RNA–Protein interactions for RNA: ENST00000569863.5

NUP93-221, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-221ENST00000569863 NISCHQ9Y2I1 1504 aa41.13■■■■■ 4.17
NUP93-221ENST00000569863 CCDC180Q9P1Z9 1646 aa36.6■■■■□ 3.45
NUP93-221ENST00000569863 ABCC9O60706 1549 aa36.03■■■■□ 3.36
NUP93-221ENST00000569863 RB1CC1Q8TDY2 1594 aa34.54■■■■□ 3.12
NUP93-221ENST00000569863 NACADO15069 1562 aa34.44■■■■□ 3.1
NUP93-221ENST00000569863 DCAF8L2P0C7V8 631 aa34.36■■■■□ 3.09
NUP93-221ENST00000569863 ZCCHC6Q5VYS8 1495 aaKnown RBP34.24■■■■□ 3.07
NUP93-221ENST00000569863 MYO15BQ96JP2 1530 aa34.24■■■■□ 3.07
NUP93-221ENST00000569863 DCAF1Q9Y4B6 1507 aa34.05■■■■□ 3.04
NUP93-221ENST00000569863 UNC13AQ9UPW8 1703 aa33.87■■■■□ 3.01
NUP93-221ENST00000569863 PABPN1Q86U42 306 aaKnown RBP eCLIP33.6■■■□□ 2.97
NUP93-221ENST00000569863 BICRAQ9NZM4 1560 aa33.48■■■□□ 2.95
NUP93-221ENST00000569863 SCRIBQ14160 1630 aa33.35■■■□□ 2.93
NUP93-221ENST00000569863 DNAJC5BQ9UF47 199 aa33.33■■■□□ 2.93
NUP93-221ENST00000569863 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
NUP93-221ENST00000569863 EIF4G1Q04637 1599 aaKnown RBP32.63■■■□□ 2.81
NUP93-221ENST00000569863 CC2D2AQ9P2K1 1620 aa32.61■■■□□ 2.81
NUP93-221ENST00000569863 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
NUP93-221ENST00000569863 SMARCA4P51532 1647 aa31.92■■■□□ 2.7
NUP93-221ENST00000569863 BAZ1AQ9NRL2 1556 aaPredicted RBP31.89■■■□□ 2.7
NUP93-221ENST00000569863 NCAPD3P42695 1498 aa31.78■■■□□ 2.68
NUP93-221ENST00000569863 ATAD2BQ9ULI0 1458 aa31.77■■■□□ 2.68
NUP93-221ENST00000569863 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
NUP93-221ENST00000569863 MROH2BQ7Z745 1585 aa31.67■■■□□ 2.66
NUP93-221ENST00000569863 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
NUP93-221ENST00000569863 HMGXB3Q12766 1538 aa31.62■■■□□ 2.65
NUP93-221ENST00000569863 BAZ1BQ9UIG0 1483 aaKnown RBP31.51■■■□□ 2.63
NUP93-221ENST00000569863 WIZO95785 1651 aa31.32■■■□□ 2.6
NUP93-221ENST00000569863 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
NUP93-221ENST00000569863 ERCC6Q03468 1493 aa31.09■■■□□ 2.57
NUP93-221ENST00000569863 NESP48681 1621 aa31.09■■■□□ 2.57
NUP93-221ENST00000569863 TOP2AP11388 1531 aaKnown RBP31.01■■■□□ 2.55
NUP93-221ENST00000569863 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
NUP93-221ENST00000569863 CUX2O14529 1486 aa30.85■■■□□ 2.53
NUP93-221ENST00000569863 CADPSQ9ULU8 1353 aa30.84■■■□□ 2.53
NUP93-221ENST00000569863 KIF21AQ7Z4S6 1674 aa30.79■■■□□ 2.52
NUP93-221ENST00000569863 PDS5BQ9NTI5 1447 aa30.75■■■□□ 2.51
NUP93-221ENST00000569863 THOC2Q8NI27 1593 aaKnown RBP30.7■■■□□ 2.5
NUP93-221ENST00000569863 CFTRP13569 1480 aa30.65■■■□□ 2.5
NUP93-221ENST00000569863 CCDC88BA6NC98 1476 aa30.64■■■□□ 2.5
NUP93-221ENST00000569863 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
NUP93-221ENST00000569863 MRC2Q9UBG0 1479 aa30.45■■■□□ 2.47
NUP93-221ENST00000569863 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
NUP93-221ENST00000569863 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
NUP93-221ENST00000569863 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
NUP93-221ENST00000569863 WDR62O43379 1518 aa30.37■■■□□ 2.45
NUP93-221ENST00000569863 DNAJC5Q9H3Z4 198 aa30.29■■■□□ 2.44
NUP93-221ENST00000569863 URB2Q14146 1524 aaKnown RBP30.17■■■□□ 2.42
NUP93-221ENST00000569863 ABCC8Q09428 1581 aa30.01■■■□□ 2.39
NUP93-221ENST00000569863 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
NUP93-221ENST00000569863 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
NUP93-221ENST00000569863 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
NUP93-221ENST00000569863 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
NUP93-221ENST00000569863 CUX1P39880 1505 aa29.72■■■□□ 2.35
NUP93-221ENST00000569863 ZNF608Q9ULD9 1512 aaPredicted RBP29.7■■■□□ 2.34
NUP93-221ENST00000569863 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
NUP93-221ENST00000569863 FGD5Q6ZNL6 1462 aa29.63■■■□□ 2.33
NUP93-221ENST00000569863 SOGA1O94964 1423 aa29.61■■■□□ 2.33
NUP93-221ENST00000569863 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
NUP93-221ENST00000569863 RAD54L2Q9Y4B4 1467 aa29.58■■■□□ 2.33
NUP93-221ENST00000569863 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
NUP93-221ENST00000569863 WRNQ14191 1432 aaPredicted RBP eCLIP29.52■■■□□ 2.32
NUP93-221ENST00000569863 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
NUP93-221ENST00000569863 TOP2BQ02880 1626 aa29.46■■■□□ 2.31
NUP93-221ENST00000569863 WDR97A6NE52 1622 aa29.45■■■□□ 2.31
NUP93-221ENST00000569863 BIVM-ERCC5R4GMW8 1640 aa29.45■■■□□ 2.31
NUP93-221ENST00000569863 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
NUP93-221ENST00000569863 SYNJ1O43426 1573 aa29.43■■■□□ 2.3
NUP93-221ENST00000569863 CHD1O14646 1710 aa29.37■■■□□ 2.29
NUP93-221ENST00000569863 ABCA10Q8WWZ4 1543 aa29.36■■■□□ 2.29
NUP93-221ENST00000569863 GRIN2BQ13224 1484 aa29.28■■■□□ 2.28
NUP93-221ENST00000569863 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
NUP93-221ENST00000569863 FBLN2P98095 1184 aa29.24■■■□□ 2.27
NUP93-221ENST00000569863 ABCA5Q8WWZ7 1642 aa29.23■■■□□ 2.27
NUP93-221ENST00000569863 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
NUP93-221ENST00000569863 PBRM1Q86U86 1689 aa29.22■■■□□ 2.27
NUP93-221ENST00000569863 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
NUP93-221ENST00000569863 TRIM41Q8WV44 630 aa29.19■■■□□ 2.26
NUP93-221ENST00000569863 RIMBP3CA6NJZ7 1639 aa29.13■■■□□ 2.25
NUP93-221ENST00000569863 RIMBP3BA6NNM3 1639 aa29.13■■■□□ 2.25
NUP93-221ENST00000569863 RIMBP3Q9UFD9 1639 aa29.13■■■□□ 2.25
NUP93-221ENST00000569863 SYNJ2O15056 1496 aa29.1■■■□□ 2.25
NUP93-221ENST00000569863 CHMP7Q8WUX9 453 aaPredicted RBP29.09■■■□□ 2.25
NUP93-221ENST00000569863 ARHGEF11O15085 1522 aa29.05■■■□□ 2.24
NUP93-221ENST00000569863 ERICH3Q5RHP9 1530 aa29.02■■■□□ 2.24
NUP93-221ENST00000569863 ADAMTS12P58397 1594 aa28.96■■■□□ 2.23
NUP93-221ENST00000569863 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
NUP93-221ENST00000569863 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
NUP93-221ENST00000569863 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
NUP93-221ENST00000569863 GRIN2AQ12879 1464 aa28.9■■■□□ 2.22
NUP93-221ENST00000569863 CYB5RLQ6IPT4 315 aa28.82■■■□□ 2.2
NUP93-221ENST00000569863 IGF1RP08069 1367 aa28.8■■■□□ 2.2
NUP93-221ENST00000569863 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
NUP93-221ENST00000569863 NUP160Q12769 1436 aa28.77■■■□□ 2.2
NUP93-221ENST00000569863 CEP170Q5SW79 1584 aa28.74■■■□□ 2.19
NUP93-221ENST00000569863 CUL7Q14999 1698 aa28.73■■■□□ 2.19
NUP93-221ENST00000569863 CARMIL1Q5VZK9 1371 aa28.63■■■□□ 2.17
NUP93-221ENST00000569863 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
NUP93-221ENST00000569863 SHROOM2Q13796 1616 aa28.57■■■□□ 2.16
NUP93-221ENST00000569863 ERCC6L2Q5T890 1561 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms