RNA–Protein interactions for RNA: ENST00000571383.5

ABR-212, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-212ENST00000571383 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
ABR-212ENST00000571383 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
ABR-212ENST00000571383 ABCC9O60706 1549 aa26.85■■□□□ 1.89
ABR-212ENST00000571383 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
ABR-212ENST00000571383 NACADO15069 1562 aa25.72■■□□□ 1.71
ABR-212ENST00000571383 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
ABR-212ENST00000571383 MYO15BQ96JP2 1530 aa25.49■■□□□ 1.67
ABR-212ENST00000571383 ZCCHC6Q5VYS8 1495 aaKnown RBP25.49■■□□□ 1.67
ABR-212ENST00000571383 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
ABR-212ENST00000571383 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.65
ABR-212ENST00000571383 BICRAQ9NZM4 1560 aa25.06■■□□□ 1.6
ABR-212ENST00000571383 PABPN1Q86U42 306 aaKnown RBP eCLIP24.98■■□□□ 1.59
ABR-212ENST00000571383 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
ABR-212ENST00000571383 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
ABR-212ENST00000571383 SHROOM4Q9ULL8 1493 aa24.71■■□□□ 1.55
ABR-212ENST00000571383 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
ABR-212ENST00000571383 CC2D2AQ9P2K1 1620 aa24.35■■□□□ 1.49
ABR-212ENST00000571383 CECR2Q9BXF3 1484 aa24.13■■□□□ 1.45
ABR-212ENST00000571383 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
ABR-212ENST00000571383 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
ABR-212ENST00000571383 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
ABR-212ENST00000571383 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
ABR-212ENST00000571383 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
ABR-212ENST00000571383 HMGXB3Q12766 1538 aa23.62■■□□□ 1.37
ABR-212ENST00000571383 MROH2BQ7Z745 1585 aa23.61■■□□□ 1.37
ABR-212ENST00000571383 PEG3Q9GZU2 1588 aa23.61■■□□□ 1.37
ABR-212ENST00000571383 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
ABR-212ENST00000571383 WIZO95785 1651 aa23.41■■□□□ 1.34
ABR-212ENST00000571383 RSF1Q96T23 1441 aaPredicted RBP23.22■■□□□ 1.31
ABR-212ENST00000571383 NESP48681 1621 aa23.2■■□□□ 1.3
ABR-212ENST00000571383 LAMC3Q9Y6N6 1575 aa23.15■■□□□ 1.3
ABR-212ENST00000571383 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
ABR-212ENST00000571383 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
ABR-212ENST00000571383 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
ABR-212ENST00000571383 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
ABR-212ENST00000571383 CUX2O14529 1486 aa22.97■■□□□ 1.27
ABR-212ENST00000571383 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
ABR-212ENST00000571383 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
ABR-212ENST00000571383 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
ABR-212ENST00000571383 CFTRP13569 1480 aa22.82■■□□□ 1.24
ABR-212ENST00000571383 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
ABR-212ENST00000571383 FANCD2Q9BXW9 1451 aa22.73■■□□□ 1.23
ABR-212ENST00000571383 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
ABR-212ENST00000571383 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
ABR-212ENST00000571383 WDR62O43379 1518 aa22.71■■□□□ 1.23
ABR-212ENST00000571383 URB2Q14146 1524 aaKnown RBP22.54■■□□□ 1.2
ABR-212ENST00000571383 SUPT5HO00267 1087 aaKnown RBP22.45■■□□□ 1.18
ABR-212ENST00000571383 TOPBP1Q92547 1522 aa22.38■■□□□ 1.17
ABR-212ENST00000571383 DNMBPQ6XZF7 1577 aa22.37■■□□□ 1.17
ABR-212ENST00000571383 DNAJC5Q9H3Z4 198 aa22.36■■□□□ 1.17
ABR-212ENST00000571383 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
ABR-212ENST00000571383 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
ABR-212ENST00000571383 TARBP1Q13395 1621 aaKnown RBP22.21■■□□□ 1.15
ABR-212ENST00000571383 ZNF608Q9ULD9 1512 aaPredicted RBP22.18■■□□□ 1.14
ABR-212ENST00000571383 EIF4G3O43432 1585 aaKnown RBP22.17■■□□□ 1.14
ABR-212ENST00000571383 POLA1P09884 1462 aaPredicted RBP22.17■■□□□ 1.14
ABR-212ENST00000571383 CUX1P39880 1505 aa22.16■■□□□ 1.14
ABR-212ENST00000571383 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
ABR-212ENST00000571383 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
ABR-212ENST00000571383 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
ABR-212ENST00000571383 SOGA1O94964 1423 aa22.02■■□□□ 1.12
ABR-212ENST00000571383 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
ABR-212ENST00000571383 AQRO60306 1485 aaKnown RBP eCLIP22■■□□□ 1.11
ABR-212ENST00000571383 CHD1O14646 1710 aa22■■□□□ 1.11
ABR-212ENST00000571383 SYNJ1O43426 1573 aa21.95■■□□□ 1.11
ABR-212ENST00000571383 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
ABR-212ENST00000571383 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
ABR-212ENST00000571383 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
ABR-212ENST00000571383 TDRD9Q8NDG6 1382 aaKnown RBP21.9■■□□□ 1.1
ABR-212ENST00000571383 OSCARQ8IYS5 282 aa21.89■■□□□ 1.09
ABR-212ENST00000571383 ABCA5Q8WWZ7 1642 aa21.88■■□□□ 1.09
ABR-212ENST00000571383 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
ABR-212ENST00000571383 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
ABR-212ENST00000571383 GRIN2BQ13224 1484 aa21.81■■□□□ 1.08
ABR-212ENST00000571383 GAPVD1Q14C86 1478 aa21.8■■□□□ 1.08
ABR-212ENST00000571383 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
ABR-212ENST00000571383 RIMBP3CA6NJZ7 1639 aa21.73■■□□□ 1.07
ABR-212ENST00000571383 RIMBP3BA6NNM3 1639 aa21.73■■□□□ 1.07
ABR-212ENST00000571383 RIMBP3Q9UFD9 1639 aa21.73■■□□□ 1.07
ABR-212ENST00000571383 FBLN2P98095 1184 aa21.7■■□□□ 1.06
ABR-212ENST00000571383 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
ABR-212ENST00000571383 ADAMTS12P58397 1594 aa21.66■■□□□ 1.06
ABR-212ENST00000571383 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
ABR-212ENST00000571383 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
ABR-212ENST00000571383 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
ABR-212ENST00000571383 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
ABR-212ENST00000571383 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
ABR-212ENST00000571383 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
ABR-212ENST00000571383 FHAD1B1AJZ9 1412 aa21.52■■□□□ 1.04
ABR-212ENST00000571383 CEP170Q5SW79 1584 aa21.51■■□□□ 1.03
ABR-212ENST00000571383 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
ABR-212ENST00000571383 CUL7Q14999 1698 aa21.46■■□□□ 1.03
ABR-212ENST00000571383 NUP160Q12769 1436 aa21.46■■□□□ 1.03
ABR-212ENST00000571383 KIF27Q86VH2 1401 aa21.45■■□□□ 1.02
ABR-212ENST00000571383 SHROOM2Q13796 1616 aa21.4■■□□□ 1.02
ABR-212ENST00000571383 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
ABR-212ENST00000571383 CYB5RLQ6IPT4 315 aa21.36■■□□□ 1.01
ABR-212ENST00000571383 IGF1RP08069 1367 aa21.35■■□□□ 1.01
ABR-212ENST00000571383 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
ABR-212ENST00000571383 CARMIL1Q5VZK9 1371 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms