RNA–Protein interactions for RNA: ENST00000570046.1

CBFA2T3-211, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 3

Gene CBFA2T3, Length 284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-211ENST00000570046 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
CBFA2T3-211ENST00000570046 ABCC9O60706 1549 aa20.76■□□□□ 0.91
CBFA2T3-211ENST00000570046 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
CBFA2T3-211ENST00000570046 RB1CC1Q8TDY2 1594 aa19.78■□□□□ 0.76
CBFA2T3-211ENST00000570046 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
CBFA2T3-211ENST00000570046 NACADO15069 1562 aa19.61■□□□□ 0.73
CBFA2T3-211ENST00000570046 DNAJC5BQ9UF47 199 aa19.47■□□□□ 0.71
CBFA2T3-211ENST00000570046 ZCCHC6Q5VYS8 1495 aaKnown RBP19.37■□□□□ 0.69
CBFA2T3-211ENST00000570046 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
CBFA2T3-211ENST00000570046 PABPN1Q86U42 306 aaKnown RBP eCLIP19.32■□□□□ 0.68
CBFA2T3-211ENST00000570046 DCAF1Q9Y4B6 1507 aa19.25■□□□□ 0.67
CBFA2T3-211ENST00000570046 SHROOM4Q9ULL8 1493 aa19.04■□□□□ 0.64
CBFA2T3-211ENST00000570046 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
CBFA2T3-211ENST00000570046 UNC13AQ9UPW8 1703 aa19■□□□□ 0.63
CBFA2T3-211ENST00000570046 SCRIBQ14160 1630 aa18.82■□□□□ 0.6
CBFA2T3-211ENST00000570046 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
CBFA2T3-211ENST00000570046 CC2D2AQ9P2K1 1620 aa18.71■□□□□ 0.58
CBFA2T3-211ENST00000570046 EIF4G1Q04637 1599 aaKnown RBP18.67■□□□□ 0.58
CBFA2T3-211ENST00000570046 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
CBFA2T3-211ENST00000570046 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
CBFA2T3-211ENST00000570046 ERCC6Q03468 1493 aa18.08■□□□□ 0.49
CBFA2T3-211ENST00000570046 CUX2O14529 1486 aa18.07■□□□□ 0.48
CBFA2T3-211ENST00000570046 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
CBFA2T3-211ENST00000570046 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
CBFA2T3-211ENST00000570046 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
CBFA2T3-211ENST00000570046 SMARCA4P51532 1647 aa18■□□□□ 0.47
CBFA2T3-211ENST00000570046 HMGXB3Q12766 1538 aa17.94■□□□□ 0.46
CBFA2T3-211ENST00000570046 MROH2BQ7Z745 1585 aa17.93■□□□□ 0.46
CBFA2T3-211ENST00000570046 BAZ1BQ9UIG0 1483 aaKnown RBP17.87■□□□□ 0.45
CBFA2T3-211ENST00000570046 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
CBFA2T3-211ENST00000570046 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
CBFA2T3-211ENST00000570046 NESP48681 1621 aa17.72■□□□□ 0.43
CBFA2T3-211ENST00000570046 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
CBFA2T3-211ENST00000570046 LAMC3Q9Y6N6 1575 aa17.71■□□□□ 0.43
CBFA2T3-211ENST00000570046 WIZO95785 1651 aa17.66■□□□□ 0.42
CBFA2T3-211ENST00000570046 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
CBFA2T3-211ENST00000570046 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
CBFA2T3-211ENST00000570046 TOP2AP11388 1531 aaKnown RBP17.54■□□□□ 0.4
CBFA2T3-211ENST00000570046 MRC2Q9UBG0 1479 aa17.49■□□□□ 0.39
CBFA2T3-211ENST00000570046 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
CBFA2T3-211ENST00000570046 KIF21AQ7Z4S6 1674 aa17.43■□□□□ 0.38
CBFA2T3-211ENST00000570046 CEP164Q9UPV0 1460 aa17.41■□□□□ 0.38
CBFA2T3-211ENST00000570046 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
CBFA2T3-211ENST00000570046 WDR62O43379 1518 aa17.4■□□□□ 0.38
CBFA2T3-211ENST00000570046 CFTRP13569 1480 aa17.37■□□□□ 0.37
CBFA2T3-211ENST00000570046 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
CBFA2T3-211ENST00000570046 TRIM41Q8WV44 630 aa17.33■□□□□ 0.36
CBFA2T3-211ENST00000570046 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
CBFA2T3-211ENST00000570046 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
CBFA2T3-211ENST00000570046 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
CBFA2T3-211ENST00000570046 ABCC8Q09428 1581 aa17.06■□□□□ 0.32
CBFA2T3-211ENST00000570046 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
CBFA2T3-211ENST00000570046 PRDM2Q13029 1718 aa16.96■□□□□ 0.3
CBFA2T3-211ENST00000570046 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
CBFA2T3-211ENST00000570046 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
CBFA2T3-211ENST00000570046 FBLN2P98095 1184 aa16.86■□□□□ 0.29
CBFA2T3-211ENST00000570046 SOGA1O94964 1423 aa16.86■□□□□ 0.29
CBFA2T3-211ENST00000570046 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
CBFA2T3-211ENST00000570046 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
CBFA2T3-211ENST00000570046 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
CBFA2T3-211ENST00000570046 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
CBFA2T3-211ENST00000570046 EIF4G3O43432 1585 aaKnown RBP16.84■□□□□ 0.29
CBFA2T3-211ENST00000570046 POLA1P09884 1462 aaPredicted RBP16.83■□□□□ 0.28
CBFA2T3-211ENST00000570046 CUX1P39880 1505 aa16.81■□□□□ 0.28
CBFA2T3-211ENST00000570046 CYB5RLQ6IPT4 315 aa16.81■□□□□ 0.28
CBFA2T3-211ENST00000570046 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.283e-6■■■■■ 29.1
CBFA2T3-211ENST00000570046 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
CBFA2T3-211ENST00000570046 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
CBFA2T3-211ENST00000570046 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
CBFA2T3-211ENST00000570046 TDRD9Q8NDG6 1382 aaKnown RBP16.77■□□□□ 0.27
CBFA2T3-211ENST00000570046 TRHP20396 242 aaPredicted RBP16.75■□□□□ 0.27
CBFA2T3-211ENST00000570046 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
CBFA2T3-211ENST00000570046 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
CBFA2T3-211ENST00000570046 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
CBFA2T3-211ENST00000570046 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
CBFA2T3-211ENST00000570046 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
CBFA2T3-211ENST00000570046 SNAPC4Q5SXM2 1469 aa16.65■□□□□ 0.26
CBFA2T3-211ENST00000570046 CHD1O14646 1710 aa16.65■□□□□ 0.26
CBFA2T3-211ENST00000570046 SYNJ1O43426 1573 aa16.64■□□□□ 0.25
CBFA2T3-211ENST00000570046 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
CBFA2T3-211ENST00000570046 ARAP1Q96P48 1450 aa16.64■□□□□ 0.25
CBFA2T3-211ENST00000570046 ABCA10Q8WWZ4 1543 aa16.64■□□□□ 0.25
CBFA2T3-211ENST00000570046 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
CBFA2T3-211ENST00000570046 SYNJ2O15056 1496 aa16.61■□□□□ 0.25
CBFA2T3-211ENST00000570046 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
CBFA2T3-211ENST00000570046 CLASP1Q7Z460 1538 aa16.55■□□□□ 0.24
CBFA2T3-211ENST00000570046 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
CBFA2T3-211ENST00000570046 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
CBFA2T3-211ENST00000570046 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
CBFA2T3-211ENST00000570046 AEBP2Q6ZN18 517 aaPredicted RBP16.44■□□□□ 0.22
CBFA2T3-211ENST00000570046 IGF1RP08069 1367 aa16.43■□□□□ 0.22
CBFA2T3-211ENST00000570046 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
CBFA2T3-211ENST00000570046 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
CBFA2T3-211ENST00000570046 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
CBFA2T3-211ENST00000570046 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
CBFA2T3-211ENST00000570046 NUP160Q12769 1436 aa16.33■□□□□ 0.2
CBFA2T3-211ENST00000570046 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
CBFA2T3-211ENST00000570046 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
CBFA2T3-211ENST00000570046 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
CBFA2T3-211ENST00000570046 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms