RNA–Protein interactions for RNA: ENST00000569471.1

SH2B1-214, Transcript of SH2B adaptor protein 1, humanhuman

TSL 3

Gene SH2B1, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-214ENST00000569471 NISCHQ9Y2I1 1504 aa34.87■■■■□ 3.17
SH2B1-214ENST00000569471 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
SH2B1-214ENST00000569471 ABCC9O60706 1549 aa30.12■■■□□ 2.41
SH2B1-214ENST00000569471 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
SH2B1-214ENST00000569471 DCAF8L2P0C7V8 631 aa29.06■■■□□ 2.24
SH2B1-214ENST00000569471 NACADO15069 1562 aa28.96■■■□□ 2.23
SH2B1-214ENST00000569471 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
SH2B1-214ENST00000569471 MYO15BQ96JP2 1530 aa28.82■■■□□ 2.2
SH2B1-214ENST00000569471 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
SH2B1-214ENST00000569471 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
SH2B1-214ENST00000569471 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
SH2B1-214ENST00000569471 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.16e-6■■□□□ 12
SH2B1-214ENST00000569471 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
SH2B1-214ENST00000569471 SHROOM4Q9ULL8 1493 aa27.78■■■□□ 2.04
SH2B1-214ENST00000569471 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
SH2B1-214ENST00000569471 EIF4G1Q04637 1599 aaKnown RBP27.38■■□□□ 1.97
SH2B1-214ENST00000569471 CC2D2AQ9P2K1 1620 aa27.22■■□□□ 1.95
SH2B1-214ENST00000569471 CECR2Q9BXF3 1484 aa27.21■■□□□ 1.95
SH2B1-214ENST00000569471 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
SH2B1-214ENST00000569471 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
SH2B1-214ENST00000569471 MROH2BQ7Z745 1585 aa26.93■■□□□ 1.9
SH2B1-214ENST00000569471 ATAD2BQ9ULI0 1458 aa26.82■■□□□ 1.88
SH2B1-214ENST00000569471 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SH2B1-214ENST00000569471 NCAPD3P42695 1498 aa26.74■■□□□ 1.87
SH2B1-214ENST00000569471 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
SH2B1-214ENST00000569471 RSF1Q96T23 1441 aaPredicted RBP26.67■■□□□ 1.86
SH2B1-214ENST00000569471 WIZO95785 1651 aa26.66■■□□□ 1.86
SH2B1-214ENST00000569471 HMGXB3Q12766 1538 aa26.65■■□□□ 1.86
SH2B1-214ENST00000569471 BAZ1BQ9UIG0 1483 aaKnown RBP26.62■■□□□ 1.85
SH2B1-214ENST00000569471 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
SH2B1-214ENST00000569471 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
SH2B1-214ENST00000569471 NESP48681 1621 aa26.15■■□□□ 1.78
SH2B1-214ENST00000569471 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
SH2B1-214ENST00000569471 DNAJC5Q9H3Z4 198 aa26.03■■□□□ 1.76
SH2B1-214ENST00000569471 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
SH2B1-214ENST00000569471 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
SH2B1-214ENST00000569471 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
SH2B1-214ENST00000569471 CFTRP13569 1480 aa25.88■■□□□ 1.73
SH2B1-214ENST00000569471 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
SH2B1-214ENST00000569471 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
SH2B1-214ENST00000569471 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
SH2B1-214ENST00000569471 PRDM2Q13029 1718 aa25.69■■□□□ 1.7
SH2B1-214ENST00000569471 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
SH2B1-214ENST00000569471 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
SH2B1-214ENST00000569471 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
SH2B1-214ENST00000569471 CUX2O14529 1486 aa25.5■■□□□ 1.67
SH2B1-214ENST00000569471 WDR62O43379 1518 aa25.5■■□□□ 1.67
SH2B1-214ENST00000569471 URB2Q14146 1524 aaKnown RBP25.49■■□□□ 1.67
SH2B1-214ENST00000569471 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
SH2B1-214ENST00000569471 DNMBPQ6XZF7 1577 aa25.31■■□□□ 1.64
SH2B1-214ENST00000569471 CUX1P39880 1505 aa25.26■■□□□ 1.63
SH2B1-214ENST00000569471 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
SH2B1-214ENST00000569471 POLA1P09884 1462 aaPredicted RBP25.15■■□□□ 1.62
SH2B1-214ENST00000569471 FGD5Q6ZNL6 1462 aa25.12■■□□□ 1.61
SH2B1-214ENST00000569471 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
SH2B1-214ENST00000569471 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
SH2B1-214ENST00000569471 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
SH2B1-214ENST00000569471 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.6
SH2B1-214ENST00000569471 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
SH2B1-214ENST00000569471 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
SH2B1-214ENST00000569471 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
SH2B1-214ENST00000569471 BIVM-ERCC5R4GMW8 1640 aa25.04■■□□□ 1.6
SH2B1-214ENST00000569471 SOGA1O94964 1423 aa25■■□□□ 1.59
SH2B1-214ENST00000569471 EIF4G3O43432 1585 aaKnown RBP24.94■■□□□ 1.58
SH2B1-214ENST00000569471 WDR97A6NE52 1622 aa24.91■■□□□ 1.58
SH2B1-214ENST00000569471 AQRO60306 1485 aaKnown RBP eCLIP24.9■■□□□ 1.585e-8■■■■■ 43
SH2B1-214ENST00000569471 TDRD9Q8NDG6 1382 aaKnown RBP24.89■■□□□ 1.57
SH2B1-214ENST00000569471 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
SH2B1-214ENST00000569471 ABCA5Q8WWZ7 1642 aa24.76■■□□□ 1.55
SH2B1-214ENST00000569471 GAPVD1Q14C86 1478 aa24.73■■□□□ 1.55
SH2B1-214ENST00000569471 PBRM1Q86U86 1689 aa24.69■■□□□ 1.54
SH2B1-214ENST00000569471 GRIN2BQ13224 1484 aa24.69■■□□□ 1.54
SH2B1-214ENST00000569471 SNAPC4Q5SXM2 1469 aa24.69■■□□□ 1.54
SH2B1-214ENST00000569471 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
SH2B1-214ENST00000569471 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
SH2B1-214ENST00000569471 CHD1O14646 1710 aa24.58■■□□□ 1.52
SH2B1-214ENST00000569471 KIF27Q86VH2 1401 aa24.55■■□□□ 1.52
SH2B1-214ENST00000569471 ERICH3Q5RHP9 1530 aa24.53■■□□□ 1.52
SH2B1-214ENST00000569471 FBLN2P98095 1184 aa24.53■■□□□ 1.52
SH2B1-214ENST00000569471 ADAMTS12P58397 1594 aa24.53■■□□□ 1.52
SH2B1-214ENST00000569471 CHIC1Q5VXU3 224 aa24.52■■□□□ 1.52
SH2B1-214ENST00000569471 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
SH2B1-214ENST00000569471 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
SH2B1-214ENST00000569471 OSCARQ8IYS5 282 aa24.45■■□□□ 1.5
SH2B1-214ENST00000569471 CHMP7Q8WUX9 453 aaPredicted RBP24.45■■□□□ 1.5
SH2B1-214ENST00000569471 IGF1RP08069 1367 aa24.44■■□□□ 1.5
SH2B1-214ENST00000569471 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
SH2B1-214ENST00000569471 GRIN2AQ12879 1464 aa24.39■■□□□ 1.5
SH2B1-214ENST00000569471 CUL7Q14999 1698 aa24.35■■□□□ 1.49
SH2B1-214ENST00000569471 CEP170Q5SW79 1584 aa24.31■■□□□ 1.48
SH2B1-214ENST00000569471 CLASP1Q7Z460 1538 aa24.3■■□□□ 1.48
SH2B1-214ENST00000569471 CARMIL1Q5VZK9 1371 aa24.29■■□□□ 1.48
SH2B1-214ENST00000569471 NUP160Q12769 1436 aa24.27■■□□□ 1.48
SH2B1-214ENST00000569471 FAM9AQ8IZU1 332 aaPredicted RBP24.22■■□□□ 1.47
SH2B1-214ENST00000569471 RAPGEF2Q9Y4G8 1499 aa24.17■■□□□ 1.46
SH2B1-214ENST00000569471 EEA1Q15075 1411 aa24.17■■□□□ 1.46
SH2B1-214ENST00000569471 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
SH2B1-214ENST00000569471 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
SH2B1-214ENST00000569471 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.46
SH2B1-214ENST00000569471 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms