RNA–Protein interactions for RNA: ENST00000569296.5

NAGPA-215, Transcript of N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase, humanhuman

TSL 5

Gene NAGPA, Length 866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAGPA-215ENST00000569296 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
NAGPA-215ENST00000569296 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
NAGPA-215ENST00000569296 ABCC9O60706 1549 aa36.25■■■■□ 3.39
NAGPA-215ENST00000569296 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
NAGPA-215ENST00000569296 NACADO15069 1562 aa34.82■■■■□ 3.16
NAGPA-215ENST00000569296 DCAF8L2P0C7V8 631 aa34.73■■■■□ 3.15
NAGPA-215ENST00000569296 MYO15BQ96JP2 1530 aa34.62■■■■□ 3.13
NAGPA-215ENST00000569296 ZCCHC6Q5VYS8 1495 aaKnown RBP34.56■■■■□ 3.12
NAGPA-215ENST00000569296 DCAF1Q9Y4B6 1507 aa34.4■■■■□ 3.1
NAGPA-215ENST00000569296 UNC13AQ9UPW8 1703 aa33.96■■■■□ 3.03
NAGPA-215ENST00000569296 PABPN1Q86U42 306 aaKnown RBP eCLIP33.87■■■■□ 3.01
NAGPA-215ENST00000569296 BICRAQ9NZM4 1560 aa33.77■■■■□ 3
NAGPA-215ENST00000569296 SCRIBQ14160 1630 aa33.65■■■□□ 2.98
NAGPA-215ENST00000569296 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
NAGPA-215ENST00000569296 DNAJC5BQ9UF47 199 aa33.41■■■□□ 2.94
NAGPA-215ENST00000569296 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
NAGPA-215ENST00000569296 CC2D2AQ9P2K1 1620 aa32.79■■■□□ 2.84
NAGPA-215ENST00000569296 CECR2Q9BXF3 1484 aa32.62■■■□□ 2.81
NAGPA-215ENST00000569296 SMARCA4P51532 1647 aa32.22■■■□□ 2.75
NAGPA-215ENST00000569296 BAZ1AQ9NRL2 1556 aaPredicted RBP32.2■■■□□ 2.75
NAGPA-215ENST00000569296 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
NAGPA-215ENST00000569296 ATAD2BQ9ULI0 1458 aa32.11■■■□□ 2.73
NAGPA-215ENST00000569296 SMARCA2P51531 1590 aa32.07■■■□□ 2.72
NAGPA-215ENST00000569296 MROH2BQ7Z745 1585 aa31.97■■■□□ 2.71
NAGPA-215ENST00000569296 PEG3Q9GZU2 1588 aa31.95■■■□□ 2.71
NAGPA-215ENST00000569296 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
NAGPA-215ENST00000569296 BAZ1BQ9UIG0 1483 aaKnown RBP31.83■■■□□ 2.69
NAGPA-215ENST00000569296 RSF1Q96T23 1441 aaPredicted RBP31.59■■■□□ 2.65
NAGPA-215ENST00000569296 WIZO95785 1651 aa31.58■■■□□ 2.65
NAGPA-215ENST00000569296 NESP48681 1621 aa31.32■■■□□ 2.6
NAGPA-215ENST00000569296 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
NAGPA-215ENST00000569296 TOP2AP11388 1531 aaKnown RBP31.29■■■□□ 2.6
NAGPA-215ENST00000569296 ERCC6Q03468 1493 aa31.28■■■□□ 2.6
NAGPA-215ENST00000569296 CADPSQ9ULU8 1353 aa31.2■■■□□ 2.59
NAGPA-215ENST00000569296 PDS5BQ9NTI5 1447 aa31.12■■■□□ 2.57
NAGPA-215ENST00000569296 CUX2O14529 1486 aa31.04■■■□□ 2.56
NAGPA-215ENST00000569296 CFTRP13569 1480 aa30.98■■■□□ 2.55
NAGPA-215ENST00000569296 CCDC88BA6NC98 1476 aa30.94■■■□□ 2.54
NAGPA-215ENST00000569296 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
NAGPA-215ENST00000569296 THOC2Q8NI27 1593 aaKnown RBP30.88■■■□□ 2.53
NAGPA-215ENST00000569296 FANCD2Q9BXW9 1451 aa30.8■■■□□ 2.52
NAGPA-215ENST00000569296 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
NAGPA-215ENST00000569296 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.52
NAGPA-215ENST00000569296 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
NAGPA-215ENST00000569296 WDR62O43379 1518 aa30.66■■■□□ 2.5
NAGPA-215ENST00000569296 PRDM2Q13029 1718 aa30.63■■■□□ 2.49
NAGPA-215ENST00000569296 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
NAGPA-215ENST00000569296 ABCC8Q09428 1581 aa30.35■■■□□ 2.45
NAGPA-215ENST00000569296 TOPBP1Q92547 1522 aa30.29■■■□□ 2.44
NAGPA-215ENST00000569296 DNAJC5Q9H3Z4 198 aa30.25■■■□□ 2.43
NAGPA-215ENST00000569296 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
NAGPA-215ENST00000569296 IFT140Q96RY7 1462 aa30.17■■■□□ 2.42
NAGPA-215ENST00000569296 POLA1P09884 1462 aaPredicted RBP30.03■■■□□ 2.4
NAGPA-215ENST00000569296 CUX1P39880 1505 aa29.99■■■□□ 2.39
NAGPA-215ENST00000569296 ZNF608Q9ULD9 1512 aaPredicted RBP29.98■■■□□ 2.39
NAGPA-215ENST00000569296 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
NAGPA-215ENST00000569296 SOGA1O94964 1423 aa29.93■■■□□ 2.38
NAGPA-215ENST00000569296 FGD5Q6ZNL6 1462 aa29.93■■■□□ 2.38
NAGPA-215ENST00000569296 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
NAGPA-215ENST00000569296 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
NAGPA-215ENST00000569296 AQRO60306 1485 aaKnown RBP eCLIP29.82■■■□□ 2.363e-6■■■■□ 20.5
NAGPA-215ENST00000569296 WRNQ14191 1432 aaPredicted RBP eCLIP29.79■■■□□ 2.36
NAGPA-215ENST00000569296 WDR97A6NE52 1622 aa29.77■■■□□ 2.36
NAGPA-215ENST00000569296 OSCARQ8IYS5 282 aa29.76■■■□□ 2.35
NAGPA-215ENST00000569296 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
NAGPA-215ENST00000569296 TOP2BQ02880 1626 aa29.72■■■□□ 2.35
NAGPA-215ENST00000569296 BIVM-ERCC5R4GMW8 1640 aa29.7■■■□□ 2.34
NAGPA-215ENST00000569296 SYNJ1O43426 1573 aa29.67■■■□□ 2.34
NAGPA-215ENST00000569296 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
NAGPA-215ENST00000569296 GRIN2BQ13224 1484 aa29.6■■■□□ 2.33
NAGPA-215ENST00000569296 GAPVD1Q14C86 1478 aa29.57■■■□□ 2.32
NAGPA-215ENST00000569296 MAGI1Q96QZ7 1491 aaPredicted RBP29.54■■■□□ 2.32
NAGPA-215ENST00000569296 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
NAGPA-215ENST00000569296 ABCA5Q8WWZ7 1642 aa29.51■■■□□ 2.31
NAGPA-215ENST00000569296 FBLN2P98095 1184 aa29.49■■■□□ 2.31
NAGPA-215ENST00000569296 CHD1O14646 1710 aa29.45■■■□□ 2.31
NAGPA-215ENST00000569296 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
NAGPA-215ENST00000569296 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
NAGPA-215ENST00000569296 SYNJ2O15056 1496 aa29.42■■■□□ 2.3
NAGPA-215ENST00000569296 ERICH3Q5RHP9 1530 aa29.31■■■□□ 2.28
NAGPA-215ENST00000569296 FHAD1B1AJZ9 1412 aa29.25■■■□□ 2.27
NAGPA-215ENST00000569296 ADAMTS12P58397 1594 aa29.23■■■□□ 2.27
NAGPA-215ENST00000569296 KIF27Q86VH2 1401 aa29.2■■■□□ 2.27
NAGPA-215ENST00000569296 ARHGEF11O15085 1522 aa29.2■■■□□ 2.27
NAGPA-215ENST00000569296 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.26
NAGPA-215ENST00000569296 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.26
NAGPA-215ENST00000569296 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.26
NAGPA-215ENST00000569296 CLASP1Q7Z460 1538 aa29.2■■■□□ 2.26
NAGPA-215ENST00000569296 GRIN2AQ12879 1464 aa29.19■■■□□ 2.26
NAGPA-215ENST00000569296 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
NAGPA-215ENST00000569296 IGF1RP08069 1367 aa29.11■■■□□ 2.25
NAGPA-215ENST00000569296 NUP160Q12769 1436 aa29.09■■■□□ 2.25
NAGPA-215ENST00000569296 CEP170Q5SW79 1584 aa29.01■■■□□ 2.24
NAGPA-215ENST00000569296 CUL7Q14999 1698 aa28.99■■■□□ 2.23
NAGPA-215ENST00000569296 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
NAGPA-215ENST00000569296 ARAP1Q96P48 1450 aa28.96■■■□□ 2.23
NAGPA-215ENST00000569296 CARMIL1Q5VZK9 1371 aa28.93■■■□□ 2.22
NAGPA-215ENST00000569296 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
NAGPA-215ENST00000569296 JPH4Q96JJ6 628 aa28.82■■■□□ 2.2
NAGPA-215ENST00000569296 RUSC2Q8N2Y8 1516 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms