RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
TRAPPC1-203ENST00000571739 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
TRAPPC1-203ENST00000571739 ABCC9O60706 1549 aa18.24■□□□□ 0.51
TRAPPC1-203ENST00000571739 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
TRAPPC1-203ENST00000571739 NACADO15069 1562 aa17.5■□□□□ 0.39
TRAPPC1-203ENST00000571739 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
TRAPPC1-203ENST00000571739 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
TRAPPC1-203ENST00000571739 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
TRAPPC1-203ENST00000571739 DCAF1Q9Y4B6 1507 aa17.37■□□□□ 0.37
TRAPPC1-203ENST00000571739 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRAPPC1-203ENST00000571739 UNC13AQ9UPW8 1703 aa17.11■□□□□ 0.33
TRAPPC1-203ENST00000571739 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
TRAPPC1-203ENST00000571739 SCRIBQ14160 1630 aa16.99■□□□□ 0.31
TRAPPC1-203ENST00000571739 DNAJC5BQ9UF47 199 aa16.86■□□□□ 0.29
TRAPPC1-203ENST00000571739 SHROOM4Q9ULL8 1493 aa16.74■□□□□ 0.27
TRAPPC1-203ENST00000571739 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
TRAPPC1-203ENST00000571739 CC2D2AQ9P2K1 1620 aa16.47■□□□□ 0.23
TRAPPC1-203ENST00000571739 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
TRAPPC1-203ENST00000571739 SMARCA4P51532 1647 aa16.27■□□□□ 0.19
TRAPPC1-203ENST00000571739 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC1-203ENST00000571739 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
TRAPPC1-203ENST00000571739 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
TRAPPC1-203ENST00000571739 NCAPD3P42695 1498 aa16.22■□□□□ 0.19
TRAPPC1-203ENST00000571739 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
TRAPPC1-203ENST00000571739 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
TRAPPC1-203ENST00000571739 RSF1Q96T23 1441 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC1-203ENST00000571739 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
TRAPPC1-203ENST00000571739 BAZ1BQ9UIG0 1483 aaKnown RBP16.04■□□□□ 0.16
TRAPPC1-203ENST00000571739 WIZO95785 1651 aa16.03■□□□□ 0.16
TRAPPC1-203ENST00000571739 TOP2AP11388 1531 aaKnown RBP15.83■□□□□ 0.12
TRAPPC1-203ENST00000571739 NESP48681 1621 aa15.83■□□□□ 0.12
TRAPPC1-203ENST00000571739 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
TRAPPC1-203ENST00000571739 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
TRAPPC1-203ENST00000571739 CCDC88BA6NC98 1476 aa15.71■□□□□ 0.11
TRAPPC1-203ENST00000571739 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
TRAPPC1-203ENST00000571739 ERCC6Q03468 1493 aa15.66■□□□□ 0.1
TRAPPC1-203ENST00000571739 CFTRP13569 1480 aa15.65■□□□□ 0.1
TRAPPC1-203ENST00000571739 PDS5BQ9NTI5 1447 aa15.63■□□□□ 0.09
TRAPPC1-203ENST00000571739 KIF21AQ7Z4S6 1674 aa15.55■□□□□ 0.08
TRAPPC1-203ENST00000571739 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
TRAPPC1-203ENST00000571739 THOC2Q8NI27 1593 aaKnown RBP15.49■□□□□ 0.07
TRAPPC1-203ENST00000571739 CUX2O14529 1486 aa15.48■□□□□ 0.07
TRAPPC1-203ENST00000571739 CEP164Q9UPV0 1460 aa15.47■□□□□ 0.07
TRAPPC1-203ENST00000571739 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
TRAPPC1-203ENST00000571739 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
TRAPPC1-203ENST00000571739 WDR62O43379 1518 aa15.39■□□□□ 0.05
TRAPPC1-203ENST00000571739 URB2Q14146 1524 aaKnown RBP15.39■□□□□ 0.05
TRAPPC1-203ENST00000571739 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
TRAPPC1-203ENST00000571739 ABCC8Q09428 1581 aa15.27■□□□□ 0.03
TRAPPC1-203ENST00000571739 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
TRAPPC1-203ENST00000571739 CUX1P39880 1505 aa15.2■□□□□ 0.02
TRAPPC1-203ENST00000571739 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC1-203ENST00000571739 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
TRAPPC1-203ENST00000571739 RAD54L2Q9Y4B4 1467 aa15.15■□□□□ 0.02
TRAPPC1-203ENST00000571739 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC1-203ENST00000571739 SOGA1O94964 1423 aa15.14■□□□□ 0.01
TRAPPC1-203ENST00000571739 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
TRAPPC1-203ENST00000571739 WRNQ14191 1432 aaPredicted RBP eCLIP15.12■□□□□ 0.01
TRAPPC1-203ENST00000571739 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
TRAPPC1-203ENST00000571739 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
TRAPPC1-203ENST00000571739 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0.012e-6■■■□□ 15.2
TRAPPC1-203ENST00000571739 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
TRAPPC1-203ENST00000571739 SYNJ1O43426 1573 aa15.06■□□□□ 0
TRAPPC1-203ENST00000571739 TOP2BQ02880 1626 aa15.04■□□□□ -0
TRAPPC1-203ENST00000571739 BIVM-ERCC5R4GMW8 1640 aa15.03■□□□□ -0
TRAPPC1-203ENST00000571739 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
TRAPPC1-203ENST00000571739 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
TRAPPC1-203ENST00000571739 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
TRAPPC1-203ENST00000571739 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
TRAPPC1-203ENST00000571739 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
TRAPPC1-203ENST00000571739 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
TRAPPC1-203ENST00000571739 FBLN2P98095 1184 aa14.9□□□□□ -0.02
TRAPPC1-203ENST00000571739 SNAPC4Q5SXM2 1469 aa14.89□□□□□ -0.03
TRAPPC1-203ENST00000571739 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
TRAPPC1-203ENST00000571739 CHMP7Q8WUX9 453 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC1-203ENST00000571739 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
TRAPPC1-203ENST00000571739 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
TRAPPC1-203ENST00000571739 PBRM1Q86U86 1689 aa14.82□□□□□ -0.04
TRAPPC1-203ENST00000571739 IGF1RP08069 1367 aa14.81□□□□□ -0.04
TRAPPC1-203ENST00000571739 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
TRAPPC1-203ENST00000571739 CHD1O14646 1710 aa14.8□□□□□ -0.04
TRAPPC1-203ENST00000571739 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
TRAPPC1-203ENST00000571739 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
TRAPPC1-203ENST00000571739 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
TRAPPC1-203ENST00000571739 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
TRAPPC1-203ENST00000571739 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
TRAPPC1-203ENST00000571739 GRIN2AQ12879 1464 aa14.72□□□□□ -0.05
TRAPPC1-203ENST00000571739 ADAMTS12P58397 1594 aa14.72□□□□□ -0.05
TRAPPC1-203ENST00000571739 CARMIL1Q5VZK9 1371 aa14.69□□□□□ -0.06
TRAPPC1-203ENST00000571739 NUP160Q12769 1436 aa14.67□□□□□ -0.06
TRAPPC1-203ENST00000571739 CLASP1Q7Z460 1538 aa14.67□□□□□ -0.06
TRAPPC1-203ENST00000571739 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
TRAPPC1-203ENST00000571739 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
TRAPPC1-203ENST00000571739 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
TRAPPC1-203ENST00000571739 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
TRAPPC1-203ENST00000571739 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
TRAPPC1-203ENST00000571739 CSRNP3Q8WYN3 585 aa14.6□□□□□ -0.07
TRAPPC1-203ENST00000571739 JPH4Q96JJ6 628 aa14.6□□□□□ -0.07
TRAPPC1-203ENST00000571739 CUL7Q14999 1698 aa14.6□□□□□ -0.07
TRAPPC1-203ENST00000571739 CYB5RLQ6IPT4 315 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms