RNA–Protein interactions for RNA: ENST00000570569.1

TMEM256-PLSCR3-201, Transcript of TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3

Gene TMEM256-PLSCR3, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3-201ENST00000570569 NISCHQ9Y2I1 1504 aa41.74■■■■■ 4.27
TMEM256-PLSCR3-201ENST00000570569 CCDC180Q9P1Z9 1646 aa37.22■■■■□ 3.55
TMEM256-PLSCR3-201ENST00000570569 ABCC9O60706 1549 aa36.84■■■■□ 3.49
TMEM256-PLSCR3-201ENST00000570569 RB1CC1Q8TDY2 1594 aa35.26■■■■□ 3.24
TMEM256-PLSCR3-201ENST00000570569 DCAF8L2P0C7V8 631 aa35.18■■■■□ 3.22
TMEM256-PLSCR3-201ENST00000570569 NACADO15069 1562 aa35.13■■■■□ 3.21
TMEM256-PLSCR3-201ENST00000570569 MYO15BQ96JP2 1530 aa34.78■■■■□ 3.16
TMEM256-PLSCR3-201ENST00000570569 ZCCHC6Q5VYS8 1495 aaKnown RBP34.66■■■■□ 3.14
TMEM256-PLSCR3-201ENST00000570569 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
TMEM256-PLSCR3-201ENST00000570569 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
TMEM256-PLSCR3-201ENST00000570569 UNC13AQ9UPW8 1703 aa34.38■■■■□ 3.09
TMEM256-PLSCR3-201ENST00000570569 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
TMEM256-PLSCR3-201ENST00000570569 DNAJC5BQ9UF47 199 aa34.15■■■■□ 3.06
TMEM256-PLSCR3-201ENST00000570569 SCRIBQ14160 1630 aa33.97■■■■□ 3.03
TMEM256-PLSCR3-201ENST00000570569 SHROOM4Q9ULL8 1493 aa33.79■■■■□ 3
TMEM256-PLSCR3-201ENST00000570569 EIF4G1Q04637 1599 aaKnown RBP33.31■■■□□ 2.92
TMEM256-PLSCR3-201ENST00000570569 CC2D2AQ9P2K1 1620 aa33.27■■■□□ 2.92
TMEM256-PLSCR3-201ENST00000570569 CECR2Q9BXF3 1484 aa33.14■■■□□ 2.9
TMEM256-PLSCR3-201ENST00000570569 SMARCA4P51532 1647 aa32.44■■■□□ 2.78
TMEM256-PLSCR3-201ENST00000570569 NCAPD3P42695 1498 aa32.43■■■□□ 2.78
TMEM256-PLSCR3-201ENST00000570569 ATAD2BQ9ULI0 1458 aa32.39■■■□□ 2.78
TMEM256-PLSCR3-201ENST00000570569 BAZ1AQ9NRL2 1556 aaPredicted RBP32.39■■■□□ 2.78
TMEM256-PLSCR3-201ENST00000570569 SMARCA2P51531 1590 aa32.33■■■□□ 2.77
TMEM256-PLSCR3-201ENST00000570569 HMGXB3Q12766 1538 aa32.2■■■□□ 2.74
TMEM256-PLSCR3-201ENST00000570569 MROH2BQ7Z745 1585 aa32.16■■■□□ 2.74
TMEM256-PLSCR3-201ENST00000570569 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
TMEM256-PLSCR3-201ENST00000570569 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
TMEM256-PLSCR3-201ENST00000570569 ERCC6Q03468 1493 aa31.8■■■□□ 2.68
TMEM256-PLSCR3-201ENST00000570569 WIZO95785 1651 aa31.79■■■□□ 2.68
TMEM256-PLSCR3-201ENST00000570569 NESP48681 1621 aa31.75■■■□□ 2.67
TMEM256-PLSCR3-201ENST00000570569 RSF1Q96T23 1441 aaPredicted RBP31.69■■■□□ 2.66
TMEM256-PLSCR3-201ENST00000570569 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
TMEM256-PLSCR3-201ENST00000570569 CUX2O14529 1486 aa31.55■■■□□ 2.64
TMEM256-PLSCR3-201ENST00000570569 CADPSQ9ULU8 1353 aa31.5■■■□□ 2.63
TMEM256-PLSCR3-201ENST00000570569 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
TMEM256-PLSCR3-201ENST00000570569 TOP2AP11388 1531 aaKnown RBP31.43■■■□□ 2.62
TMEM256-PLSCR3-201ENST00000570569 KIF21AQ7Z4S6 1674 aa31.33■■■□□ 2.61
TMEM256-PLSCR3-201ENST00000570569 THOC2Q8NI27 1593 aaKnown RBP31.29■■■□□ 2.6
TMEM256-PLSCR3-201ENST00000570569 CFTRP13569 1480 aa31.2■■■□□ 2.58
TMEM256-PLSCR3-201ENST00000570569 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
TMEM256-PLSCR3-201ENST00000570569 FANCD2Q9BXW9 1451 aa31.11■■■□□ 2.57
TMEM256-PLSCR3-201ENST00000570569 CEP164Q9UPV0 1460 aa31.1■■■□□ 2.57
TMEM256-PLSCR3-201ENST00000570569 CCDC88BA6NC98 1476 aa31.09■■■□□ 2.57
TMEM256-PLSCR3-201ENST00000570569 DNAJC5Q9H3Z4 198 aa31.07■■■□□ 2.56
TMEM256-PLSCR3-201ENST00000570569 WDR62O43379 1518 aa31■■■□□ 2.55
TMEM256-PLSCR3-201ENST00000570569 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
TMEM256-PLSCR3-201ENST00000570569 URB2Q14146 1524 aaKnown RBP30.8■■■□□ 2.52
TMEM256-PLSCR3-201ENST00000570569 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
TMEM256-PLSCR3-201ENST00000570569 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
TMEM256-PLSCR3-201ENST00000570569 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
TMEM256-PLSCR3-201ENST00000570569 DNMBPQ6XZF7 1577 aa30.49■■■□□ 2.47
TMEM256-PLSCR3-201ENST00000570569 IFT140Q96RY7 1462 aa30.48■■■□□ 2.47
TMEM256-PLSCR3-201ENST00000570569 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
TMEM256-PLSCR3-201ENST00000570569 OSCARQ8IYS5 282 aa30.28■■■□□ 2.44
TMEM256-PLSCR3-201ENST00000570569 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
TMEM256-PLSCR3-201ENST00000570569 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
TMEM256-PLSCR3-201ENST00000570569 SOGA1O94964 1423 aa30.2■■■□□ 2.42
TMEM256-PLSCR3-201ENST00000570569 CUX1P39880 1505 aa30.18■■■□□ 2.42
TMEM256-PLSCR3-201ENST00000570569 EIF4G3O43432 1585 aaKnown RBP30.18■■■□□ 2.42
TMEM256-PLSCR3-201ENST00000570569 AQRO60306 1485 aaKnown RBP eCLIP30.17■■■□□ 2.425e-14■■■■■ 78.5
TMEM256-PLSCR3-201ENST00000570569 RAD54L2Q9Y4B4 1467 aa30.17■■■□□ 2.42
TMEM256-PLSCR3-201ENST00000570569 FGD5Q6ZNL6 1462 aa30.16■■■□□ 2.42
TMEM256-PLSCR3-201ENST00000570569 TDRD9Q8NDG6 1382 aaKnown RBP30.08■■■□□ 2.41
TMEM256-PLSCR3-201ENST00000570569 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
TMEM256-PLSCR3-201ENST00000570569 FBLN2P98095 1184 aa29.96■■■□□ 2.39
TMEM256-PLSCR3-201ENST00000570569 TRIM41Q8WV44 630 aa29.92■■■□□ 2.38
TMEM256-PLSCR3-201ENST00000570569 WRNQ14191 1432 aaPredicted RBP eCLIP29.9■■■□□ 2.38
TMEM256-PLSCR3-201ENST00000570569 CHD1O14646 1710 aa29.87■■■□□ 2.37
TMEM256-PLSCR3-201ENST00000570569 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
TMEM256-PLSCR3-201ENST00000570569 SNAPC4Q5SXM2 1469 aa29.85■■■□□ 2.37
TMEM256-PLSCR3-201ENST00000570569 ABCA10Q8WWZ4 1543 aa29.84■■■□□ 2.37
TMEM256-PLSCR3-201ENST00000570569 TOP2BQ02880 1626 aa29.83■■■□□ 2.37
TMEM256-PLSCR3-201ENST00000570569 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
TMEM256-PLSCR3-201ENST00000570569 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
TMEM256-PLSCR3-201ENST00000570569 BIVM-ERCC5R4GMW8 1640 aa29.81■■■□□ 2.36
TMEM256-PLSCR3-201ENST00000570569 MAGI1Q96QZ7 1491 aaPredicted RBP29.8■■■□□ 2.36
TMEM256-PLSCR3-201ENST00000570569 SYNJ1O43426 1573 aa29.8■■■□□ 2.36
TMEM256-PLSCR3-201ENST00000570569 RIMBP3CA6NJZ7 1639 aa29.72■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 RIMBP3BA6NNM3 1639 aa29.72■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 RIMBP3Q9UFD9 1639 aa29.72■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 ABCA5Q8WWZ7 1642 aa29.71■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 PBRM1Q86U86 1689 aa29.71■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 SYNJ2O15056 1496 aa29.7■■■□□ 2.35
TMEM256-PLSCR3-201ENST00000570569 ARHGEF11O15085 1522 aa29.69■■■□□ 2.34
TMEM256-PLSCR3-201ENST00000570569 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
TMEM256-PLSCR3-201ENST00000570569 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
TMEM256-PLSCR3-201ENST00000570569 ERICH3Q5RHP9 1530 aa29.48■■■□□ 2.31
TMEM256-PLSCR3-201ENST00000570569 FHAD1B1AJZ9 1412 aa29.47■■■□□ 2.31
TMEM256-PLSCR3-201ENST00000570569 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
TMEM256-PLSCR3-201ENST00000570569 GRIN2AQ12879 1464 aa29.46■■■□□ 2.31
TMEM256-PLSCR3-201ENST00000570569 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
TMEM256-PLSCR3-201ENST00000570569 NUP160Q12769 1436 aa29.34■■■□□ 2.29
TMEM256-PLSCR3-201ENST00000570569 KIF27Q86VH2 1401 aa29.33■■■□□ 2.29
TMEM256-PLSCR3-201ENST00000570569 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
TMEM256-PLSCR3-201ENST00000570569 IGF1RP08069 1367 aa29.26■■■□□ 2.27
TMEM256-PLSCR3-201ENST00000570569 CUL7Q14999 1698 aa29.13■■■□□ 2.25
TMEM256-PLSCR3-201ENST00000570569 JPH4Q96JJ6 628 aa29.12■■■□□ 2.25
TMEM256-PLSCR3-201ENST00000570569 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
TMEM256-PLSCR3-201ENST00000570569 ERCC6L2Q5T890 1561 aa29.11■■■□□ 2.25
TMEM256-PLSCR3-201ENST00000570569 TRHP20396 242 aaPredicted RBP29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms