RNA–Protein interactions for RNA: ENST00000570981.1

LCMT1-205, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 2

Gene LCMT1, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-205ENST00000570981 NISCHQ9Y2I1 1504 aa24.68■■□□□ 1.54
LCMT1-205ENST00000570981 ABCC9O60706 1549 aa22.43■■□□□ 1.18
LCMT1-205ENST00000570981 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
LCMT1-205ENST00000570981 DNAJC5BQ9UF47 199 aa21.42■■□□□ 1.02
LCMT1-205ENST00000570981 RB1CC1Q8TDY2 1594 aa21.23■□□□□ 0.99
LCMT1-205ENST00000570981 NACADO15069 1562 aa21.06■□□□□ 0.96
LCMT1-205ENST00000570981 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
LCMT1-205ENST00000570981 PABPN1Q86U42 306 aaKnown RBP eCLIP20.89■□□□□ 0.93
LCMT1-205ENST00000570981 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
LCMT1-205ENST00000570981 MYO15BQ96JP2 1530 aa20.73■□□□□ 0.91
LCMT1-205ENST00000570981 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
LCMT1-205ENST00000570981 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
LCMT1-205ENST00000570981 ZCCHC6Q5VYS8 1495 aaKnown RBP20.37■□□□□ 0.85
LCMT1-205ENST00000570981 SHROOM4Q9ULL8 1493 aa20.32■□□□□ 0.84
LCMT1-205ENST00000570981 CC2D2AQ9P2K1 1620 aa20.26■□□□□ 0.83
LCMT1-205ENST00000570981 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
LCMT1-205ENST00000570981 EIF4G1Q04637 1599 aaKnown RBP20.16■□□□□ 0.82
LCMT1-205ENST00000570981 SCRIBQ14160 1630 aa20.16■□□□□ 0.82
LCMT1-205ENST00000570981 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
LCMT1-205ENST00000570981 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
LCMT1-205ENST00000570981 NCAPD3P42695 1498 aa19.51■□□□□ 0.71
LCMT1-205ENST00000570981 CUX2O14529 1486 aa19.42■□□□□ 0.7
LCMT1-205ENST00000570981 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
LCMT1-205ENST00000570981 ERCC6Q03468 1493 aa19.31■□□□□ 0.68
LCMT1-205ENST00000570981 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
LCMT1-205ENST00000570981 SMARCA4P51532 1647 aa19.26■□□□□ 0.67
LCMT1-205ENST00000570981 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
LCMT1-205ENST00000570981 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
LCMT1-205ENST00000570981 NESP48681 1621 aa19.24■□□□□ 0.67
LCMT1-205ENST00000570981 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
LCMT1-205ENST00000570981 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
LCMT1-205ENST00000570981 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
LCMT1-205ENST00000570981 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
LCMT1-205ENST00000570981 LAMC3Q9Y6N6 1575 aa19.03■□□□□ 0.64
LCMT1-205ENST00000570981 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.63
LCMT1-205ENST00000570981 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
LCMT1-205ENST00000570981 PDS5BQ9NTI5 1447 aa18.93■□□□□ 0.62
LCMT1-205ENST00000570981 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
LCMT1-205ENST00000570981 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
LCMT1-205ENST00000570981 WIZO95785 1651 aa18.75■□□□□ 0.59
LCMT1-205ENST00000570981 WDR62O43379 1518 aa18.74■□□□□ 0.59
LCMT1-205ENST00000570981 TRIM41Q8WV44 630 aa18.71■□□□□ 0.59
LCMT1-205ENST00000570981 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
LCMT1-205ENST00000570981 CFTRP13569 1480 aa18.61■□□□□ 0.57
LCMT1-205ENST00000570981 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
LCMT1-205ENST00000570981 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
LCMT1-205ENST00000570981 RSF1Q96T23 1441 aaPredicted RBP18.55■□□□□ 0.56
LCMT1-205ENST00000570981 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
LCMT1-205ENST00000570981 TOP2AP11388 1531 aaKnown RBP18.46■□□□□ 0.55
LCMT1-205ENST00000570981 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.52
LCMT1-205ENST00000570981 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
LCMT1-205ENST00000570981 ZNF608Q9ULD9 1512 aaPredicted RBP18.32■□□□□ 0.52
LCMT1-205ENST00000570981 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
LCMT1-205ENST00000570981 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
LCMT1-205ENST00000570981 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
LCMT1-205ENST00000570981 IFT140Q96RY7 1462 aa18.28■□□□□ 0.52
LCMT1-205ENST00000570981 TOPBP1Q92547 1522 aa18.25■□□□□ 0.51
LCMT1-205ENST00000570981 ARHGEF11O15085 1522 aa18.2■□□□□ 0.5
LCMT1-205ENST00000570981 ABCC8Q09428 1581 aa18.19■□□□□ 0.5
LCMT1-205ENST00000570981 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
LCMT1-205ENST00000570981 AQRO60306 1485 aaKnown RBP eCLIP18.14■□□□□ 0.49
LCMT1-205ENST00000570981 EIF4G3O43432 1585 aaKnown RBP18.13■□□□□ 0.49
LCMT1-205ENST00000570981 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
LCMT1-205ENST00000570981 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
LCMT1-205ENST00000570981 CHD1O14646 1710 aa18.06■□□□□ 0.48
LCMT1-205ENST00000570981 POLA1P09884 1462 aaPredicted RBP18.05■□□□□ 0.48
LCMT1-205ENST00000570981 ARAP1Q96P48 1450 aa18.02■□□□□ 0.48
LCMT1-205ENST00000570981 FBLN2P98095 1184 aa18.01■□□□□ 0.47
LCMT1-205ENST00000570981 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
LCMT1-205ENST00000570981 TDRD9Q8NDG6 1382 aaKnown RBP17.99■□□□□ 0.47
LCMT1-205ENST00000570981 SOGA1O94964 1423 aa17.98■□□□□ 0.47
LCMT1-205ENST00000570981 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
LCMT1-205ENST00000570981 CLASP1Q7Z460 1538 aa17.88■□□□□ 0.45
LCMT1-205ENST00000570981 FGD5Q6ZNL6 1462 aa17.88■□□□□ 0.45
LCMT1-205ENST00000570981 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
LCMT1-205ENST00000570981 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
LCMT1-205ENST00000570981 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
LCMT1-205ENST00000570981 CUX1P39880 1505 aa17.86■□□□□ 0.45
LCMT1-205ENST00000570981 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
LCMT1-205ENST00000570981 GRIN2BQ13224 1484 aa17.82■□□□□ 0.44
LCMT1-205ENST00000570981 SYNJ1O43426 1573 aa17.79■□□□□ 0.44
LCMT1-205ENST00000570981 SYNJ2O15056 1496 aa17.79■□□□□ 0.44
LCMT1-205ENST00000570981 GAPVD1Q14C86 1478 aa17.74■□□□□ 0.43
LCMT1-205ENST00000570981 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
LCMT1-205ENST00000570981 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
LCMT1-205ENST00000570981 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
LCMT1-205ENST00000570981 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
LCMT1-205ENST00000570981 GRIN2AQ12879 1464 aa17.59■□□□□ 0.41
LCMT1-205ENST00000570981 NUP160Q12769 1436 aa17.57■□□□□ 0.4
LCMT1-205ENST00000570981 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
LCMT1-205ENST00000570981 CEP170Q5SW79 1584 aa17.54■□□□□ 0.4
LCMT1-205ENST00000570981 SHROOM2Q13796 1616 aa17.51■□□□□ 0.39
LCMT1-205ENST00000570981 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
LCMT1-205ENST00000570981 FHAD1B1AJZ9 1412 aa17.5■□□□□ 0.39
LCMT1-205ENST00000570981 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
LCMT1-205ENST00000570981 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
LCMT1-205ENST00000570981 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
LCMT1-205ENST00000570981 ERICH3Q5RHP9 1530 aa17.45■□□□□ 0.38
LCMT1-205ENST00000570981 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
LCMT1-205ENST00000570981 KIF13AQ9H1H9 1805 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms