RNA–Protein interactions for RNA: ENST00000568868.1

SH2B1-213, Transcript of SH2B adaptor protein 1, humanhuman

TSL 2

Gene SH2B1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-213ENST00000568868 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
SH2B1-213ENST00000568868 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.66
SH2B1-213ENST00000568868 ABCC9O60706 1549 aa31.07■■■□□ 2.56
SH2B1-213ENST00000568868 DCAF8L2P0C7V8 631 aa30.03■■■□□ 2.4
SH2B1-213ENST00000568868 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
SH2B1-213ENST00000568868 NACADO15069 1562 aa29.82■■■□□ 2.36
SH2B1-213ENST00000568868 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
SH2B1-213ENST00000568868 MYO15BQ96JP2 1530 aa29.61■■■□□ 2.33
SH2B1-213ENST00000568868 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
SH2B1-213ENST00000568868 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.256e-6■■□□□ 12
SH2B1-213ENST00000568868 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
SH2B1-213ENST00000568868 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
SH2B1-213ENST00000568868 BICRAQ9NZM4 1560 aa28.9■■■□□ 2.22
SH2B1-213ENST00000568868 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
SH2B1-213ENST00000568868 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
SH2B1-213ENST00000568868 EIF4G1Q04637 1599 aaKnown RBP28.16■■■□□ 2.1
SH2B1-213ENST00000568868 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
SH2B1-213ENST00000568868 CECR2Q9BXF3 1484 aa27.92■■■□□ 2.06
SH2B1-213ENST00000568868 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
SH2B1-213ENST00000568868 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
SH2B1-213ENST00000568868 ATAD2BQ9ULI0 1458 aa27.54■■■□□ 2
SH2B1-213ENST00000568868 NCAPD3P42695 1498 aa27.53■■■□□ 2
SH2B1-213ENST00000568868 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
SH2B1-213ENST00000568868 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
SH2B1-213ENST00000568868 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
SH2B1-213ENST00000568868 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
SH2B1-213ENST00000568868 BAZ1BQ9UIG0 1483 aaKnown RBP27.32■■□□□ 1.96
SH2B1-213ENST00000568868 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
SH2B1-213ENST00000568868 WIZO95785 1651 aa27.19■■□□□ 1.94
SH2B1-213ENST00000568868 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
SH2B1-213ENST00000568868 NESP48681 1621 aa26.86■■□□□ 1.89
SH2B1-213ENST00000568868 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
SH2B1-213ENST00000568868 LAMC3Q9Y6N6 1575 aa26.78■■□□□ 1.88
SH2B1-213ENST00000568868 CADPSQ9ULU8 1353 aa26.77■■□□□ 1.88
SH2B1-213ENST00000568868 PDS5BQ9NTI5 1447 aa26.68■■□□□ 1.86
SH2B1-213ENST00000568868 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
SH2B1-213ENST00000568868 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
SH2B1-213ENST00000568868 CFTRP13569 1480 aa26.56■■□□□ 1.84
SH2B1-213ENST00000568868 KIF21AQ7Z4S6 1674 aa26.5■■□□□ 1.83
SH2B1-213ENST00000568868 CUX2O14529 1486 aa26.48■■□□□ 1.83
SH2B1-213ENST00000568868 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
SH2B1-213ENST00000568868 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
SH2B1-213ENST00000568868 THOC2Q8NI27 1593 aaKnown RBP26.38■■□□□ 1.81
SH2B1-213ENST00000568868 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
SH2B1-213ENST00000568868 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
SH2B1-213ENST00000568868 WDR62O43379 1518 aa26.22■■□□□ 1.79
SH2B1-213ENST00000568868 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.77
SH2B1-213ENST00000568868 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
SH2B1-213ENST00000568868 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
SH2B1-213ENST00000568868 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.74
SH2B1-213ENST00000568868 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
SH2B1-213ENST00000568868 CUX1P39880 1505 aa25.78■■□□□ 1.72
SH2B1-213ENST00000568868 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
SH2B1-213ENST00000568868 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
SH2B1-213ENST00000568868 SOGA1O94964 1423 aa25.74■■□□□ 1.71
SH2B1-213ENST00000568868 ZNF608Q9ULD9 1512 aaPredicted RBP25.71■■□□□ 1.71
SH2B1-213ENST00000568868 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
SH2B1-213ENST00000568868 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
SH2B1-213ENST00000568868 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
SH2B1-213ENST00000568868 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
SH2B1-213ENST00000568868 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.693e-8■■■■■ 47.6
SH2B1-213ENST00000568868 TDRD9Q8NDG6 1382 aaKnown RBP25.58■■□□□ 1.69
SH2B1-213ENST00000568868 EIF4G3O43432 1585 aaKnown RBP25.56■■□□□ 1.68
SH2B1-213ENST00000568868 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
SH2B1-213ENST00000568868 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
SH2B1-213ENST00000568868 BIVM-ERCC5R4GMW8 1640 aa25.52■■□□□ 1.68
SH2B1-213ENST00000568868 OSCARQ8IYS5 282 aa25.51■■□□□ 1.67
SH2B1-213ENST00000568868 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
SH2B1-213ENST00000568868 ABCA10Q8WWZ4 1543 aa25.46■■□□□ 1.67
SH2B1-213ENST00000568868 FBLN2P98095 1184 aa25.42■■□□□ 1.66
SH2B1-213ENST00000568868 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
SH2B1-213ENST00000568868 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
SH2B1-213ENST00000568868 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
SH2B1-213ENST00000568868 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
SH2B1-213ENST00000568868 MAGI1Q96QZ7 1491 aaPredicted RBP25.31■■□□□ 1.64
SH2B1-213ENST00000568868 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
SH2B1-213ENST00000568868 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
SH2B1-213ENST00000568868 CHD1O14646 1710 aa25.25■■□□□ 1.63
SH2B1-213ENST00000568868 SYNJ2O15056 1496 aa25.21■■□□□ 1.63
SH2B1-213ENST00000568868 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
SH2B1-213ENST00000568868 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
SH2B1-213ENST00000568868 ERICH3Q5RHP9 1530 aa25.15■■□□□ 1.62
SH2B1-213ENST00000568868 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
SH2B1-213ENST00000568868 ADAMTS12P58397 1594 aa25.06■■□□□ 1.6
SH2B1-213ENST00000568868 IGF1RP08069 1367 aa25.05■■□□□ 1.6
SH2B1-213ENST00000568868 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
SH2B1-213ENST00000568868 CLASP1Q7Z460 1538 aa24.96■■□□□ 1.59
SH2B1-213ENST00000568868 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
SH2B1-213ENST00000568868 RIMBP3CA6NJZ7 1639 aa24.95■■□□□ 1.58
SH2B1-213ENST00000568868 RIMBP3BA6NNM3 1639 aa24.95■■□□□ 1.58
SH2B1-213ENST00000568868 RIMBP3Q9UFD9 1639 aa24.95■■□□□ 1.58
SH2B1-213ENST00000568868 CARMIL1Q5VZK9 1371 aa24.93■■□□□ 1.58
SH2B1-213ENST00000568868 NUP160Q12769 1436 aa24.92■■□□□ 1.58
SH2B1-213ENST00000568868 CUL7Q14999 1698 aa24.91■■□□□ 1.58
SH2B1-213ENST00000568868 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
SH2B1-213ENST00000568868 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
SH2B1-213ENST00000568868 CYB5RLQ6IPT4 315 aa24.88■■□□□ 1.57
SH2B1-213ENST00000568868 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
SH2B1-213ENST00000568868 JPH4Q96JJ6 628 aa24.8■■□□□ 1.56
SH2B1-213ENST00000568868 ARAP1Q96P48 1450 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 1219 ms