RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 NISCHQ9Y2I1 1504 aa38.94■■■■□ 3.82
TSR1-202ENST00000571806 CCDC180Q9P1Z9 1646 aa34.99■■■■□ 3.19
TSR1-202ENST00000571806 ABCC9O60706 1549 aa34.91■■■■□ 3.18
TSR1-202ENST00000571806 RB1CC1Q8TDY2 1594 aa33.33■■■□□ 2.93
TSR1-202ENST00000571806 NACADO15069 1562 aa33.11■■■□□ 2.89
TSR1-202ENST00000571806 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
TSR1-202ENST00000571806 DNAJC5BQ9UF47 199 aa32.75■■■□□ 2.83
TSR1-202ENST00000571806 MYO15BQ96JP2 1530 aa32.7■■■□□ 2.83
TSR1-202ENST00000571806 PABPN1Q86U42 306 aaKnown RBP eCLIP32.49■■■□□ 2.79
TSR1-202ENST00000571806 UNC13AQ9UPW8 1703 aa32.48■■■□□ 2.79
TSR1-202ENST00000571806 BICRAQ9NZM4 1560 aa32.27■■■□□ 2.76
TSR1-202ENST00000571806 ZCCHC6Q5VYS8 1495 aaKnown RBP32.25■■■□□ 2.75
TSR1-202ENST00000571806 DCAF1Q9Y4B6 1507 aa32.23■■■□□ 2.75
TSR1-202ENST00000571806 SHROOM4Q9ULL8 1493 aa32■■■□□ 2.71
TSR1-202ENST00000571806 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
TSR1-202ENST00000571806 CC2D2AQ9P2K1 1620 aa31.57■■■□□ 2.64
TSR1-202ENST00000571806 EIF4G1Q04637 1599 aaKnown RBP31.51■■■□□ 2.64
TSR1-202ENST00000571806 CECR2Q9BXF3 1484 aa31.51■■■□□ 2.63
TSR1-202ENST00000571806 NCAPD3P42695 1498 aa30.56■■■□□ 2.48
TSR1-202ENST00000571806 ATAD2BQ9ULI0 1458 aa30.41■■■□□ 2.46
TSR1-202ENST00000571806 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
TSR1-202ENST00000571806 SMARCA4P51532 1647 aa30.36■■■□□ 2.45
TSR1-202ENST00000571806 HMGXB3Q12766 1538 aa30.32■■■□□ 2.44
TSR1-202ENST00000571806 BAZ1AQ9NRL2 1556 aaPredicted RBP30.26■■■□□ 2.43
TSR1-202ENST00000571806 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
TSR1-202ENST00000571806 CUX2O14529 1486 aa30.22■■■□□ 2.43
TSR1-202ENST00000571806 ERCC6Q03468 1493 aa30.22■■■□□ 2.43
TSR1-202ENST00000571806 BAZ1BQ9UIG0 1483 aaKnown RBP30.13■■■□□ 2.41
TSR1-202ENST00000571806 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
TSR1-202ENST00000571806 NESP48681 1621 aa29.96■■■□□ 2.39
TSR1-202ENST00000571806 MROH2BQ7Z745 1585 aa29.94■■■□□ 2.38
TSR1-202ENST00000571806 LAMC3Q9Y6N6 1575 aa29.88■■■□□ 2.37
TSR1-202ENST00000571806 PDS5BQ9NTI5 1447 aa29.72■■■□□ 2.35
TSR1-202ENST00000571806 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
TSR1-202ENST00000571806 CADPSQ9ULU8 1353 aa29.62■■■□□ 2.33
TSR1-202ENST00000571806 KIF21AQ7Z4S6 1674 aa29.6■■■□□ 2.33
TSR1-202ENST00000571806 WIZO95785 1651 aa29.57■■■□□ 2.32
TSR1-202ENST00000571806 MRC2Q9UBG0 1479 aa29.42■■■□□ 2.3
TSR1-202ENST00000571806 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
TSR1-202ENST00000571806 WDR62O43379 1518 aa29.34■■■□□ 2.29
TSR1-202ENST00000571806 CEP164Q9UPV0 1460 aa29.29■■■□□ 2.28
TSR1-202ENST00000571806 CFTRP13569 1480 aa29.26■■■□□ 2.27
TSR1-202ENST00000571806 TOP2AP11388 1531 aaKnown RBP29.25■■■□□ 2.27
TSR1-202ENST00000571806 FANCD2Q9BXW9 1451 aa29.24■■■□□ 2.27
TSR1-202ENST00000571806 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
TSR1-202ENST00000571806 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
TSR1-202ENST00000571806 CCDC88BA6NC98 1476 aa28.91■■■□□ 2.22
TSR1-202ENST00000571806 OSCARQ8IYS5 282 aa28.85■■■□□ 2.21
TSR1-202ENST00000571806 TRIM41Q8WV44 630 aa28.8■■■□□ 2.2
TSR1-202ENST00000571806 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
TSR1-202ENST00000571806 IFT140Q96RY7 1462 aa28.73■■■□□ 2.19
TSR1-202ENST00000571806 TOPBP1Q92547 1522 aa28.68■■■□□ 2.18
TSR1-202ENST00000571806 ZNF608Q9ULD9 1512 aaPredicted RBP28.59■■■□□ 2.17
TSR1-202ENST00000571806 DNMBPQ6XZF7 1577 aa28.59■■■□□ 2.17
TSR1-202ENST00000571806 EIF4G3O43432 1585 aaKnown RBP28.47■■■□□ 2.15
TSR1-202ENST00000571806 TARBP1Q13395 1621 aaKnown RBP28.42■■■□□ 2.14
TSR1-202ENST00000571806 RIMBP3CA6NJZ7 1639 aa28.38■■■□□ 2.13
TSR1-202ENST00000571806 RIMBP3BA6NNM3 1639 aa28.38■■■□□ 2.13
TSR1-202ENST00000571806 RIMBP3Q9UFD9 1639 aa28.38■■■□□ 2.13
TSR1-202ENST00000571806 POLA1P09884 1462 aaPredicted RBP28.38■■■□□ 2.13
TSR1-202ENST00000571806 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.133e-8■■■■■ 49.5
TSR1-202ENST00000571806 ARHGEF11O15085 1522 aa28.3■■■□□ 2.12
TSR1-202ENST00000571806 SOGA1O94964 1423 aa28.29■■■□□ 2.12
TSR1-202ENST00000571806 WDR97A6NE52 1622 aa28.25■■■□□ 2.11
TSR1-202ENST00000571806 CHD1O14646 1710 aa28.24■■■□□ 2.11
TSR1-202ENST00000571806 RAD54L2Q9Y4B4 1467 aa28.23■■■□□ 2.11
TSR1-202ENST00000571806 FBLN2P98095 1184 aa28.21■■■□□ 2.11
TSR1-202ENST00000571806 FGD5Q6ZNL6 1462 aa28.19■■■□□ 2.1
TSR1-202ENST00000571806 TDRD9Q8NDG6 1382 aaKnown RBP28.18■■■□□ 2.1
TSR1-202ENST00000571806 CUX1P39880 1505 aa28.13■■■□□ 2.09
TSR1-202ENST00000571806 CYB5RLQ6IPT4 315 aa28.11■■■□□ 2.09
TSR1-202ENST00000571806 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
TSR1-202ENST00000571806 SNAPC4Q5SXM2 1469 aa28.07■■■□□ 2.08
TSR1-202ENST00000571806 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
TSR1-202ENST00000571806 CHMP7Q8WUX9 453 aaPredicted RBP28.05■■■□□ 2.08
TSR1-202ENST00000571806 ARAP1Q96P48 1450 aa28■■■□□ 2.07
TSR1-202ENST00000571806 SYNJ1O43426 1573 aa27.99■■■□□ 2.07
TSR1-202ENST00000571806 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
TSR1-202ENST00000571806 SYNJ2O15056 1496 aa27.96■■■□□ 2.07
TSR1-202ENST00000571806 CLASP1Q7Z460 1538 aa27.95■■■□□ 2.06
TSR1-202ENST00000571806 GAPVD1Q14C86 1478 aa27.93■■■□□ 2.06
TSR1-202ENST00000571806 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
TSR1-202ENST00000571806 PBRM1Q86U86 1689 aa27.89■■■□□ 2.06
TSR1-202ENST00000571806 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
TSR1-202ENST00000571806 TRHP20396 242 aaPredicted RBP27.83■■■□□ 2.05
TSR1-202ENST00000571806 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
TSR1-202ENST00000571806 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
TSR1-202ENST00000571806 BIVM-ERCC5R4GMW8 1640 aa27.73■■■□□ 2.03
TSR1-202ENST00000571806 GRIN2AQ12879 1464 aa27.67■■■□□ 2.02
TSR1-202ENST00000571806 ADAMTS12P58397 1594 aa27.61■■■□□ 2.01
TSR1-202ENST00000571806 FHAD1B1AJZ9 1412 aa27.6■■■□□ 2.01
TSR1-202ENST00000571806 ERICH3Q5RHP9 1530 aa27.59■■■□□ 2.01
TSR1-202ENST00000571806 NUP160Q12769 1436 aa27.58■■■□□ 2.01
TSR1-202ENST00000571806 CEP170Q5SW79 1584 aa27.53■■■□□ 2
TSR1-202ENST00000571806 SHROOM2Q13796 1616 aa27.46■■□□□ 1.99
TSR1-202ENST00000571806 ERCC6L2Q5T890 1561 aa27.43■■□□□ 1.98
TSR1-202ENST00000571806 JPH4Q96JJ6 628 aa27.33■■□□□ 1.97
TSR1-202ENST00000571806 PRG4Q92954 1404 aaPredicted RBP27.31■■□□□ 1.96
TSR1-202ENST00000571806 RUSC2Q8N2Y8 1516 aa27.23■■□□□ 1.95
TSR1-202ENST00000571806 KIF27Q86VH2 1401 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms