RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 NISCHQ9Y2I1 1504 aa47.51■■■■■ 5.2
NAE1-222ENST00000569963 CCDC180Q9P1Z9 1646 aa42.12■■■■■ 4.33
NAE1-222ENST00000569963 ABCC9O60706 1549 aa40.9■■■■■ 4.14
NAE1-222ENST00000569963 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
NAE1-222ENST00000569963 NACADO15069 1562 aa39.56■■■■□ 3.92
NAE1-222ENST00000569963 DCAF8L2P0C7V8 631 aa39.53■■■■□ 3.92
NAE1-222ENST00000569963 RB1CC1Q8TDY2 1594 aa39.52■■■■□ 3.92
NAE1-222ENST00000569963 MYO15BQ96JP2 1530 aa39.46■■■■□ 3.91
NAE1-222ENST00000569963 DCAF1Q9Y4B6 1507 aa39.37■■■■□ 3.89
NAE1-222ENST00000569963 UNC13AQ9UPW8 1703 aa38.57■■■■□ 3.76
NAE1-222ENST00000569963 SCRIBQ14160 1630 aa38.38■■■■□ 3.73
NAE1-222ENST00000569963 BICRAQ9NZM4 1560 aa38.3■■■■□ 3.72
NAE1-222ENST00000569963 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
NAE1-222ENST00000569963 SHROOM4Q9ULL8 1493 aa37.99■■■■□ 3.67
NAE1-222ENST00000569963 DNAJC5BQ9UF47 199 aa37.34■■■■□ 3.57
NAE1-222ENST00000569963 EIF4G1Q04637 1599 aaKnown RBP37.26■■■■□ 3.56
NAE1-222ENST00000569963 CC2D2AQ9P2K1 1620 aa37.03■■■■□ 3.52
NAE1-222ENST00000569963 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
NAE1-222ENST00000569963 BAZ1AQ9NRL2 1556 aaPredicted RBP36.8■■■■□ 3.48
NAE1-222ENST00000569963 SMARCA4P51532 1647 aa36.77■■■■□ 3.48
NAE1-222ENST00000569963 MROH2BQ7Z745 1585 aa36.58■■■■□ 3.45
NAE1-222ENST00000569963 ATAD2BQ9ULI0 1458 aa36.54■■■■□ 3.44
NAE1-222ENST00000569963 NCAPD3P42695 1498 aa36.52■■■■□ 3.44
NAE1-222ENST00000569963 SMARCA2P51531 1590 aa36.52■■■■□ 3.44
NAE1-222ENST00000569963 PEG3Q9GZU2 1588 aa36.47■■■■□ 3.43
NAE1-222ENST00000569963 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
NAE1-222ENST00000569963 RSF1Q96T23 1441 aaPredicted RBP36.28■■■■□ 3.4
NAE1-222ENST00000569963 BAZ1BQ9UIG0 1483 aaKnown RBP36.23■■■■□ 3.39
NAE1-222ENST00000569963 WIZO95785 1651 aa36.19■■■■□ 3.38
NAE1-222ENST00000569963 TOP2AP11388 1531 aaKnown RBP35.85■■■■□ 3.33
NAE1-222ENST00000569963 SUPT5HO00267 1087 aaKnown RBP35.5■■■■□ 3.27
NAE1-222ENST00000569963 LAMC3Q9Y6N6 1575 aa35.48■■■■□ 3.27
NAE1-222ENST00000569963 NESP48681 1621 aa35.47■■■■□ 3.27
NAE1-222ENST00000569963 CADPSQ9ULU8 1353 aa35.45■■■■□ 3.27
NAE1-222ENST00000569963 CCDC88BA6NC98 1476 aa35.43■■■■□ 3.26
NAE1-222ENST00000569963 CFTRP13569 1480 aa35.29■■■■□ 3.24
NAE1-222ENST00000569963 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
NAE1-222ENST00000569963 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
NAE1-222ENST00000569963 KIF21AQ7Z4S6 1674 aa35.05■■■■□ 3.2
NAE1-222ENST00000569963 FANCD2Q9BXW9 1451 aa35.01■■■■□ 3.19
NAE1-222ENST00000569963 PRDM2Q13029 1718 aa35.01■■■■□ 3.19
NAE1-222ENST00000569963 CEP164Q9UPV0 1460 aa34.94■■■■□ 3.18
NAE1-222ENST00000569963 THOC2Q8NI27 1593 aaKnown RBP34.89■■■■□ 3.18
NAE1-222ENST00000569963 CUX2O14529 1486 aa34.84■■■■□ 3.17
NAE1-222ENST00000569963 MRC2Q9UBG0 1479 aa34.84■■■■□ 3.17
NAE1-222ENST00000569963 WDR62O43379 1518 aa34.72■■■■□ 3.15
NAE1-222ENST00000569963 URB2Q14146 1524 aaKnown RBP34.63■■■■□ 3.13
NAE1-222ENST00000569963 ABCC8Q09428 1581 aa34.56■■■■□ 3.12
NAE1-222ENST00000569963 TOPBP1Q92547 1522 aa34.48■■■■□ 3.11
NAE1-222ENST00000569963 DNMBPQ6XZF7 1577 aa34.46■■■■□ 3.11
NAE1-222ENST00000569963 CUX1P39880 1505 aa34.3■■■■□ 3.08
NAE1-222ENST00000569963 IFT140Q96RY7 1462 aa34.22■■■■□ 3.07
NAE1-222ENST00000569963 WRNQ14191 1432 aaPredicted RBP eCLIP34.2■■■■□ 3.06
NAE1-222ENST00000569963 POLA1P09884 1462 aaPredicted RBP34.2■■■■□ 3.06
NAE1-222ENST00000569963 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
NAE1-222ENST00000569963 TOP2BQ02880 1626 aa34.1■■■■□ 3.05
NAE1-222ENST00000569963 SOGA1O94964 1423 aa34.09■■■■□ 3.05
NAE1-222ENST00000569963 TARBP1Q13395 1621 aaKnown RBP34.08■■■■□ 3.05
NAE1-222ENST00000569963 BIVM-ERCC5R4GMW8 1640 aa34.08■■■■□ 3.05
NAE1-222ENST00000569963 SYNJ1O43426 1573 aa34.06■■■■□ 3.04
NAE1-222ENST00000569963 RAD54L2Q9Y4B4 1467 aa34.02■■■■□ 3.04
NAE1-222ENST00000569963 ZNF608Q9ULD9 1512 aaPredicted RBP33.99■■■■□ 3.03
NAE1-222ENST00000569963 WDR97A6NE52 1622 aa33.89■■■■□ 3.02
NAE1-222ENST00000569963 EIF4G3O43432 1585 aaKnown RBP33.87■■■■□ 3.01
NAE1-222ENST00000569963 ABCA10Q8WWZ4 1543 aa33.87■■■■□ 3.01
NAE1-222ENST00000569963 AQRO60306 1485 aaKnown RBP eCLIP33.85■■■■□ 3.014e-10■■■■□ 22.4
NAE1-222ENST00000569963 TDRD9Q8NDG6 1382 aaKnown RBP33.84■■■■□ 3.01
NAE1-222ENST00000569963 GAPVD1Q14C86 1478 aa33.69■■■□□ 2.98
NAE1-222ENST00000569963 ABCA5Q8WWZ7 1642 aa33.68■■■□□ 2.98
NAE1-222ENST00000569963 GRIN2BQ13224 1484 aa33.66■■■□□ 2.98
NAE1-222ENST00000569963 TRIM41Q8WV44 630 aa33.58■■■□□ 2.97
NAE1-222ENST00000569963 PBRM1Q86U86 1689 aa33.56■■■□□ 2.96
NAE1-222ENST00000569963 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
NAE1-222ENST00000569963 SNAPC4Q5SXM2 1469 aa33.54■■■□□ 2.96
NAE1-222ENST00000569963 DNAJC5Q9H3Z4 198 aa33.49■■■□□ 2.95
NAE1-222ENST00000569963 KIF27Q86VH2 1401 aa33.48■■■□□ 2.95
NAE1-222ENST00000569963 ERICH3Q5RHP9 1530 aa33.47■■■□□ 2.95
NAE1-222ENST00000569963 OSCARQ8IYS5 282 aa33.46■■■□□ 2.95
NAE1-222ENST00000569963 SYNJ2O15056 1496 aa33.41■■■□□ 2.94
NAE1-222ENST00000569963 FBLN2P98095 1184 aa33.38■■■□□ 2.93
NAE1-222ENST00000569963 CHD1O14646 1710 aa33.38■■■□□ 2.93
NAE1-222ENST00000569963 CHMP7Q8WUX9 453 aaPredicted RBP33.37■■■□□ 2.93
NAE1-222ENST00000569963 CHIC1Q5VXU3 224 aa33.34■■■□□ 2.93
NAE1-222ENST00000569963 FHAD1B1AJZ9 1412 aa33.33■■■□□ 2.93
NAE1-222ENST00000569963 IGF1RP08069 1367 aa33.33■■■□□ 2.93
NAE1-222ENST00000569963 ADAMTS12P58397 1594 aa33.32■■■□□ 2.92
NAE1-222ENST00000569963 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
NAE1-222ENST00000569963 RUSC2Q8N2Y8 1516 aa33.21■■■□□ 2.91
NAE1-222ENST00000569963 CUL7Q14999 1698 aa33.2■■■□□ 2.9
NAE1-222ENST00000569963 CARMIL1Q5VZK9 1371 aa33.12■■■□□ 2.89
NAE1-222ENST00000569963 CLASP1Q7Z460 1538 aa33.07■■■□□ 2.89
NAE1-222ENST00000569963 NUP160Q12769 1436 aa33.07■■■□□ 2.88
NAE1-222ENST00000569963 EEA1Q15075 1411 aa33.04■■■□□ 2.88
NAE1-222ENST00000569963 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
NAE1-222ENST00000569963 RAPGEF2Q9Y4G8 1499 aa32.95■■■□□ 2.87
NAE1-222ENST00000569963 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.87
NAE1-222ENST00000569963 PRXQ9BXM0 1461 aa32.91■■■□□ 2.86
NAE1-222ENST00000569963 ARHGEF11O15085 1522 aa32.86■■■□□ 2.85
NAE1-222ENST00000569963 KIAA0586Q9BVV6 1533 aa32.83■■■□□ 2.85
NAE1-222ENST00000569963 RIMBP3CA6NJZ7 1639 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms