RNA–Protein interactions for RNA: ENST00000569364.5

ACSM2B-219, Transcript of acyl-CoA synthetase medium chain family member 2B, humanhuman

TSL 1 (best)

Gene ACSM2B, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM2B-219ENST00000569364 NISCHQ9Y2I1 1504 aa37.86■■■■□ 3.65
ACSM2B-219ENST00000569364 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
ACSM2B-219ENST00000569364 ZCCHC6Q5VYS8 1495 aaKnown RBP31.83■■■□□ 2.69
ACSM2B-219ENST00000569364 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
ACSM2B-219ENST00000569364 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
ACSM2B-219ENST00000569364 ABCC9O60706 1549 aa31.12■■■□□ 2.57
ACSM2B-219ENST00000569364 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
ACSM2B-219ENST00000569364 MYO15BQ96JP2 1530 aa30.9■■■□□ 2.54
ACSM2B-219ENST00000569364 NACADO15069 1562 aa30.7■■■□□ 2.5
ACSM2B-219ENST00000569364 RB1CC1Q8TDY2 1594 aa30.42■■■□□ 2.46
ACSM2B-219ENST00000569364 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
ACSM2B-219ENST00000569364 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
ACSM2B-219ENST00000569364 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
ACSM2B-219ENST00000569364 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
ACSM2B-219ENST00000569364 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
ACSM2B-219ENST00000569364 RSF1Q96T23 1441 aaPredicted RBP29.39■■■□□ 2.3
ACSM2B-219ENST00000569364 PABPN1Q86U42 306 aaKnown RBP eCLIP29.33■■■□□ 2.29
ACSM2B-219ENST00000569364 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
ACSM2B-219ENST00000569364 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
ACSM2B-219ENST00000569364 SMARCA4P51532 1647 aa29.11■■■□□ 2.25
ACSM2B-219ENST00000569364 WIZO95785 1651 aa29.05■■■□□ 2.24
ACSM2B-219ENST00000569364 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
ACSM2B-219ENST00000569364 TOP2AP11388 1531 aaKnown RBP28.73■■■□□ 2.19
ACSM2B-219ENST00000569364 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
ACSM2B-219ENST00000569364 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
ACSM2B-219ENST00000569364 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
ACSM2B-219ENST00000569364 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
ACSM2B-219ENST00000569364 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
ACSM2B-219ENST00000569364 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
ACSM2B-219ENST00000569364 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
ACSM2B-219ENST00000569364 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
ACSM2B-219ENST00000569364 CC2D2AQ9P2K1 1620 aa28.19■■■□□ 2.1
ACSM2B-219ENST00000569364 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
ACSM2B-219ENST00000569364 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
ACSM2B-219ENST00000569364 CFTRP13569 1480 aa27.72■■■□□ 2.03
ACSM2B-219ENST00000569364 PRDM2Q13029 1718 aa27.66■■■□□ 2.02
ACSM2B-219ENST00000569364 WRNQ14191 1432 aaPredicted RBP eCLIP27.65■■■□□ 2.02
ACSM2B-219ENST00000569364 CADPSQ9ULU8 1353 aa27.59■■■□□ 2.01
ACSM2B-219ENST00000569364 SYNJ1O43426 1573 aa27.58■■■□□ 2.01
ACSM2B-219ENST00000569364 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
ACSM2B-219ENST00000569364 TOP2BQ02880 1626 aa27.45■■□□□ 1.99
ACSM2B-219ENST00000569364 LOC105371045A0A1W2PR82 267 aa27.45■■□□□ 1.99
ACSM2B-219ENST00000569364 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
ACSM2B-219ENST00000569364 BIVM-ERCC5R4GMW8 1640 aa27.44■■□□□ 1.98
ACSM2B-219ENST00000569364 CUX1P39880 1505 aa27.37■■□□□ 1.97
ACSM2B-219ENST00000569364 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
ACSM2B-219ENST00000569364 NESP48681 1621 aa27.36■■□□□ 1.97
ACSM2B-219ENST00000569364 SOGA1O94964 1423 aa27.34■■□□□ 1.97
ACSM2B-219ENST00000569364 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
ACSM2B-219ENST00000569364 EEA1Q15075 1411 aa27.28■■□□□ 1.96
ACSM2B-219ENST00000569364 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
ACSM2B-219ENST00000569364 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
ACSM2B-219ENST00000569364 PDS5BQ9NTI5 1447 aa27.11■■□□□ 1.93
ACSM2B-219ENST00000569364 CSRNP3Q8WYN3 585 aa27.11■■□□□ 1.93
ACSM2B-219ENST00000569364 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
ACSM2B-219ENST00000569364 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
ACSM2B-219ENST00000569364 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
ACSM2B-219ENST00000569364 FGD5Q6ZNL6 1462 aa27.04■■□□□ 1.92
ACSM2B-219ENST00000569364 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
ACSM2B-219ENST00000569364 URB2Q14146 1524 aaKnown RBP26.98■■□□□ 1.91
ACSM2B-219ENST00000569364 KIF21BO75037 1637 aa26.97■■□□□ 1.91
ACSM2B-219ENST00000569364 KIF27Q86VH2 1401 aa26.93■■□□□ 1.9
ACSM2B-219ENST00000569364 GOLGA3Q08378 1498 aa26.92■■□□□ 1.9
ACSM2B-219ENST00000569364 POLA1P09884 1462 aaPredicted RBP26.9■■□□□ 1.9
ACSM2B-219ENST00000569364 CUX2O14529 1486 aa26.86■■□□□ 1.89
ACSM2B-219ENST00000569364 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
ACSM2B-219ENST00000569364 RAD54L2Q9Y4B4 1467 aa26.81■■□□□ 1.88
ACSM2B-219ENST00000569364 ABCA10Q8WWZ4 1543 aa26.8■■□□□ 1.88
ACSM2B-219ENST00000569364 PRXQ9BXM0 1461 aa26.8■■□□□ 1.88
ACSM2B-219ENST00000569364 RAPGEF2Q9Y4G8 1499 aa26.79■■□□□ 1.88
ACSM2B-219ENST00000569364 MRC2Q9UBG0 1479 aa26.78■■□□□ 1.88
ACSM2B-219ENST00000569364 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
ACSM2B-219ENST00000569364 UBTFP17480 764 aaKnown RBP26.76■■□□□ 1.87
ACSM2B-219ENST00000569364 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
ACSM2B-219ENST00000569364 CEP162Q5TB80 1403 aa26.72■■□□□ 1.87
ACSM2B-219ENST00000569364 IGF1RP08069 1367 aa26.69■■□□□ 1.86
ACSM2B-219ENST00000569364 WDR62O43379 1518 aa26.66■■□□□ 1.86
ACSM2B-219ENST00000569364 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
ACSM2B-219ENST00000569364 TARBP1Q13395 1621 aaKnown RBP26.64■■□□□ 1.86
ACSM2B-219ENST00000569364 ABCA5Q8WWZ7 1642 aa26.61■■□□□ 1.85
ACSM2B-219ENST00000569364 THOC2Q8NI27 1593 aaKnown RBP26.59■■□□□ 1.85
ACSM2B-219ENST00000569364 CARMIL1Q5VZK9 1371 aa26.56■■□□□ 1.84
ACSM2B-219ENST00000569364 CUL7Q14999 1698 aa26.52■■□□□ 1.84
ACSM2B-219ENST00000569364 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
ACSM2B-219ENST00000569364 GAPVD1Q14C86 1478 aa26.51■■□□□ 1.83
ACSM2B-219ENST00000569364 CLIP1P30622 1438 aa26.49■■□□□ 1.83
ACSM2B-219ENST00000569364 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
ACSM2B-219ENST00000569364 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
ACSM2B-219ENST00000569364 AQRO60306 1485 aaKnown RBP eCLIP26.35■■□□□ 1.81
ACSM2B-219ENST00000569364 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
ACSM2B-219ENST00000569364 RANGAP1P46060 587 aaPredicted RBP26.31■■□□□ 1.8
ACSM2B-219ENST00000569364 GRIN2BQ13224 1484 aa26.28■■□□□ 1.8
ACSM2B-219ENST00000569364 VPS8Q8N3P4 1428 aa26.28■■□□□ 1.8
ACSM2B-219ENST00000569364 EIF4G3O43432 1585 aaKnown RBP26.27■■□□□ 1.8
ACSM2B-219ENST00000569364 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
ACSM2B-219ENST00000569364 ARAP1Q96P48 1450 aa26.26■■□□□ 1.79
ACSM2B-219ENST00000569364 ADAMTS12P58397 1594 aa26.25■■□□□ 1.79
ACSM2B-219ENST00000569364 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
ACSM2B-219ENST00000569364 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
ACSM2B-219ENST00000569364 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms