RNA–Protein interactions for RNA: ENST00000571721.5

ACTG1-204, Transcript of actin gamma 1, humanhuman

TSL 5

Gene ACTG1, Length 813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-204ENST00000571721 NISCHQ9Y2I1 1504 aa47.1■■■■■ 5.13
ACTG1-204ENST00000571721 CCDC180Q9P1Z9 1646 aa42.17■■■■■ 4.34
ACTG1-204ENST00000571721 ABCC9O60706 1549 aa42■■■■■ 4.31
ACTG1-204ENST00000571721 RB1CC1Q8TDY2 1594 aa40.02■■■■■ 4
ACTG1-204ENST00000571721 NACADO15069 1562 aa39.8■■■■□ 3.96
ACTG1-204ENST00000571721 DCAF8L2P0C7V8 631 aa39.58■■■■□ 3.93
ACTG1-204ENST00000571721 DNAJC5BQ9UF47 199 aa39.33■■■■□ 3.89
ACTG1-204ENST00000571721 MYO15BQ96JP2 1530 aa39.33■■■■□ 3.89
ACTG1-204ENST00000571721 UNC13AQ9UPW8 1703 aa39.26■■■■□ 3.87
ACTG1-204ENST00000571721 PABPN1Q86U42 306 aaKnown RBP eCLIP39.14■■■■□ 3.86
ACTG1-204ENST00000571721 ZCCHC6Q5VYS8 1495 aaKnown RBP39.06■■■■□ 3.84
ACTG1-204ENST00000571721 BICRAQ9NZM4 1560 aa38.95■■■■□ 3.83
ACTG1-204ENST00000571721 DCAF1Q9Y4B6 1507 aa38.9■■■■□ 3.82
ACTG1-204ENST00000571721 SCRIBQ14160 1630 aa38.43■■■■□ 3.74
ACTG1-204ENST00000571721 SHROOM4Q9ULL8 1493 aa38.33■■■■□ 3.73
ACTG1-204ENST00000571721 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
ACTG1-204ENST00000571721 EIF4G1Q04637 1599 aaKnown RBP37.92■■■■□ 3.66
ACTG1-204ENST00000571721 CECR2Q9BXF3 1484 aa37.8■■■■□ 3.64
ACTG1-204ENST00000571721 NCAPD3P42695 1498 aa36.77■■■■□ 3.48
ACTG1-204ENST00000571721 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
ACTG1-204ENST00000571721 ATAD2BQ9ULI0 1458 aa36.69■■■■□ 3.46
ACTG1-204ENST00000571721 SMARCA2P51531 1590 aa36.55■■■■□ 3.44
ACTG1-204ENST00000571721 HMGXB3Q12766 1538 aa36.5■■■■□ 3.43
ACTG1-204ENST00000571721 BAZ1AQ9NRL2 1556 aaPredicted RBP36.5■■■■□ 3.43
ACTG1-204ENST00000571721 PEG3Q9GZU2 1588 aa36.36■■■■□ 3.41
ACTG1-204ENST00000571721 MROH2BQ7Z745 1585 aa36.32■■■■□ 3.4
ACTG1-204ENST00000571721 BAZ1BQ9UIG0 1483 aaKnown RBP36.3■■■■□ 3.4
ACTG1-204ENST00000571721 ERCC6Q03468 1493 aa36.18■■■■□ 3.38
ACTG1-204ENST00000571721 NESP48681 1621 aa36.17■■■■□ 3.38
ACTG1-204ENST00000571721 CUX2O14529 1486 aa36.09■■■■□ 3.37
ACTG1-204ENST00000571721 DNAJC5Q9H3Z4 198 aa35.9■■■■□ 3.34
ACTG1-204ENST00000571721 WIZO95785 1651 aa35.89■■■■□ 3.34
ACTG1-204ENST00000571721 LAMC3Q9Y6N6 1575 aa35.89■■■■□ 3.34
ACTG1-204ENST00000571721 THOC2Q8NI27 1593 aaKnown RBP35.76■■■■□ 3.32
ACTG1-204ENST00000571721 KIF21AQ7Z4S6 1674 aa35.71■■■■□ 3.31
ACTG1-204ENST00000571721 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
ACTG1-204ENST00000571721 PDS5BQ9NTI5 1447 aa35.64■■■■□ 3.3
ACTG1-204ENST00000571721 RSF1Q96T23 1441 aaPredicted RBP35.61■■■■□ 3.29
ACTG1-204ENST00000571721 TOP2AP11388 1531 aaKnown RBP35.41■■■■□ 3.26
ACTG1-204ENST00000571721 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
ACTG1-204ENST00000571721 CFTRP13569 1480 aa35.29■■■■□ 3.24
ACTG1-204ENST00000571721 WDR62O43379 1518 aa35.29■■■■□ 3.24
ACTG1-204ENST00000571721 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
ACTG1-204ENST00000571721 CEP164Q9UPV0 1460 aa35.23■■■■□ 3.23
ACTG1-204ENST00000571721 CCDC88BA6NC98 1476 aa35.03■■■■□ 3.2
ACTG1-204ENST00000571721 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
ACTG1-204ENST00000571721 URB2Q14146 1524 aaKnown RBP34.98■■■■□ 3.19
ACTG1-204ENST00000571721 TOPBP1Q92547 1522 aa34.61■■■■□ 3.13
ACTG1-204ENST00000571721 IFT140Q96RY7 1462 aa34.52■■■■□ 3.12
ACTG1-204ENST00000571721 ZNF608Q9ULD9 1512 aaPredicted RBP34.52■■■■□ 3.12
ACTG1-204ENST00000571721 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
ACTG1-204ENST00000571721 ABCC8Q09428 1581 aa34.48■■■■□ 3.11
ACTG1-204ENST00000571721 OSCARQ8IYS5 282 aa34.45■■■■□ 3.11
ACTG1-204ENST00000571721 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
ACTG1-204ENST00000571721 TARBP1Q13395 1621 aaKnown RBP34.33■■■■□ 3.09
ACTG1-204ENST00000571721 EIF4G3O43432 1585 aaKnown RBP34.31■■■■□ 3.08
ACTG1-204ENST00000571721 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
ACTG1-204ENST00000571721 AQRO60306 1485 aaKnown RBP eCLIP34.21■■■■□ 3.074e-13■■■■■ 34.6
ACTG1-204ENST00000571721 RAD54L2Q9Y4B4 1467 aa34.15■■■■□ 3.06
ACTG1-204ENST00000571721 CUX1P39880 1505 aa34.11■■■■□ 3.05
ACTG1-204ENST00000571721 SUPT5HO00267 1087 aaKnown RBP34.1■■■■□ 3.05
ACTG1-204ENST00000571721 SOGA1O94964 1423 aa34.09■■■■□ 3.05
ACTG1-204ENST00000571721 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.04
ACTG1-204ENST00000571721 RIMBP3CA6NJZ7 1639 aa34.05■■■■□ 3.04
ACTG1-204ENST00000571721 RIMBP3BA6NNM3 1639 aa34.05■■■■□ 3.04
ACTG1-204ENST00000571721 RIMBP3Q9UFD9 1639 aa34.05■■■■□ 3.04
ACTG1-204ENST00000571721 CHD1O14646 1710 aa34.05■■■■□ 3.04
ACTG1-204ENST00000571721 TDRD9Q8NDG6 1382 aaKnown RBP34.01■■■■□ 3.04
ACTG1-204ENST00000571721 ARHGEF11O15085 1522 aa33.95■■■■□ 3.03
ACTG1-204ENST00000571721 WDR97A6NE52 1622 aa33.91■■■■□ 3.02
ACTG1-204ENST00000571721 FBLN2P98095 1184 aa33.87■■■■□ 3.01
ACTG1-204ENST00000571721 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
ACTG1-204ENST00000571721 GRIN2BQ13224 1484 aa33.76■■■■□ 3
ACTG1-204ENST00000571721 MAGI1Q96QZ7 1491 aaPredicted RBP33.75■■■□□ 2.99
ACTG1-204ENST00000571721 ABCA10Q8WWZ4 1543 aa33.7■■■□□ 2.99
ACTG1-204ENST00000571721 PBRM1Q86U86 1689 aa33.69■■■□□ 2.98
ACTG1-204ENST00000571721 GAPVD1Q14C86 1478 aa33.68■■■□□ 2.98
ACTG1-204ENST00000571721 CYB5RLQ6IPT4 315 aa33.66■■■□□ 2.98
ACTG1-204ENST00000571721 CLASP1Q7Z460 1538 aa33.66■■■□□ 2.98
ACTG1-204ENST00000571721 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
ACTG1-204ENST00000571721 ARAP1Q96P48 1450 aa33.65■■■□□ 2.98
ACTG1-204ENST00000571721 CHMP7Q8WUX9 453 aaPredicted RBP33.65■■■□□ 2.98
ACTG1-204ENST00000571721 SYNJ2O15056 1496 aa33.63■■■□□ 2.97
ACTG1-204ENST00000571721 BIVM-ERCC5R4GMW8 1640 aa33.6■■■□□ 2.97
ACTG1-204ENST00000571721 TOP2BQ02880 1626 aa33.58■■■□□ 2.97
ACTG1-204ENST00000571721 SYNJ1O43426 1573 aa33.58■■■□□ 2.97
ACTG1-204ENST00000571721 WRNQ14191 1432 aaPredicted RBP eCLIP33.55■■■□□ 2.961e-8■□□□□ 10.4
ACTG1-204ENST00000571721 ADAMTS12P58397 1594 aa33.37■■■□□ 2.93
ACTG1-204ENST00000571721 GRIN2AQ12879 1464 aa33.34■■■□□ 2.93
ACTG1-204ENST00000571721 ERICH3Q5RHP9 1530 aa33.26■■■□□ 2.91
ACTG1-204ENST00000571721 CEP170Q5SW79 1584 aa33.26■■■□□ 2.91
ACTG1-204ENST00000571721 FHAD1B1AJZ9 1412 aa33.25■■■□□ 2.91
ACTG1-204ENST00000571721 NUP160Q12769 1436 aa33.25■■■□□ 2.91
ACTG1-204ENST00000571721 ERCC6L2Q5T890 1561 aa33.19■■■□□ 2.9
ACTG1-204ENST00000571721 TRHP20396 242 aaPredicted RBP33.16■■■□□ 2.9
ACTG1-204ENST00000571721 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
ACTG1-204ENST00000571721 IGF1RP08069 1367 aa32.92■■■□□ 2.86
ACTG1-204ENST00000571721 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
ACTG1-204ENST00000571721 PRG4Q92954 1404 aaPredicted RBP32.88■■■□□ 2.85
ACTG1-204ENST00000571721 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms