RNA–Protein interactions for RNA: ENST00000571244.2

MMP12-201, Transcript of matrix metallopeptidase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP12, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP12-201ENST00000571244 AEBP2Q6ZN18 517 aaPredicted RBP17.4■□□□□ 0.38
MMP12-201ENST00000571244 CHIC1Q5VXU3 224 aa16.6■□□□□ 0.25
MMP12-201ENST00000571244 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
MMP12-201ENST00000571244 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
MMP12-201ENST00000571244 POTEDQ86YR6 584 aa14.42□□□□□ -0.1
MMP12-201ENST00000571244 FOXD1Q16676 465 aa13.89□□□□□ -0.19
MMP12-201ENST00000571244 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
MMP12-201ENST00000571244 MSH5O43196 834 aa13.14□□□□□ -0.31
MMP12-201ENST00000571244 PIAS4Q8N2W9 510 aaPredicted RBP13.02□□□□□ -0.32
MMP12-201ENST00000571244 ADRA2BP18089 450 aa12.9□□□□□ -0.34
MMP12-201ENST00000571244 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
MMP12-201ENST00000571244 NISCHQ9Y2I1 1504 aa12.14□□□□□ -0.47
MMP12-201ENST00000571244 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
MMP12-201ENST00000571244 DMRT2Q9Y5R5 561 aa11.86□□□□□ -0.51
MMP12-201ENST00000571244 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
MMP12-201ENST00000571244 PPP4R3CPQ6ZMV5 832 aa11.61□□□□□ -0.55
MMP12-201ENST00000571244 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
MMP12-201ENST00000571244 DCAF8L1A6NGE4 600 aa11.4□□□□□ -0.58
MMP12-201ENST00000571244 HOXD11P31277 338 aaPredicted RBP11.4□□□□□ -0.58
MMP12-201ENST00000571244 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
MMP12-201ENST00000571244 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.6
MMP12-201ENST00000571244 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.6
MMP12-201ENST00000571244 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
MMP12-201ENST00000571244 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
MMP12-201ENST00000571244 C1QBPQ07021 282 aaKnown RBP11.04□□□□□ -0.64
MMP12-201ENST00000571244 KCNA4P22459 653 aa10.98□□□□□ -0.65
MMP12-201ENST00000571244 POTEHQ6S545 545 aa10.98□□□□□ -0.65
MMP12-201ENST00000571244 NPM3O75607 178 aaKnown RBP10.96□□□□□ -0.65
MMP12-201ENST00000571244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
MMP12-201ENST00000571244 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
MMP12-201ENST00000571244 APLP2Q06481 763 aa10.52□□□□□ -0.73
MMP12-201ENST00000571244 CAPN15O75808 1086 aa10.51□□□□□ -0.73
MMP12-201ENST00000571244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.45□□□□□ -0.74
MMP12-201ENST00000571244 HNRNPUL2Q1KMD3 747 aaKnown RBP10.45□□□□□ -0.74
MMP12-201ENST00000571244 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
MMP12-201ENST00000571244 SPINK5Q9NQ38 1064 aaPredicted RBP10.42□□□□□ -0.74
MMP12-201ENST00000571244 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
MMP12-201ENST00000571244 CCDC180Q9P1Z9 1646 aa10.4□□□□□ -0.74
MMP12-201ENST00000571244 DSG3P32926 999 aa10.4□□□□□ -0.75
MMP12-201ENST00000571244 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
MMP12-201ENST00000571244 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
MMP12-201ENST00000571244 ZCCHC6Q5VYS8 1495 aaKnown RBP10.33□□□□□ -0.76
MMP12-201ENST00000571244 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
MMP12-201ENST00000571244 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
MMP12-201ENST00000571244 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
MMP12-201ENST00000571244 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
MMP12-201ENST00000571244 ABCB7O75027 752 aa10.19□□□□□ -0.78
MMP12-201ENST00000571244 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
MMP12-201ENST00000571244 ZBTB22O15209 634 aa10.17□□□□□ -0.78
MMP12-201ENST00000571244 SUPT5HO00267 1087 aaKnown RBP10.1□□□□□ -0.79
MMP12-201ENST00000571244 FOXD4L1Q9NU39 408 aa10.08□□□□□ -0.8
MMP12-201ENST00000571244 RBM42Q9BTD8 480 aaKnown RBP10.05□□□□□ -0.8
MMP12-201ENST00000571244 ABCC9O60706 1549 aa10.04□□□□□ -0.8
MMP12-201ENST00000571244 MYO15BQ96JP2 1530 aa10.03□□□□□ -0.8
MMP12-201ENST00000571244 POLA2Q14181 598 aa10.02□□□□□ -0.81
MMP12-201ENST00000571244 DCAF1Q9Y4B6 1507 aa10.01□□□□□ -0.81
MMP12-201ENST00000571244 ZBTB12Q9Y330 459 aaPredicted RBP9.93□□□□□ -0.82
MMP12-201ENST00000571244 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
MMP12-201ENST00000571244 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
MMP12-201ENST00000571244 ATXN8OSP0DMR3 200 aa9.82□□□□□ -0.84
MMP12-201ENST00000571244 HRCP23327 699 aa9.82□□□□□ -0.84
MMP12-201ENST00000571244 DCAF8L2P0C7V8 631 aa9.81□□□□□ -0.84
MMP12-201ENST00000571244 AKT1S1Q96B36 256 aa9.77□□□□□ -0.85
MMP12-201ENST00000571244 CHRDL2Q6WN34 429 aa9.75□□□□□ -0.85
MMP12-201ENST00000571244 RB1CC1Q8TDY2 1594 aa9.73□□□□□ -0.85
MMP12-201ENST00000571244 NACADO15069 1562 aa9.72□□□□□ -0.85
MMP12-201ENST00000571244 SCRIBQ14160 1630 aa9.68□□□□□ -0.86
MMP12-201ENST00000571244 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
MMP12-201ENST00000571244 PCGF6Q9BYE7 350 aa9.67□□□□□ -0.86
MMP12-201ENST00000571244 FBLN2P98095 1184 aa9.66□□□□□ -0.86
MMP12-201ENST00000571244 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
MMP12-201ENST00000571244 RSF1Q96T23 1441 aaPredicted RBP9.61□□□□□ -0.87
MMP12-201ENST00000571244 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
MMP12-201ENST00000571244 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
MMP12-201ENST00000571244 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
MMP12-201ENST00000571244 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
MMP12-201ENST00000571244 PPARGC1BQ86YN6 1023 aaKnown RBP9.56□□□□□ -0.88
MMP12-201ENST00000571244 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
MMP12-201ENST00000571244 PITPNM1O00562 1244 aa9.49□□□□□ -0.89
MMP12-201ENST00000571244 PIP4P2Q8N4L2 257 aa9.49□□□□□ -0.89
MMP12-201ENST00000571244 SP7Q8TDD2 431 aaPredicted RBP9.48□□□□□ -0.89
MMP12-201ENST00000571244 UNC13AQ9UPW8 1703 aa9.47□□□□□ -0.89
MMP12-201ENST00000571244 EIF4G1Q04637 1599 aaKnown RBP9.45□□□□□ -0.9
MMP12-201ENST00000571244 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
MMP12-201ENST00000571244 MROH2BQ7Z745 1585 aa9.44□□□□□ -0.9
MMP12-201ENST00000571244 WIZO95785 1651 aa9.44□□□□□ -0.9
MMP12-201ENST00000571244 BAZ1AQ9NRL2 1556 aaPredicted RBP9.44□□□□□ -0.9
MMP12-201ENST00000571244 ZNF692Q9BU19 519 aaPredicted RBP9.43□□□□□ -0.9
MMP12-201ENST00000571244 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
MMP12-201ENST00000571244 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
MMP12-201ENST00000571244 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
MMP12-201ENST00000571244 MKRN4PQ13434 485 aaPredicted RBP9.4□□□□□ -0.9
MMP12-201ENST00000571244 DNAJC5Q9H3Z4 198 aa9.4□□□□□ -0.91
MMP12-201ENST00000571244 BICRAQ9NZM4 1560 aa9.38□□□□□ -0.91
MMP12-201ENST00000571244 HAX1O00165 279 aa9.38□□□□□ -0.91
MMP12-201ENST00000571244 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
MMP12-201ENST00000571244 ZEB1P37275 1124 aaPredicted RBP9.36□□□□□ -0.91
MMP12-201ENST00000571244 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
MMP12-201ENST00000571244 PABPN1Q86U42 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
MMP12-201ENST00000571244 FAM9AQ8IZU1 332 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms