RNA–Protein interactions for RNA: ENST00000569680.1

ARID3B-205, Transcript of AT-rich interaction domain 3B, humanhuman

TSL 1 (best)

Gene ARID3B, Length 2,654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3B-205ENST00000569680 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
ARID3B-205ENST00000569680 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
ARID3B-205ENST00000569680 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
ARID3B-205ENST00000569680 SHROOM4Q9ULL8 1493 aa17.58■□□□□ 0.4
ARID3B-205ENST00000569680 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
ARID3B-205ENST00000569680 DCAF1Q9Y4B6 1507 aa17.33■□□□□ 0.37
ARID3B-205ENST00000569680 ABCC9O60706 1549 aa17.06■□□□□ 0.32
ARID3B-205ENST00000569680 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
ARID3B-205ENST00000569680 SUPT5HO00267 1087 aaKnown RBP16.97■□□□□ 0.31
ARID3B-205ENST00000569680 NACADO15069 1562 aa16.87■□□□□ 0.29
ARID3B-205ENST00000569680 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
ARID3B-205ENST00000569680 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
ARID3B-205ENST00000569680 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
ARID3B-205ENST00000569680 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
ARID3B-205ENST00000569680 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.21
ARID3B-205ENST00000569680 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
ARID3B-205ENST00000569680 MROH2BQ7Z745 1585 aa16.29■□□□□ 0.2
ARID3B-205ENST00000569680 PABPN1Q86U42 306 aaKnown RBP eCLIP16.24■□□□□ 0.19
ARID3B-205ENST00000569680 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.18
ARID3B-205ENST00000569680 BICRAQ9NZM4 1560 aa16.18■□□□□ 0.18
ARID3B-205ENST00000569680 WIZO95785 1651 aa16.16■□□□□ 0.18
ARID3B-205ENST00000569680 SMARCA4P51532 1647 aa16.09■□□□□ 0.17
ARID3B-205ENST00000569680 HRCP23327 699 aa16.02■□□□□ 0.15
ARID3B-205ENST00000569680 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
ARID3B-205ENST00000569680 TRIM41Q8WV44 630 aa15.91■□□□□ 0.14
ARID3B-205ENST00000569680 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
ARID3B-205ENST00000569680 PPARGC1BQ86YN6 1023 aaKnown RBP15.88■□□□□ 0.13
ARID3B-205ENST00000569680 CCDC88BA6NC98 1476 aa15.86■□□□□ 0.13
ARID3B-205ENST00000569680 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
ARID3B-205ENST00000569680 SMARCA2P51531 1590 aa15.83■□□□□ 0.12
ARID3B-205ENST00000569680 ATAD2BQ9ULI0 1458 aa15.8■□□□□ 0.12
ARID3B-205ENST00000569680 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
ARID3B-205ENST00000569680 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
ARID3B-205ENST00000569680 FAM9AQ8IZU1 332 aaPredicted RBP15.77■□□□□ 0.12
ARID3B-205ENST00000569680 EIF4G1Q04637 1599 aaKnown RBP15.77■□□□□ 0.11
ARID3B-205ENST00000569680 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
ARID3B-205ENST00000569680 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
ARID3B-205ENST00000569680 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
ARID3B-205ENST00000569680 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
ARID3B-205ENST00000569680 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
ARID3B-205ENST00000569680 WRNQ14191 1432 aaPredicted RBP eCLIP15.48■□□□□ 0.07
ARID3B-205ENST00000569680 SLC24A1O60721 1099 aa15.43■□□□□ 0.06
ARID3B-205ENST00000569680 SOGA1O94964 1423 aa15.41■□□□□ 0.06
ARID3B-205ENST00000569680 CC2D2AQ9P2K1 1620 aa15.4■□□□□ 0.06
ARID3B-205ENST00000569680 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
ARID3B-205ENST00000569680 DNAJC5Q9H3Z4 198 aa15.36■□□□□ 0.05
ARID3B-205ENST00000569680 EEA1Q15075 1411 aa15.35■□□□□ 0.05
ARID3B-205ENST00000569680 CFTRP13569 1480 aa15.35■□□□□ 0.05
ARID3B-205ENST00000569680 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
ARID3B-205ENST00000569680 CSRNP3Q8WYN3 585 aa15.33■□□□□ 0.05
ARID3B-205ENST00000569680 PELP1Q8IZL8 1130 aaKnown RBP15.32■□□□□ 0.04
ARID3B-205ENST00000569680 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
ARID3B-205ENST00000569680 TOP2BQ02880 1626 aa15.27■□□□□ 0.04
ARID3B-205ENST00000569680 CADPSQ9ULU8 1353 aa15.27■□□□□ 0.03
ARID3B-205ENST00000569680 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
ARID3B-205ENST00000569680 TRIM26Q12899 539 aaPredicted RBP15.21■□□□□ 0.03
ARID3B-205ENST00000569680 CUX1P39880 1505 aa15.2■□□□□ 0.02
ARID3B-205ENST00000569680 UBTFP17480 764 aaKnown RBP15.2■□□□□ 0.02
ARID3B-205ENST00000569680 TTBK1Q5TCY1 1321 aaPredicted RBP15.2■□□□□ 0.02
ARID3B-205ENST00000569680 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
ARID3B-205ENST00000569680 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
ARID3B-205ENST00000569680 GOLGA3Q08378 1498 aa15.17■□□□□ 0.02
ARID3B-205ENST00000569680 PRDM2Q13029 1718 aa15.16■□□□□ 0.02
ARID3B-205ENST00000569680 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
ARID3B-205ENST00000569680 CEP162Q5TB80 1403 aa15.15■□□□□ 0.02
ARID3B-205ENST00000569680 KIF21BO75037 1637 aa15.12■□□□□ 0.01
ARID3B-205ENST00000569680 CUX2O14529 1486 aa15.09■□□□□ 0.01
ARID3B-205ENST00000569680 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0.01
ARID3B-205ENST00000569680 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
ARID3B-205ENST00000569680 KIF27Q86VH2 1401 aa15.07■□□□□ 0
ARID3B-205ENST00000569680 NESP48681 1621 aa15.06■□□□□ 0
ARID3B-205ENST00000569680 PRXQ9BXM0 1461 aa15.02□□□□□ -0.01
ARID3B-205ENST00000569680 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
ARID3B-205ENST00000569680 LAMC3Q9Y6N6 1575 aa15□□□□□ -0.01
ARID3B-205ENST00000569680 CLIP1P30622 1438 aa14.98□□□□□ -0.01
ARID3B-205ENST00000569680 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
ARID3B-205ENST00000569680 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
ARID3B-205ENST00000569680 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
ARID3B-205ENST00000569680 PDS5BQ9NTI5 1447 aa14.93□□□□□ -0.02
ARID3B-205ENST00000569680 IGF1RP08069 1367 aa14.93□□□□□ -0.02
ARID3B-205ENST00000569680 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
ARID3B-205ENST00000569680 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
ARID3B-205ENST00000569680 URB2Q14146 1524 aaKnown RBP14.88□□□□□ -0.03
ARID3B-205ENST00000569680 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
ARID3B-205ENST00000569680 VPS8Q8N3P4 1428 aa14.86□□□□□ -0.03
ARID3B-205ENST00000569680 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
ARID3B-205ENST00000569680 ABCA10Q8WWZ4 1543 aa14.86□□□□□ -0.03
ARID3B-205ENST00000569680 NEUROD1Q13562 356 aa14.83□□□□□ -0.03
ARID3B-205ENST00000569680 KIF21AQ7Z4S6 1674 aa14.8□□□□□ -0.04
ARID3B-205ENST00000569680 APLP2Q06481 763 aa14.79□□□□□ -0.04
ARID3B-205ENST00000569680 ACIN1Q9UKV3 1341 aaKnown RBP14.79□□□□□ -0.04
ARID3B-205ENST00000569680 ARAP1Q96P48 1450 aa14.77□□□□□ -0.05
ARID3B-205ENST00000569680 TDRD9Q8NDG6 1382 aaKnown RBP14.75□□□□□ -0.05
ARID3B-205ENST00000569680 ARHGAP35Q9NRY4 1499 aa14.73□□□□□ -0.05
ARID3B-205ENST00000569680 GTF3C3Q9Y5Q9 886 aa14.73□□□□□ -0.05
ARID3B-205ENST00000569680 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
ARID3B-205ENST00000569680 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
ARID3B-205ENST00000569680 GAPVD1Q14C86 1478 aa14.7□□□□□ -0.06
ARID3B-205ENST00000569680 CUL7Q14999 1698 aa14.69□□□□□ -0.06
ARID3B-205ENST00000569680 ABCA5Q8WWZ7 1642 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms