RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 NISCHQ9Y2I1 1504 aa28.42■■■□□ 2.14
NPLOC4-206ENST00000571714 ABCC9O60706 1549 aa25.71■■□□□ 1.71
NPLOC4-206ENST00000571714 CCDC180Q9P1Z9 1646 aa25.59■■□□□ 1.69
NPLOC4-206ENST00000571714 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
NPLOC4-206ENST00000571714 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
NPLOC4-206ENST00000571714 NACADO15069 1562 aa24.19■■□□□ 1.46
NPLOC4-206ENST00000571714 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
NPLOC4-206ENST00000571714 UNC13AQ9UPW8 1703 aa23.9■■□□□ 1.42
NPLOC4-206ENST00000571714 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
NPLOC4-206ENST00000571714 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
NPLOC4-206ENST00000571714 BICRAQ9NZM4 1560 aa23.76■■□□□ 1.39
NPLOC4-206ENST00000571714 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
NPLOC4-206ENST00000571714 DCAF1Q9Y4B6 1507 aa23.47■■□□□ 1.35
NPLOC4-206ENST00000571714 SHROOM4Q9ULL8 1493 aa23.37■■□□□ 1.33
NPLOC4-206ENST00000571714 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
NPLOC4-206ENST00000571714 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
NPLOC4-206ENST00000571714 CECR2Q9BXF3 1484 aa23.17■■□□□ 1.3
NPLOC4-206ENST00000571714 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-206ENST00000571714 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
NPLOC4-206ENST00000571714 NCAPD3P42695 1498 aa22.34■■□□□ 1.17
NPLOC4-206ENST00000571714 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
NPLOC4-206ENST00000571714 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
NPLOC4-206ENST00000571714 CUX2O14529 1486 aa22.22■■□□□ 1.15
NPLOC4-206ENST00000571714 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
NPLOC4-206ENST00000571714 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
NPLOC4-206ENST00000571714 ERCC6Q03468 1493 aa22.16■■□□□ 1.14
NPLOC4-206ENST00000571714 NESP48681 1621 aa22.07■■□□□ 1.12
NPLOC4-206ENST00000571714 BAZ1AQ9NRL2 1556 aaPredicted RBP22.06■■□□□ 1.12
NPLOC4-206ENST00000571714 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
NPLOC4-206ENST00000571714 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
NPLOC4-206ENST00000571714 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
NPLOC4-206ENST00000571714 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
NPLOC4-206ENST00000571714 LAMC3Q9Y6N6 1575 aa21.86■■□□□ 1.09
NPLOC4-206ENST00000571714 KIF21AQ7Z4S6 1674 aa21.79■■□□□ 1.08
NPLOC4-206ENST00000571714 PDS5BQ9NTI5 1447 aa21.69■■□□□ 1.06
NPLOC4-206ENST00000571714 WIZO95785 1651 aa21.64■■□□□ 1.05
NPLOC4-206ENST00000571714 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
NPLOC4-206ENST00000571714 MRC2Q9UBG0 1479 aa21.56■■□□□ 1.04
NPLOC4-206ENST00000571714 WDR62O43379 1518 aa21.55■■□□□ 1.04
NPLOC4-206ENST00000571714 CEP164Q9UPV0 1460 aa21.44■■□□□ 1.02
NPLOC4-206ENST00000571714 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
NPLOC4-206ENST00000571714 CFTRP13569 1480 aa21.39■■□□□ 1.01
NPLOC4-206ENST00000571714 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
NPLOC4-206ENST00000571714 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
NPLOC4-206ENST00000571714 URB2Q14146 1524 aaKnown RBP21.28■■□□□ 1
NPLOC4-206ENST00000571714 TRIM41Q8WV44 630 aa21.26■□□□□ 0.99
NPLOC4-206ENST00000571714 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
NPLOC4-206ENST00000571714 CCDC88BA6NC98 1476 aa21.09■□□□□ 0.97
NPLOC4-206ENST00000571714 OSCARQ8IYS5 282 aa21.09■□□□□ 0.97
NPLOC4-206ENST00000571714 ZNF608Q9ULD9 1512 aaPredicted RBP21.04■□□□□ 0.96
NPLOC4-206ENST00000571714 IFT140Q96RY7 1462 aa21.01■□□□□ 0.95
NPLOC4-206ENST00000571714 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
NPLOC4-206ENST00000571714 RIMBP3CA6NJZ7 1639 aa20.95■□□□□ 0.94
NPLOC4-206ENST00000571714 RIMBP3BA6NNM3 1639 aa20.95■□□□□ 0.94
NPLOC4-206ENST00000571714 RIMBP3Q9UFD9 1639 aa20.95■□□□□ 0.94
NPLOC4-206ENST00000571714 EIF4G3O43432 1585 aaKnown RBP20.93■□□□□ 0.94
NPLOC4-206ENST00000571714 DNMBPQ6XZF7 1577 aa20.91■□□□□ 0.94
NPLOC4-206ENST00000571714 ABCC8Q09428 1581 aa20.88■□□□□ 0.93
NPLOC4-206ENST00000571714 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
NPLOC4-206ENST00000571714 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
NPLOC4-206ENST00000571714 AQRO60306 1485 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■■■■□ 19.4
NPLOC4-206ENST00000571714 CHD1O14646 1710 aa20.78■□□□□ 0.92
NPLOC4-206ENST00000571714 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
NPLOC4-206ENST00000571714 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
NPLOC4-206ENST00000571714 ARAP1Q96P48 1450 aa20.65■□□□□ 0.9
NPLOC4-206ENST00000571714 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
NPLOC4-206ENST00000571714 SOGA1O94964 1423 aa20.62■□□□□ 0.89
NPLOC4-206ENST00000571714 CYB5RLQ6IPT4 315 aa20.62■□□□□ 0.89
NPLOC4-206ENST00000571714 TDRD9Q8NDG6 1382 aaKnown RBP20.61■□□□□ 0.89
NPLOC4-206ENST00000571714 WDR97A6NE52 1622 aa20.6■□□□□ 0.89
NPLOC4-206ENST00000571714 CUX1P39880 1505 aa20.59■□□□□ 0.89
NPLOC4-206ENST00000571714 SNAPC4Q5SXM2 1469 aa20.59■□□□□ 0.89
NPLOC4-206ENST00000571714 FBLN2P98095 1184 aa20.59■□□□□ 0.89
NPLOC4-206ENST00000571714 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
NPLOC4-206ENST00000571714 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
NPLOC4-206ENST00000571714 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
NPLOC4-206ENST00000571714 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
NPLOC4-206ENST00000571714 SYNJ2O15056 1496 aa20.45■□□□□ 0.86
NPLOC4-206ENST00000571714 PBRM1Q86U86 1689 aa20.44■□□□□ 0.86
NPLOC4-206ENST00000571714 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
NPLOC4-206ENST00000571714 TRHP20396 242 aaPredicted RBP20.4■□□□□ 0.86
NPLOC4-206ENST00000571714 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
NPLOC4-206ENST00000571714 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
NPLOC4-206ENST00000571714 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
NPLOC4-206ENST00000571714 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
NPLOC4-206ENST00000571714 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
NPLOC4-206ENST00000571714 ERCC6L2Q5T890 1561 aa20.24■□□□□ 0.83
NPLOC4-206ENST00000571714 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
NPLOC4-206ENST00000571714 SUPT5HO00267 1087 aaKnown RBP20.22■□□□□ 0.83
NPLOC4-206ENST00000571714 CEP170Q5SW79 1584 aa20.21■□□□□ 0.83
NPLOC4-206ENST00000571714 TOP2BQ02880 1626 aa20.21■□□□□ 0.83
NPLOC4-206ENST00000571714 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
NPLOC4-206ENST00000571714 NUP160Q12769 1436 aa20.19■□□□□ 0.82
NPLOC4-206ENST00000571714 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
NPLOC4-206ENST00000571714 FHAD1B1AJZ9 1412 aa20.12■□□□□ 0.81
NPLOC4-206ENST00000571714 ERICH3Q5RHP9 1530 aa20.11■□□□□ 0.81
NPLOC4-206ENST00000571714 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
NPLOC4-206ENST00000571714 PRG4Q92954 1404 aaPredicted RBP19.97■□□□□ 0.79
NPLOC4-206ENST00000571714 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
NPLOC4-206ENST00000571714 JPH4Q96JJ6 628 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms