 1620 aa31.94■■■□□ 2.7
ITGAE-207ENST00000572179 CECR2Q9BXF3 1484 aa31.86■■■□□ 2.69
ITGAE-207ENST00000572179 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
ITGAE-207ENST00000572179 NCAPD3P42695 1498 aa30.76■■■□□ 2.52
ITGAE-207ENST00000572179 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
ITGAE-207ENST00000572179 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
ITGAE-207ENST00000572179 DNAJC5Q9H3Z4 198 aa30.59■■■□□ 2.49
ITGAE-207ENST00000572179 SMARCA2P51531 1590 aa30.57■■■□□ 2.48
ITGAE-207ENST00000572179 HMGXB3Q12766 1538 aa30.55■■■□□ 2.48
ITGAE-207ENST00000572179 ERCC6Q03468 1493 aa30.53■■■□□ 2.48
ITGAE-207ENST00000572179 CUX2O14529 1486 aa30.51■■■□□ 2.48
ITGAE-207ENST00000572179 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
ITGAE-207ENST00000572179 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
ITGAE-207ENST00000572179 NESP48681 1621 aa30.37■■■□□ 2.45
ITGAE-207ENST00000572179 PEG3Q9GZU2 1588 aa30.32■■■□□ 2.44
ITGAE-207ENST00000572179 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
ITGAE-207ENST00000572179 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
ITGAE-207ENST00000572179 LAMC3Q9Y6N6 1575 aa30.09■■■□□ 2.41
ITGAE-207ENST00000572179 KIF21AQ7Z4S6 1674 aa29.95■■■□□ 2.39
ITGAE-207ENST00000572179 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
ITGAE-207ENST00000572179 WIZO95785 1651 aa29.86■■■□□ 2.37
ITGAE-207ENST00000572179 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
ITGAE-207ENST00000572179 MRC2Q9UBG0 1479 aa29.69■■■□□ 2.34
ITGAE-207ENST00000572179 WDR62O43379 1518 aa29.63■■■□□ 2.33
ITGAE-207ENST00000572179 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
ITGAE-207ENST00000572179 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
ITGAE-207ENST00000572179 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.31
ITGAE-207ENST00000572179 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
ITGAE-207ENST00000572179 CFTRP13569 1480 aa29.48■■■□□ 2.31
ITGAE-207ENST00000572179 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
ITGAE-207ENST00000572179 TRIM41Q8WV44 630 aa29.23■■■□□ 2.27
ITGAE-207ENST00000572179 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
ITGAE-207ENST00000572179 CCDC88BA6NC98 1476 aa29.13■■■□□ 2.25
ITGAE-207ENST00000572179 OSCARQ8IYS5 282 aa29.04■■■□□ 2.24
ITGAE-207ENST00000572179 ZNF608Q9ULD9 1512 aaPredicted RBP28.96■■■□□ 2.23
ITGAE-207ENST00000572179 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
ITGAE-207ENST00000572179 TOPBP1Q92547 1522 aa28.94■■■□□ 2.22
ITGAE-207ENST00000572179 DNMBPQ6XZF7 1577 aa28.83■■■□□ 2.21
ITGAE-207ENST00000572179 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
ITGAE-207ENST00000572179 EIF4G3O43432 1585 aaKnown RBP28.79■■■□□ 2.2
ITGAE-207ENST00000572179 RIMBP3CA6NJZ7 1639 aa28.76■■■□□ 2.19
ITGAE-207ENST00000572179 RIMBP3BA6NNM3 1639 aa28.76■■■□□ 2.19
ITGAE-207ENST00000572179 RIMBP3Q9UFD9 1639 aa28.76■■■□□ 2.19
ITGAE-207ENST00000572179 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
ITGAE-207ENST00000572179 ARHGEF11O15085 1522 aa28.66■■■□□ 2.18
ITGAE-207ENST00000572179 AQRO60306 1485 aaKnown RBP eCLIP28.66■■■□□ 2.18
ITGAE-207ENST00000572179 POLA1P09884 1462 aaPredicted RBP28.66■■■□□ 2.18
ITGAE-207ENST00000572179 CHD1O14646 1710 aa28.58■■■□□ 2.17
ITGAE-207ENST00000572179 RAD54L2Q9Y4B4 1467 aa28.55■■■□□ 2.16
ITGAE-207ENST00000572179 SOGA1O94964 1423 aa28.48■■■□□ 2.15
ITGAE-207ENST00000572179 FBLN2P98095 1184 aa28.46■■■□□ 2.15
ITGAE-207ENST00000572179 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
ITGAE-207ENST00000572179 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
ITGAE-207ENST00000572179 CUX1P39880 1505 aa28.42■■■□□ 2.14
ITGAE-207ENST00000572179 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
ITGAE-207ENST00000572179 ARAP1Q96P48 1450 aa28.4■■■□□ 2.14
ITGAE-207ENST00000572179 SNAPC4Q5SXM2 1469 aa28.39■■■□□ 2.13
ITGAE-207ENST00000572179 WDR97A6NE52 1622 aa28.36■■■□□ 2.13
ITGAE-207ENST00000572179 MAGI1Q96QZ7 1491 aaPredicted RBP28.27■■■□□ 2.12
ITGAE-207ENST00000572179 CLASP1Q7Z460 1538 aa28.27■■■□□ 2.12
ITGAE-207ENST00000572179 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
ITGAE-207ENST00000572179 CHMP7Q8WUX9 453 aaPredicted RBP28.22■■■□□ 2.11
ITGAE-207ENST00000572179 SYNJ1O43426 1573 aa28.2■■■□□ 2.11
ITGAE-207ENST00000572179 SYNJ2O15056 1496 aa28.18■■■□□ 2.1
ITGAE-207ENST00000572179 PBRM1Q86U86 1689 aa28.16■■■□□ 2.1
ITGAE-207ENST00000572179 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
ITGAE-207ENST00000572179 SUPT5HO00267 1087 aaKnown RBP28.14■■■□□ 2.1
ITGAE-207ENST00000572179 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
ITGAE-207ENST00000572179 ABCA10Q8WWZ4 1543 aa28.11■■■□□ 2.09
ITGAE-207ENST00000572179 ABCA5Q8WWZ7 1642 aa28.1■■■□□ 2.09
ITGAE-207ENST00000572179 WRNQ14191 1432 aaPredicted RBP eCLIP27.95■■■□□ 2.07
ITGAE-207ENST00000572179 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
ITGAE-207ENST00000572179 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
ITGAE-207ENST00000572179 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
ITGAE-207ENST00000572179 GRIN2AQ12879 1464 aa27.9■■■□□ 2.06
ITGAE-207ENST00000572179 ERCC6L2Q5T890 1561 aa27.85■■■□□ 2.05
ITGAE-207ENST00000572179 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
ITGAE-207ENST00000572179 NUP160Q12769 1436 aa27.83■■■□□ 2.05
ITGAE-207ENST00000572179 FHAD1B1AJZ9 1412 aa27.78■■■□□ 2.04
ITGAE-207ENST00000572179 ERICH3Q5RHP9 1530 aa27.75■■■□□ 2.03
ITGAE-207ENST00000572179 SHROOM2Q13796 1616 aa27.71■■■□□ 2.03
ITGAE-207ENST00000572179 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
ITGAE-207ENST00000572179 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
ITGAE-207ENST00000572179 JPH4Q96JJ6 628 aa27.49■■□□□ 1.99
ITGAE-207ENST00000572179 KIF13AQ9H1H9 1805 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms