RNA–Protein interactions for RNA: ENST00000571584.1

COX11-202, Transcript of cytochrome c oxidase copper chaperone COX11, humanhuman

TSL 2 BASIC

Gene COX11, Length 1,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX11-202ENST00000571584 NISCHQ9Y2I1 1504 aa39.74■■■■□ 3.95
COX11-202ENST00000571584 ABCC9O60706 1549 aa35.88■■■■□ 3.33
COX11-202ENST00000571584 CCDC180Q9P1Z9 1646 aa35.82■■■■□ 3.32
COX11-202ENST00000571584 RB1CC1Q8TDY2 1594 aa34.18■■■■□ 3.06
COX11-202ENST00000571584 NACADO15069 1562 aa33.9■■■■□ 3.02
COX11-202ENST00000571584 DNAJC5BQ9UF47 199 aa33.75■■■□□ 2.99
COX11-202ENST00000571584 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
COX11-202ENST00000571584 MYO15BQ96JP2 1530 aa33.38■■■□□ 2.93
COX11-202ENST00000571584 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
COX11-202ENST00000571584 PABPN1Q86U42 306 aaKnown RBP eCLIP33.35■■■□□ 2.93
COX11-202ENST00000571584 BICRAQ9NZM4 1560 aa33.08■■■□□ 2.89
COX11-202ENST00000571584 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
COX11-202ENST00000571584 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
COX11-202ENST00000571584 SHROOM4Q9ULL8 1493 aa32.75■■■□□ 2.83
COX11-202ENST00000571584 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
COX11-202ENST00000571584 CC2D2AQ9P2K1 1620 aa32.45■■■□□ 2.79
COX11-202ENST00000571584 CECR2Q9BXF3 1484 aa32.38■■■□□ 2.77
COX11-202ENST00000571584 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
COX11-202ENST00000571584 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
COX11-202ENST00000571584 DNAJC5Q9H3Z4 198 aa31.24■■■□□ 2.59
COX11-202ENST00000571584 ATAD2BQ9ULI0 1458 aa31.11■■■□□ 2.57
COX11-202ENST00000571584 CUX2O14529 1486 aa31.09■■■□□ 2.57
COX11-202ENST00000571584 SMARCA2P51531 1590 aa31.08■■■□□ 2.57
COX11-202ENST00000571584 ERCC6Q03468 1493 aa31.07■■■□□ 2.56
COX11-202ENST00000571584 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
COX11-202ENST00000571584 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
COX11-202ENST00000571584 BAZ1AQ9NRL2 1556 aaPredicted RBP30.91■■■□□ 2.54
COX11-202ENST00000571584 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.53
COX11-202ENST00000571584 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
COX11-202ENST00000571584 NESP48681 1621 aa30.74■■■□□ 2.51
COX11-202ENST00000571584 LAMC3Q9Y6N6 1575 aa30.62■■■□□ 2.49
COX11-202ENST00000571584 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
COX11-202ENST00000571584 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
COX11-202ENST00000571584 PDS5BQ9NTI5 1447 aa30.46■■■□□ 2.47
COX11-202ENST00000571584 KIF21AQ7Z4S6 1674 aa30.41■■■□□ 2.46
COX11-202ENST00000571584 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
COX11-202ENST00000571584 WIZO95785 1651 aa30.22■■■□□ 2.43
COX11-202ENST00000571584 MRC2Q9UBG0 1479 aa30.16■■■□□ 2.42
COX11-202ENST00000571584 WDR62O43379 1518 aa30.09■■■□□ 2.41
COX11-202ENST00000571584 CEP164Q9UPV0 1460 aa30.01■■■□□ 2.4
COX11-202ENST00000571584 FANCD2Q9BXW9 1451 aa29.94■■■□□ 2.38
COX11-202ENST00000571584 CFTRP13569 1480 aa29.9■■■□□ 2.38
COX11-202ENST00000571584 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
COX11-202ENST00000571584 TOP2AP11388 1531 aaKnown RBP29.86■■■□□ 2.37
COX11-202ENST00000571584 TRIM41Q8WV44 630 aa29.78■■■□□ 2.36
COX11-202ENST00000571584 PRDM2Q13029 1718 aa29.68■■■□□ 2.34
COX11-202ENST00000571584 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
COX11-202ENST00000571584 OSCARQ8IYS5 282 aa29.65■■■□□ 2.34
COX11-202ENST00000571584 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
COX11-202ENST00000571584 IFT140Q96RY7 1462 aa29.43■■■□□ 2.3
COX11-202ENST00000571584 ABCC8Q09428 1581 aa29.39■■■□□ 2.29
COX11-202ENST00000571584 TOPBP1Q92547 1522 aa29.35■■■□□ 2.29
COX11-202ENST00000571584 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
COX11-202ENST00000571584 DNMBPQ6XZF7 1577 aa29.25■■■□□ 2.27
COX11-202ENST00000571584 RIMBP3CA6NJZ7 1639 aa29.23■■■□□ 2.27
COX11-202ENST00000571584 RIMBP3BA6NNM3 1639 aa29.23■■■□□ 2.27
COX11-202ENST00000571584 RIMBP3Q9UFD9 1639 aa29.23■■■□□ 2.27
COX11-202ENST00000571584 EIF4G3O43432 1585 aaKnown RBP29.19■■■□□ 2.26
COX11-202ENST00000571584 ARHGEF11O15085 1522 aa29.11■■■□□ 2.25
COX11-202ENST00000571584 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
COX11-202ENST00000571584 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.247e-6■■□□□ 13.1
COX11-202ENST00000571584 CHD1O14646 1710 aa29.03■■■□□ 2.24
COX11-202ENST00000571584 POLA1P09884 1462 aaPredicted RBP29.03■■■□□ 2.24
COX11-202ENST00000571584 FBLN2P98095 1184 aa28.95■■■□□ 2.22
COX11-202ENST00000571584 SOGA1O94964 1423 aa28.93■■■□□ 2.22
COX11-202ENST00000571584 CYB5RLQ6IPT4 315 aa28.92■■■□□ 2.22
COX11-202ENST00000571584 WDR97A6NE52 1622 aa28.9■■■□□ 2.22
COX11-202ENST00000571584 RAD54L2Q9Y4B4 1467 aa28.9■■■□□ 2.22
COX11-202ENST00000571584 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
COX11-202ENST00000571584 FGD5Q6ZNL6 1462 aa28.82■■■□□ 2.2
COX11-202ENST00000571584 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
COX11-202ENST00000571584 SNAPC4Q5SXM2 1469 aa28.76■■■□□ 2.19
COX11-202ENST00000571584 CHMP7Q8WUX9 453 aaPredicted RBP28.74■■■□□ 2.19
COX11-202ENST00000571584 CUX1P39880 1505 aa28.74■■■□□ 2.19
COX11-202ENST00000571584 MAGI1Q96QZ7 1491 aaPredicted RBP28.73■■■□□ 2.19
COX11-202ENST00000571584 SYNJ1O43426 1573 aa28.71■■■□□ 2.19
COX11-202ENST00000571584 TRHP20396 242 aaPredicted RBP28.7■■■□□ 2.18
COX11-202ENST00000571584 GRIN2BQ13224 1484 aa28.7■■■□□ 2.18
COX11-202ENST00000571584 CLASP1Q7Z460 1538 aa28.67■■■□□ 2.18
COX11-202ENST00000571584 SYNJ2O15056 1496 aa28.63■■■□□ 2.17
COX11-202ENST00000571584 PBRM1Q86U86 1689 aa28.59■■■□□ 2.17
COX11-202ENST00000571584 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
COX11-202ENST00000571584 ABCA10Q8WWZ4 1543 aa28.51■■■□□ 2.15
COX11-202ENST00000571584 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
COX11-202ENST00000571584 SUPT5HO00267 1087 aaKnown RBP28.44■■■□□ 2.14
COX11-202ENST00000571584 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
COX11-202ENST00000571584 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
COX11-202ENST00000571584 BIVM-ERCC5R4GMW8 1640 aa28.29■■■□□ 2.12
COX11-202ENST00000571584 TOP2BQ02880 1626 aa28.29■■■□□ 2.12
COX11-202ENST00000571584 ADAMTS12P58397 1594 aa28.27■■■□□ 2.12
COX11-202ENST00000571584 NUP160Q12769 1436 aa28.22■■■□□ 2.11
COX11-202ENST00000571584 FHAD1B1AJZ9 1412 aa28.21■■■□□ 2.11
COX11-202ENST00000571584 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
COX11-202ENST00000571584 ERICH3Q5RHP9 1530 aa28.18■■■□□ 2.1
COX11-202ENST00000571584 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
COX11-202ENST00000571584 SHROOM2Q13796 1616 aa28.13■■■□□ 2.09
COX11-202ENST00000571584 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
COX11-202ENST00000571584 PRG4Q92954 1404 aaPredicted RBP27.97■■■□□ 2.07
COX11-202ENST00000571584 JPH4Q96JJ6 628 aa27.96■■■□□ 2.07
COX11-202ENST00000571584 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms