RNA–Protein interactions for RNA: ENST00000569935.1

DHX38-212, Transcript of DEAH-box helicase 38, humanhuman

TSL 2

Gene DHX38, Length 907 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX38-212ENST00000569935 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
DHX38-212ENST00000569935 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
DHX38-212ENST00000569935 ABCC9O60706 1549 aa35.21■■■■□ 3.23
DHX38-212ENST00000569935 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
DHX38-212ENST00000569935 NACADO15069 1562 aa33.3■■■□□ 2.92
DHX38-212ENST00000569935 DCAF8L2P0C7V8 631 aa33.13■■■□□ 2.89
DHX38-212ENST00000569935 DNAJC5BQ9UF47 199 aa33.04■■■□□ 2.88
DHX38-212ENST00000569935 MYO15BQ96JP2 1530 aa32.88■■■□□ 2.85
DHX38-212ENST00000569935 PABPN1Q86U42 306 aaKnown RBP eCLIP32.81■■■□□ 2.84
DHX38-212ENST00000569935 UNC13AQ9UPW8 1703 aa32.79■■■□□ 2.84
DHX38-212ENST00000569935 ZCCHC6Q5VYS8 1495 aaKnown RBP32.66■■■□□ 2.82
DHX38-212ENST00000569935 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
DHX38-212ENST00000569935 DCAF1Q9Y4B6 1507 aa32.51■■■□□ 2.79
DHX38-212ENST00000569935 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
DHX38-212ENST00000569935 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
DHX38-212ENST00000569935 CC2D2AQ9P2K1 1620 aa31.79■■■□□ 2.68
DHX38-212ENST00000569935 EIF4G1Q04637 1599 aaKnown RBP31.76■■■□□ 2.67
DHX38-212ENST00000569935 CECR2Q9BXF3 1484 aa31.68■■■□□ 2.66
DHX38-212ENST00000569935 NCAPD3P42695 1498 aa30.78■■■□□ 2.52
DHX38-212ENST00000569935 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.51
DHX38-212ENST00000569935 SMARCA4P51532 1647 aa30.68■■■□□ 2.5
DHX38-212ENST00000569935 SMARCA2P51531 1590 aa30.56■■■□□ 2.48
DHX38-212ENST00000569935 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
DHX38-212ENST00000569935 BAZ1AQ9NRL2 1556 aaPredicted RBP30.52■■■□□ 2.48
DHX38-212ENST00000569935 PEG3Q9GZU2 1588 aa30.4■■■□□ 2.46
DHX38-212ENST00000569935 BAZ1BQ9UIG0 1483 aaKnown RBP30.38■■■□□ 2.45
DHX38-212ENST00000569935 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
DHX38-212ENST00000569935 ERCC6Q03468 1493 aa30.31■■■□□ 2.44
DHX38-212ENST00000569935 NESP48681 1621 aa30.31■■■□□ 2.44
DHX38-212ENST00000569935 CUX2O14529 1486 aa30.25■■■□□ 2.43
DHX38-212ENST00000569935 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
DHX38-212ENST00000569935 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
DHX38-212ENST00000569935 WIZO95785 1651 aa29.99■■■□□ 2.39
DHX38-212ENST00000569935 THOC2Q8NI27 1593 aaKnown RBP29.94■■■□□ 2.38
DHX38-212ENST00000569935 KIF21AQ7Z4S6 1674 aa29.86■■■□□ 2.37
DHX38-212ENST00000569935 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
DHX38-212ENST00000569935 CADPSQ9ULU8 1353 aa29.83■■■□□ 2.37
DHX38-212ENST00000569935 RSF1Q96T23 1441 aaPredicted RBP29.78■■■□□ 2.36
DHX38-212ENST00000569935 MRC2Q9UBG0 1479 aa29.61■■■□□ 2.33
DHX38-212ENST00000569935 TOP2AP11388 1531 aaKnown RBP29.6■■■□□ 2.33
DHX38-212ENST00000569935 WDR62O43379 1518 aa29.55■■■□□ 2.32
DHX38-212ENST00000569935 CFTRP13569 1480 aa29.53■■■□□ 2.32
DHX38-212ENST00000569935 FANCD2Q9BXW9 1451 aa29.49■■■□□ 2.31
DHX38-212ENST00000569935 CEP164Q9UPV0 1460 aa29.49■■■□□ 2.31
DHX38-212ENST00000569935 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
DHX38-212ENST00000569935 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
DHX38-212ENST00000569935 PRDM2Q13029 1718 aa29.16■■■□□ 2.26
DHX38-212ENST00000569935 TOPBP1Q92547 1522 aa28.96■■■□□ 2.23
DHX38-212ENST00000569935 ZNF608Q9ULD9 1512 aaPredicted RBP28.92■■■□□ 2.22
DHX38-212ENST00000569935 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
DHX38-212ENST00000569935 OSCARQ8IYS5 282 aa28.88■■■□□ 2.21
DHX38-212ENST00000569935 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
DHX38-212ENST00000569935 DNMBPQ6XZF7 1577 aa28.84■■■□□ 2.21
DHX38-212ENST00000569935 ABCC8Q09428 1581 aa28.83■■■□□ 2.21
DHX38-212ENST00000569935 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
DHX38-212ENST00000569935 EIF4G3O43432 1585 aaKnown RBP28.71■■■□□ 2.19
DHX38-212ENST00000569935 POLA1P09884 1462 aaPredicted RBP28.67■■■□□ 2.18
DHX38-212ENST00000569935 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.185e-13■■■□□ 18.1
DHX38-212ENST00000569935 RAD54L2Q9Y4B4 1467 aa28.59■■■□□ 2.17
DHX38-212ENST00000569935 RIMBP3CA6NJZ7 1639 aa28.54■■■□□ 2.16
DHX38-212ENST00000569935 RIMBP3BA6NNM3 1639 aa28.54■■■□□ 2.16
DHX38-212ENST00000569935 RIMBP3Q9UFD9 1639 aa28.54■■■□□ 2.16
DHX38-212ENST00000569935 CUX1P39880 1505 aa28.53■■■□□ 2.16
DHX38-212ENST00000569935 SOGA1O94964 1423 aa28.52■■■□□ 2.16
DHX38-212ENST00000569935 FGD5Q6ZNL6 1462 aa28.51■■■□□ 2.15
DHX38-212ENST00000569935 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
DHX38-212ENST00000569935 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
DHX38-212ENST00000569935 CHD1O14646 1710 aa28.47■■■□□ 2.15
DHX38-212ENST00000569935 ARHGEF11O15085 1522 aa28.46■■■□□ 2.15
DHX38-212ENST00000569935 FBLN2P98095 1184 aa28.37■■■□□ 2.13
DHX38-212ENST00000569935 WDR97A6NE52 1622 aa28.34■■■□□ 2.13
DHX38-212ENST00000569935 SNAPC4Q5SXM2 1469 aa28.34■■■□□ 2.13
DHX38-212ENST00000569935 GRIN2BQ13224 1484 aa28.26■■■□□ 2.11
DHX38-212ENST00000569935 MAGI1Q96QZ7 1491 aaPredicted RBP28.24■■■□□ 2.11
DHX38-212ENST00000569935 CYB5RLQ6IPT4 315 aa28.23■■■□□ 2.11
DHX38-212ENST00000569935 ARAP1Q96P48 1450 aa28.21■■■□□ 2.11
DHX38-212ENST00000569935 CLASP1Q7Z460 1538 aa28.19■■■□□ 2.1
DHX38-212ENST00000569935 ABCA10Q8WWZ4 1543 aa28.18■■■□□ 2.1
DHX38-212ENST00000569935 GAPVD1Q14C86 1478 aa28.17■■■□□ 2.1
DHX38-212ENST00000569935 CHMP7Q8WUX9 453 aaPredicted RBP28.17■■■□□ 2.1
DHX38-212ENST00000569935 SYNJ2O15056 1496 aa28.15■■■□□ 2.1
DHX38-212ENST00000569935 ABCA5Q8WWZ7 1642 aa28.14■■■□□ 2.1
DHX38-212ENST00000569935 PBRM1Q86U86 1689 aa28.13■■■□□ 2.09
DHX38-212ENST00000569935 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
DHX38-212ENST00000569935 WRNQ14191 1432 aaPredicted RBP eCLIP28.06■■■□□ 2.08
DHX38-212ENST00000569935 TOP2BQ02880 1626 aa28.05■■■□□ 2.08
DHX38-212ENST00000569935 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
DHX38-212ENST00000569935 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
DHX38-212ENST00000569935 GRIN2AQ12879 1464 aa27.91■■■□□ 2.06
DHX38-212ENST00000569935 CEP170Q5SW79 1584 aa27.84■■■□□ 2.05
DHX38-212ENST00000569935 TRHP20396 242 aaPredicted RBP27.83■■■□□ 2.05
DHX38-212ENST00000569935 NUP160Q12769 1436 aa27.83■■■□□ 2.05
DHX38-212ENST00000569935 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
DHX38-212ENST00000569935 ERICH3Q5RHP9 1530 aa27.8■■■□□ 2.04
DHX38-212ENST00000569935 ERCC6L2Q5T890 1561 aa27.8■■■□□ 2.04
DHX38-212ENST00000569935 SHROOM2Q13796 1616 aa27.69■■■□□ 2.02
DHX38-212ENST00000569935 PRG4Q92954 1404 aaPredicted RBP27.53■■■□□ 2
DHX38-212ENST00000569935 IGF1RP08069 1367 aa27.53■■■□□ 2
DHX38-212ENST00000569935 RUSC2Q8N2Y8 1516 aa27.52■■■□□ 2
DHX38-212ENST00000569935 JPH4Q96JJ6 628 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms