RNA–Protein interactions for RNA: ENST00000570251.1

TIPIN-206, Transcript of TIMELESS interacting protein, humanhuman

TSL 3

Gene TIPIN, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-206ENST00000570251 NISCHQ9Y2I1 1504 aa48.97■■■■■ 5.43
TIPIN-206ENST00000570251 ABCC9O60706 1549 aa44.62■■■■■ 4.73
TIPIN-206ENST00000570251 CCDC180Q9P1Z9 1646 aa44.21■■■■■ 4.67
TIPIN-206ENST00000570251 RB1CC1Q8TDY2 1594 aa42.32■■■■■ 4.37
TIPIN-206ENST00000570251 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
TIPIN-206ENST00000570251 NACADO15069 1562 aa41.92■■■■■ 4.3
TIPIN-206ENST00000570251 DCAF8L2P0C7V8 631 aa41.44■■■■■ 4.22
TIPIN-206ENST00000570251 PABPN1Q86U42 306 aaKnown RBP eCLIP41.41■■■■■ 4.22
TIPIN-206ENST00000570251 UNC13AQ9UPW8 1703 aa41.24■■■■■ 4.19
TIPIN-206ENST00000570251 MYO15BQ96JP2 1530 aa41.22■■■■■ 4.19
TIPIN-206ENST00000570251 BICRAQ9NZM4 1560 aa41.04■■■■■ 4.16
TIPIN-206ENST00000570251 SHROOM4Q9ULL8 1493 aa40.6■■■■■ 4.09
TIPIN-206ENST00000570251 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.07
TIPIN-206ENST00000570251 DCAF1Q9Y4B6 1507 aa40.48■■■■■ 4.07
TIPIN-206ENST00000570251 CC2D2AQ9P2K1 1620 aa40.3■■■■■ 4.04
TIPIN-206ENST00000570251 CECR2Q9BXF3 1484 aa40.29■■■■■ 4.04
TIPIN-206ENST00000570251 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
TIPIN-206ENST00000570251 EIF4G1Q04637 1599 aaKnown RBP40.11■■■■■ 4.01
TIPIN-206ENST00000570251 DNAJC5Q9H3Z4 198 aa39.22■■■■□ 3.87
TIPIN-206ENST00000570251 CUX2O14529 1486 aa38.76■■■■□ 3.8
TIPIN-206ENST00000570251 NCAPD3P42695 1498 aa38.68■■■■□ 3.78
TIPIN-206ENST00000570251 ERCC6Q03468 1493 aa38.63■■■■□ 3.77
TIPIN-206ENST00000570251 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
TIPIN-206ENST00000570251 SMARCA2P51531 1590 aa38.4■■■■□ 3.74
TIPIN-206ENST00000570251 HMGXB3Q12766 1538 aa38.39■■■■□ 3.74
TIPIN-206ENST00000570251 SMARCA4P51532 1647 aa38.31■■■■□ 3.72
TIPIN-206ENST00000570251 NESP48681 1621 aa38.16■■■■□ 3.7
TIPIN-206ENST00000570251 BAZ1BQ9UIG0 1483 aaKnown RBP38.1■■■■□ 3.69
TIPIN-206ENST00000570251 BAZ1AQ9NRL2 1556 aaPredicted RBP38.09■■■■□ 3.69
TIPIN-206ENST00000570251 PEG3Q9GZU2 1588 aa37.98■■■■□ 3.67
TIPIN-206ENST00000570251 THOC2Q8NI27 1593 aaKnown RBP37.94■■■■□ 3.66
TIPIN-206ENST00000570251 LAMC3Q9Y6N6 1575 aa37.91■■■■□ 3.66
TIPIN-206ENST00000570251 PDS5BQ9NTI5 1447 aa37.71■■■■□ 3.63
TIPIN-206ENST00000570251 MROH2BQ7Z745 1585 aa37.69■■■■□ 3.62
TIPIN-206ENST00000570251 KIF21AQ7Z4S6 1674 aa37.66■■■■□ 3.62
TIPIN-206ENST00000570251 CADPSQ9ULU8 1353 aa37.47■■■■□ 3.59
TIPIN-206ENST00000570251 MRC2Q9UBG0 1479 aa37.41■■■■□ 3.58
TIPIN-206ENST00000570251 WDR62O43379 1518 aa37.34■■■■□ 3.57
TIPIN-206ENST00000570251 TRIM41Q8WV44 630 aa37.26■■■■□ 3.56
TIPIN-206ENST00000570251 WIZO95785 1651 aa37.19■■■■□ 3.54
TIPIN-206ENST00000570251 CEP164Q9UPV0 1460 aa37.16■■■■□ 3.54
TIPIN-206ENST00000570251 FANCD2Q9BXW9 1451 aa37.05■■■■□ 3.52
TIPIN-206ENST00000570251 CFTRP13569 1480 aa36.95■■■■□ 3.51
TIPIN-206ENST00000570251 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
TIPIN-206ENST00000570251 TOP2AP11388 1531 aaKnown RBP36.77■■■■□ 3.48
TIPIN-206ENST00000570251 URB2Q14146 1524 aaKnown RBP36.75■■■■□ 3.47
TIPIN-206ENST00000570251 RSF1Q96T23 1441 aaPredicted RBP36.74■■■■□ 3.47
TIPIN-206ENST00000570251 PRDM2Q13029 1718 aa36.52■■■■□ 3.44
TIPIN-206ENST00000570251 IFT140Q96RY7 1462 aa36.44■■■■□ 3.42
TIPIN-206ENST00000570251 RIMBP3CA6NJZ7 1639 aa36.41■■■■□ 3.42
TIPIN-206ENST00000570251 RIMBP3BA6NNM3 1639 aa36.41■■■■□ 3.42
TIPIN-206ENST00000570251 RIMBP3Q9UFD9 1639 aa36.41■■■■□ 3.42
TIPIN-206ENST00000570251 ZNF608Q9ULD9 1512 aaPredicted RBP36.37■■■■□ 3.41
TIPIN-206ENST00000570251 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
TIPIN-206ENST00000570251 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
TIPIN-206ENST00000570251 ARHGEF11O15085 1522 aa36.27■■■■□ 3.4
TIPIN-206ENST00000570251 ABCC8Q09428 1581 aa36.23■■■■□ 3.39
TIPIN-206ENST00000570251 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
TIPIN-206ENST00000570251 DNMBPQ6XZF7 1577 aa36.14■■■■□ 3.38
TIPIN-206ENST00000570251 TARBP1Q13395 1621 aaKnown RBP35.99■■■■□ 3.35
TIPIN-206ENST00000570251 CYB5RLQ6IPT4 315 aa35.96■■■■□ 3.35
TIPIN-206ENST00000570251 AQRO60306 1485 aaKnown RBP eCLIP35.96■■■■□ 3.35
TIPIN-206ENST00000570251 CHD1O14646 1710 aa35.96■■■■□ 3.35
TIPIN-206ENST00000570251 POLA1P09884 1462 aaPredicted RBP35.89■■■■□ 3.34
TIPIN-206ENST00000570251 ARAP1Q96P48 1450 aa35.87■■■■□ 3.33
TIPIN-206ENST00000570251 FBLN2P98095 1184 aa35.82■■■■□ 3.32
TIPIN-206ENST00000570251 TRHP20396 242 aaPredicted RBP35.75■■■■□ 3.31
TIPIN-206ENST00000570251 RAD54L2Q9Y4B4 1467 aa35.71■■■■□ 3.31
TIPIN-206ENST00000570251 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
TIPIN-206ENST00000570251 SOGA1O94964 1423 aa35.69■■■■□ 3.3
TIPIN-206ENST00000570251 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
TIPIN-206ENST00000570251 SNAPC4Q5SXM2 1469 aa35.63■■■■□ 3.29
TIPIN-206ENST00000570251 CLASP1Q7Z460 1538 aa35.59■■■■□ 3.29
TIPIN-206ENST00000570251 FGD5Q6ZNL6 1462 aa35.58■■■■□ 3.29
TIPIN-206ENST00000570251 MAGI1Q96QZ7 1491 aaPredicted RBP35.56■■■■□ 3.28
TIPIN-206ENST00000570251 SYNJ1O43426 1573 aa35.55■■■■□ 3.28
TIPIN-206ENST00000570251 CHMP7Q8WUX9 453 aaPredicted RBP35.51■■■■□ 3.28
TIPIN-206ENST00000570251 GRIN2BQ13224 1484 aa35.49■■■■□ 3.27
TIPIN-206ENST00000570251 CUX1P39880 1505 aa35.46■■■■□ 3.27
TIPIN-206ENST00000570251 SYNJ2O15056 1496 aa35.43■■■■□ 3.26
TIPIN-206ENST00000570251 GAPVD1Q14C86 1478 aa35.28■■■■□ 3.24
TIPIN-206ENST00000570251 PBRM1Q86U86 1689 aa35.27■■■■□ 3.24
TIPIN-206ENST00000570251 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
TIPIN-206ENST00000570251 ABCA5Q8WWZ7 1642 aa35.16■■■■□ 3.22
TIPIN-206ENST00000570251 AEBP2Q6ZN18 517 aaPredicted RBP35.11■■■■□ 3.21
TIPIN-206ENST00000570251 GRIN2AQ12879 1464 aa35.03■■■■□ 3.2
TIPIN-206ENST00000570251 WRNQ14191 1432 aaPredicted RBP eCLIP34.95■■■■□ 3.19
TIPIN-206ENST00000570251 ADAMTS12P58397 1594 aa34.95■■■■□ 3.18
TIPIN-206ENST00000570251 ERCC6L2Q5T890 1561 aa34.93■■■■□ 3.18
TIPIN-206ENST00000570251 NUP160Q12769 1436 aa34.93■■■■□ 3.18
TIPIN-206ENST00000570251 CEP170Q5SW79 1584 aa34.9■■■■□ 3.18
TIPIN-206ENST00000570251 FHAD1B1AJZ9 1412 aa34.82■■■■□ 3.17
TIPIN-206ENST00000570251 SHROOM2Q13796 1616 aa34.82■■■■□ 3.16
TIPIN-206ENST00000570251 TOP2BQ02880 1626 aa34.78■■■■□ 3.16
TIPIN-206ENST00000570251 BIVM-ERCC5R4GMW8 1640 aa34.77■■■■□ 3.16
TIPIN-206ENST00000570251 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
TIPIN-206ENST00000570251 SUPT5HO00267 1087 aaKnown RBP34.66■■■■□ 3.14
TIPIN-206ENST00000570251 PRG4Q92954 1404 aaPredicted RBP34.61■■■■□ 3.13
TIPIN-206ENST00000570251 KIF13AQ9H1H9 1805 aa34.56■■■■□ 3.12
TIPIN-206ENST00000570251 JPH4Q96JJ6 628 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms