RNA–Protein interactions for RNA: ENST00000570014.5

LMF1-215, Transcript of lipase maturation factor 1, humanhuman

TSL 5

Gene LMF1, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-215ENST00000570014 NISCHQ9Y2I1 1504 aa41.1■■■■■ 4.17
LMF1-215ENST00000570014 CCDC180Q9P1Z9 1646 aa36.81■■■■□ 3.48
LMF1-215ENST00000570014 ABCC9O60706 1549 aa36.29■■■■□ 3.4
LMF1-215ENST00000570014 RB1CC1Q8TDY2 1594 aa34.79■■■■□ 3.16
LMF1-215ENST00000570014 NACADO15069 1562 aa34.67■■■■□ 3.14
LMF1-215ENST00000570014 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
LMF1-215ENST00000570014 DCAF8L2P0C7V8 631 aa34.35■■■■□ 3.09
LMF1-215ENST00000570014 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
LMF1-215ENST00000570014 UNC13AQ9UPW8 1703 aa34.12■■■■□ 3.05
LMF1-215ENST00000570014 DCAF1Q9Y4B6 1507 aa34.04■■■■□ 3.04
LMF1-215ENST00000570014 PABPN1Q86U42 306 aaKnown RBP eCLIP33.79■■■■□ 3
LMF1-215ENST00000570014 BICRAQ9NZM4 1560 aa33.78■■■■□ 3
LMF1-215ENST00000570014 DNAJC5BQ9UF47 199 aa33.72■■■□□ 2.99
LMF1-215ENST00000570014 SCRIBQ14160 1630 aa33.42■■■□□ 2.94
LMF1-215ENST00000570014 SHROOM4Q9ULL8 1493 aa33.41■■■□□ 2.94
LMF1-215ENST00000570014 EIF4G1Q04637 1599 aaKnown RBP32.89■■■□□ 2.86
LMF1-215ENST00000570014 CC2D2AQ9P2K1 1620 aa32.88■■■□□ 2.85
LMF1-215ENST00000570014 CECR2Q9BXF3 1484 aa32.67■■■□□ 2.82
LMF1-215ENST00000570014 SMARCA4P51532 1647 aa32■■■□□ 2.71
LMF1-215ENST00000570014 NCAPD3P42695 1498 aa31.98■■■□□ 2.71
LMF1-215ENST00000570014 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
LMF1-215ENST00000570014 BAZ1AQ9NRL2 1556 aaPredicted RBP31.88■■■□□ 2.69
LMF1-215ENST00000570014 SMARCA2P51531 1590 aa31.86■■■□□ 2.69
LMF1-215ENST00000570014 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
LMF1-215ENST00000570014 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
LMF1-215ENST00000570014 MROH2BQ7Z745 1585 aa31.64■■■□□ 2.66
LMF1-215ENST00000570014 BAZ1BQ9UIG0 1483 aaKnown RBP31.59■■■□□ 2.65
LMF1-215ENST00000570014 WIZO95785 1651 aa31.31■■■□□ 2.6
LMF1-215ENST00000570014 ERCC6Q03468 1493 aa31.29■■■□□ 2.6
LMF1-215ENST00000570014 NESP48681 1621 aa31.29■■■□□ 2.6
LMF1-215ENST00000570014 LAMC3Q9Y6N6 1575 aa31.22■■■□□ 2.59
LMF1-215ENST00000570014 CUX2O14529 1486 aa31.21■■■□□ 2.59
LMF1-215ENST00000570014 RSF1Q96T23 1441 aaPredicted RBP31.11■■■□□ 2.57
LMF1-215ENST00000570014 CADPSQ9ULU8 1353 aa30.99■■■□□ 2.55
LMF1-215ENST00000570014 KIF21AQ7Z4S6 1674 aa30.99■■■□□ 2.55
LMF1-215ENST00000570014 THOC2Q8NI27 1593 aaKnown RBP30.98■■■□□ 2.55
LMF1-215ENST00000570014 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
LMF1-215ENST00000570014 TOP2AP11388 1531 aaKnown RBP30.93■■■□□ 2.54
LMF1-215ENST00000570014 DNAJC5Q9H3Z4 198 aa30.74■■■□□ 2.51
LMF1-215ENST00000570014 CFTRP13569 1480 aa30.73■■■□□ 2.51
LMF1-215ENST00000570014 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
LMF1-215ENST00000570014 CEP164Q9UPV0 1460 aa30.63■■■□□ 2.49
LMF1-215ENST00000570014 WDR62O43379 1518 aa30.63■■■□□ 2.49
LMF1-215ENST00000570014 FANCD2Q9BXW9 1451 aa30.62■■■□□ 2.49
LMF1-215ENST00000570014 PRDM2Q13029 1718 aa30.6■■■□□ 2.49
LMF1-215ENST00000570014 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
LMF1-215ENST00000570014 URB2Q14146 1524 aaKnown RBP30.36■■■□□ 2.45
LMF1-215ENST00000570014 TOPBP1Q92547 1522 aa30.11■■■□□ 2.41
LMF1-215ENST00000570014 ABCC8Q09428 1581 aa30.11■■■□□ 2.41
LMF1-215ENST00000570014 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
LMF1-215ENST00000570014 IFT140Q96RY7 1462 aa30.01■■■□□ 2.4
LMF1-215ENST00000570014 ZNF608Q9ULD9 1512 aaPredicted RBP29.9■■■□□ 2.38
LMF1-215ENST00000570014 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
LMF1-215ENST00000570014 TARBP1Q13395 1621 aaKnown RBP29.85■■■□□ 2.37
LMF1-215ENST00000570014 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
LMF1-215ENST00000570014 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
LMF1-215ENST00000570014 OSCARQ8IYS5 282 aa29.78■■■□□ 2.36
LMF1-215ENST00000570014 CUX1P39880 1505 aa29.71■■■□□ 2.35
LMF1-215ENST00000570014 SOGA1O94964 1423 aa29.66■■■□□ 2.34
LMF1-215ENST00000570014 AQRO60306 1485 aaKnown RBP eCLIP29.66■■■□□ 2.34
LMF1-215ENST00000570014 FGD5Q6ZNL6 1462 aa29.66■■■□□ 2.34
LMF1-215ENST00000570014 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
LMF1-215ENST00000570014 WDR97A6NE52 1622 aa29.63■■■□□ 2.33
LMF1-215ENST00000570014 CHD1O14646 1710 aa29.56■■■□□ 2.32
LMF1-215ENST00000570014 TDRD9Q8NDG6 1382 aaKnown RBP29.52■■■□□ 2.32
LMF1-215ENST00000570014 TRIM41Q8WV44 630 aa29.42■■■□□ 2.3
LMF1-215ENST00000570014 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
LMF1-215ENST00000570014 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
LMF1-215ENST00000570014 RIMBP3Q9UFD9 1639 aa29.41■■■□□ 2.3
LMF1-215ENST00000570014 BIVM-ERCC5R4GMW8 1640 aa29.41■■■□□ 2.3
LMF1-215ENST00000570014 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
LMF1-215ENST00000570014 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
LMF1-215ENST00000570014 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
LMF1-215ENST00000570014 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
LMF1-215ENST00000570014 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
LMF1-215ENST00000570014 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
LMF1-215ENST00000570014 ABCA5Q8WWZ7 1642 aa29.34■■■□□ 2.29
LMF1-215ENST00000570014 WRNQ14191 1432 aaPredicted RBP eCLIP29.33■■■□□ 2.293e-6■■■■■ 66.3
LMF1-215ENST00000570014 ARHGEF11O15085 1522 aa29.33■■■□□ 2.29
LMF1-215ENST00000570014 GAPVD1Q14C86 1478 aa29.32■■■□□ 2.28
LMF1-215ENST00000570014 FBLN2P98095 1184 aa29.32■■■□□ 2.28
LMF1-215ENST00000570014 SYNJ1O43426 1573 aa29.31■■■□□ 2.28
LMF1-215ENST00000570014 SYNJ2O15056 1496 aa29.25■■■□□ 2.27
LMF1-215ENST00000570014 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
LMF1-215ENST00000570014 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
LMF1-215ENST00000570014 ADAMTS12P58397 1594 aa29.06■■■□□ 2.24
LMF1-215ENST00000570014 ARAP1Q96P48 1450 aa29.05■■■□□ 2.24
LMF1-215ENST00000570014 ERICH3Q5RHP9 1530 aa29.04■■■□□ 2.24
LMF1-215ENST00000570014 CYB5RLQ6IPT4 315 aa29.02■■■□□ 2.24
LMF1-215ENST00000570014 GRIN2AQ12879 1464 aa29■■■□□ 2.23
LMF1-215ENST00000570014 FHAD1B1AJZ9 1412 aa28.97■■■□□ 2.23
LMF1-215ENST00000570014 NUP160Q12769 1436 aa28.92■■■□□ 2.22
LMF1-215ENST00000570014 CEP170Q5SW79 1584 aa28.89■■■□□ 2.22
LMF1-215ENST00000570014 SHROOM2Q13796 1616 aa28.8■■■□□ 2.2
LMF1-215ENST00000570014 KIF27Q86VH2 1401 aa28.75■■■□□ 2.19
LMF1-215ENST00000570014 ERCC6L2Q5T890 1561 aa28.72■■■□□ 2.19
LMF1-215ENST00000570014 CUL7Q14999 1698 aa28.71■■■□□ 2.19
LMF1-215ENST00000570014 IGF1RP08069 1367 aa28.71■■■□□ 2.19
LMF1-215ENST00000570014 RUSC2Q8N2Y8 1516 aa28.64■■■□□ 2.18
LMF1-215ENST00000570014 JPH4Q96JJ6 628 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms