RNA–Protein interactions for RNA: ENST00000569619.5

KIFC3-234, Transcript of kinesin family member C3, humanhuman

TSL 3

Gene KIFC3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-234ENST00000569619 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
KIFC3-234ENST00000569619 ABCC9O60706 1549 aa25.81■■□□□ 1.72
KIFC3-234ENST00000569619 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
KIFC3-234ENST00000569619 DCAF8L2P0C7V8 631 aa24.63■■□□□ 1.53
KIFC3-234ENST00000569619 RB1CC1Q8TDY2 1594 aa24.54■■□□□ 1.52
KIFC3-234ENST00000569619 NACADO15069 1562 aa24.4■■□□□ 1.5
KIFC3-234ENST00000569619 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
KIFC3-234ENST00000569619 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
KIFC3-234ENST00000569619 MYO15BQ96JP2 1530 aa24.07■■□□□ 1.44
KIFC3-234ENST00000569619 ZCCHC6Q5VYS8 1495 aaKnown RBP24.02■■□□□ 1.44
KIFC3-234ENST00000569619 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
KIFC3-234ENST00000569619 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
KIFC3-234ENST00000569619 BICRAQ9NZM4 1560 aa23.8■■□□□ 1.4
KIFC3-234ENST00000569619 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
KIFC3-234ENST00000569619 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
KIFC3-234ENST00000569619 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
KIFC3-234ENST00000569619 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
KIFC3-234ENST00000569619 CECR2Q9BXF3 1484 aa23.2■■□□□ 1.3
KIFC3-234ENST00000569619 NCAPD3P42695 1498 aa22.57■■□□□ 1.2
KIFC3-234ENST00000569619 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
KIFC3-234ENST00000569619 SMARCA4P51532 1647 aa22.52■■□□□ 1.2
KIFC3-234ENST00000569619 SMARCA2P51531 1590 aa22.46■■□□□ 1.19
KIFC3-234ENST00000569619 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
KIFC3-234ENST00000569619 HMGXB3Q12766 1538 aa22.36■■□□□ 1.17
KIFC3-234ENST00000569619 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
KIFC3-234ENST00000569619 MROH2BQ7Z745 1585 aa22.34■■□□□ 1.17
KIFC3-234ENST00000569619 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
KIFC3-234ENST00000569619 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
KIFC3-234ENST00000569619 NESP48681 1621 aa22.21■■□□□ 1.15
KIFC3-234ENST00000569619 CUX2O14529 1486 aa22.07■■□□□ 1.12
KIFC3-234ENST00000569619 WIZO95785 1651 aa22.06■■□□□ 1.12
KIFC3-234ENST00000569619 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
KIFC3-234ENST00000569619 RSF1Q96T23 1441 aaPredicted RBP21.97■■□□□ 1.11
KIFC3-234ENST00000569619 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
KIFC3-234ENST00000569619 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
KIFC3-234ENST00000569619 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
KIFC3-234ENST00000569619 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
KIFC3-234ENST00000569619 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
KIFC3-234ENST00000569619 TOP2AP11388 1531 aaKnown RBP21.78■■□□□ 1.08
KIFC3-234ENST00000569619 MRC2Q9UBG0 1479 aa21.71■■□□□ 1.07
KIFC3-234ENST00000569619 CFTRP13569 1480 aa21.69■■□□□ 1.06
KIFC3-234ENST00000569619 FANCD2Q9BXW9 1451 aa21.68■■□□□ 1.06
KIFC3-234ENST00000569619 CEP164Q9UPV0 1460 aa21.67■■□□□ 1.06
KIFC3-234ENST00000569619 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
KIFC3-234ENST00000569619 WDR62O43379 1518 aa21.6■■□□□ 1.05
KIFC3-234ENST00000569619 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
KIFC3-234ENST00000569619 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1.01
KIFC3-234ENST00000569619 PRDM2Q13029 1718 aa21.31■■□□□ 1
KIFC3-234ENST00000569619 TOPBP1Q92547 1522 aa21.27■■□□□ 1
KIFC3-234ENST00000569619 IFT140Q96RY7 1462 aa21.23■□□□□ 0.99
KIFC3-234ENST00000569619 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
KIFC3-234ENST00000569619 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
KIFC3-234ENST00000569619 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
KIFC3-234ENST00000569619 TRIM41Q8WV44 630 aa21.18■□□□□ 0.98
KIFC3-234ENST00000569619 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
KIFC3-234ENST00000569619 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.963e-9■■■■■ 42.8
KIFC3-234ENST00000569619 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
KIFC3-234ENST00000569619 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
KIFC3-234ENST00000569619 SOGA1O94964 1423 aa21.04■□□□□ 0.96
KIFC3-234ENST00000569619 EIF4G3O43432 1585 aaKnown RBP21.02■□□□□ 0.95
KIFC3-234ENST00000569619 FBLN2P98095 1184 aa21.01■□□□□ 0.95
KIFC3-234ENST00000569619 TARBP1Q13395 1621 aaKnown RBP21■□□□□ 0.95
KIFC3-234ENST00000569619 TDRD9Q8NDG6 1382 aaKnown RBP21■□□□□ 0.95
KIFC3-234ENST00000569619 FGD5Q6ZNL6 1462 aa20.98■□□□□ 0.95
KIFC3-234ENST00000569619 CUX1P39880 1505 aa20.98■□□□□ 0.95
KIFC3-234ENST00000569619 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
KIFC3-234ENST00000569619 CHMP7Q8WUX9 453 aaPredicted RBP20.83■□□□□ 0.93
KIFC3-234ENST00000569619 RIMBP3CA6NJZ7 1639 aa20.8■□□□□ 0.92
KIFC3-234ENST00000569619 RIMBP3BA6NNM3 1639 aa20.8■□□□□ 0.92
KIFC3-234ENST00000569619 RIMBP3Q9UFD9 1639 aa20.8■□□□□ 0.92
KIFC3-234ENST00000569619 CHD1O14646 1710 aa20.8■□□□□ 0.92
KIFC3-234ENST00000569619 GRIN2BQ13224 1484 aa20.79■□□□□ 0.92
KIFC3-234ENST00000569619 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
KIFC3-234ENST00000569619 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
KIFC3-234ENST00000569619 GAPVD1Q14C86 1478 aa20.75■□□□□ 0.91
KIFC3-234ENST00000569619 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
KIFC3-234ENST00000569619 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
KIFC3-234ENST00000569619 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
KIFC3-234ENST00000569619 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
KIFC3-234ENST00000569619 SYNJ2O15056 1496 aa20.68■□□□□ 0.9
KIFC3-234ENST00000569619 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
KIFC3-234ENST00000569619 TOP2BQ02880 1626 aa20.64■□□□□ 0.9
KIFC3-234ENST00000569619 PBRM1Q86U86 1689 aa20.61■□□□□ 0.89
KIFC3-234ENST00000569619 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
KIFC3-234ENST00000569619 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
KIFC3-234ENST00000569619 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
KIFC3-234ENST00000569619 CLASP1Q7Z460 1538 aa20.58■□□□□ 0.89
KIFC3-234ENST00000569619 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
KIFC3-234ENST00000569619 TRHP20396 242 aaPredicted RBP20.5■□□□□ 0.87
KIFC3-234ENST00000569619 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
KIFC3-234ENST00000569619 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
KIFC3-234ENST00000569619 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
KIFC3-234ENST00000569619 NUP160Q12769 1436 aa20.42■□□□□ 0.86
KIFC3-234ENST00000569619 CEP170Q5SW79 1584 aa20.4■□□□□ 0.86
KIFC3-234ENST00000569619 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
KIFC3-234ENST00000569619 KIF27Q86VH2 1401 aa20.34■□□□□ 0.85
KIFC3-234ENST00000569619 IGF1RP08069 1367 aa20.33■□□□□ 0.84
KIFC3-234ENST00000569619 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
KIFC3-234ENST00000569619 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
KIFC3-234ENST00000569619 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms