RNA–Protein interactions for RNA: ENST00000568839.5

E2F4-212, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-212ENST00000568839 NISCHQ9Y2I1 1504 aa28.15■■■□□ 2.1
E2F4-212ENST00000568839 CCDC180Q9P1Z9 1646 aa25.31■■□□□ 1.64
E2F4-212ENST00000568839 ABCC9O60706 1549 aa25.21■■□□□ 1.63
E2F4-212ENST00000568839 RB1CC1Q8TDY2 1594 aa24.08■■□□□ 1.45
E2F4-212ENST00000568839 NACADO15069 1562 aa23.91■■□□□ 1.42
E2F4-212ENST00000568839 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
E2F4-212ENST00000568839 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.36
E2F4-212ENST00000568839 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
E2F4-212ENST00000568839 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
E2F4-212ENST00000568839 PABPN1Q86U42 306 aaKnown RBP eCLIP23.46■■□□□ 1.35
E2F4-212ENST00000568839 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
E2F4-212ENST00000568839 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
E2F4-212ENST00000568839 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
E2F4-212ENST00000568839 SHROOM4Q9ULL8 1493 aa23.06■■□□□ 1.28
E2F4-212ENST00000568839 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
E2F4-212ENST00000568839 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
E2F4-212ENST00000568839 EIF4G1Q04637 1599 aaKnown RBP22.75■■□□□ 1.23
E2F4-212ENST00000568839 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
E2F4-212ENST00000568839 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
E2F4-212ENST00000568839 SMARCA2P51531 1590 aa21.97■■□□□ 1.11
E2F4-212ENST00000568839 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
E2F4-212ENST00000568839 ATAD2BQ9ULI0 1458 aa21.96■■□□□ 1.11
E2F4-212ENST00000568839 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
E2F4-212ENST00000568839 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
E2F4-212ENST00000568839 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
E2F4-212ENST00000568839 BAZ1BQ9UIG0 1483 aaKnown RBP21.8■■□□□ 1.08
E2F4-212ENST00000568839 CUX2O14529 1486 aa21.76■■□□□ 1.07
E2F4-212ENST00000568839 PEG3Q9GZU2 1588 aa21.74■■□□□ 1.07
E2F4-212ENST00000568839 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
E2F4-212ENST00000568839 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
E2F4-212ENST00000568839 NESP48681 1621 aa21.63■■□□□ 1.05
E2F4-212ENST00000568839 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
E2F4-212ENST00000568839 PDS5BQ9NTI5 1447 aa21.46■■□□□ 1.03
E2F4-212ENST00000568839 WIZO95785 1651 aa21.44■■□□□ 1.02
E2F4-212ENST00000568839 THOC2Q8NI27 1593 aaKnown RBP21.43■■□□□ 1.02
E2F4-212ENST00000568839 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
E2F4-212ENST00000568839 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
E2F4-212ENST00000568839 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
E2F4-212ENST00000568839 RSF1Q96T23 1441 aaPredicted RBP21.23■□□□□ 0.99
E2F4-212ENST00000568839 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
E2F4-212ENST00000568839 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
E2F4-212ENST00000568839 WDR62O43379 1518 aa21.17■□□□□ 0.98
E2F4-212ENST00000568839 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
E2F4-212ENST00000568839 CFTRP13569 1480 aa21.13■□□□□ 0.97
E2F4-212ENST00000568839 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
E2F4-212ENST00000568839 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
E2F4-212ENST00000568839 URB2Q14146 1524 aaKnown RBP20.91■□□□□ 0.94
E2F4-212ENST00000568839 OSCARQ8IYS5 282 aa20.81■□□□□ 0.92
E2F4-212ENST00000568839 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
E2F4-212ENST00000568839 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
E2F4-212ENST00000568839 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
E2F4-212ENST00000568839 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
E2F4-212ENST00000568839 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
E2F4-212ENST00000568839 ZNF608Q9ULD9 1512 aaPredicted RBP20.64■□□□□ 0.9
E2F4-212ENST00000568839 EIF4G3O43432 1585 aaKnown RBP20.59■□□□□ 0.89
E2F4-212ENST00000568839 TARBP1Q13395 1621 aaKnown RBP20.53■□□□□ 0.88
E2F4-212ENST00000568839 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
E2F4-212ENST00000568839 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.872e-7■■■■■ 28.9
E2F4-212ENST00000568839 RIMBP3CA6NJZ7 1639 aa20.47■□□□□ 0.87
E2F4-212ENST00000568839 RIMBP3BA6NNM3 1639 aa20.47■□□□□ 0.87
E2F4-212ENST00000568839 RIMBP3Q9UFD9 1639 aa20.47■□□□□ 0.87
E2F4-212ENST00000568839 SOGA1O94964 1423 aa20.45■□□□□ 0.86
E2F4-212ENST00000568839 CHD1O14646 1710 aa20.45■□□□□ 0.86
E2F4-212ENST00000568839 FBLN2P98095 1184 aa20.44■□□□□ 0.86
E2F4-212ENST00000568839 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
E2F4-212ENST00000568839 ARHGEF11O15085 1522 aa20.41■□□□□ 0.86
E2F4-212ENST00000568839 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
E2F4-212ENST00000568839 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
E2F4-212ENST00000568839 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
E2F4-212ENST00000568839 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
E2F4-212ENST00000568839 CUX1P39880 1505 aa20.35■□□□□ 0.85
E2F4-212ENST00000568839 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
E2F4-212ENST00000568839 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
E2F4-212ENST00000568839 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
E2F4-212ENST00000568839 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
E2F4-212ENST00000568839 MAGI1Q96QZ7 1491 aaPredicted RBP20.28■□□□□ 0.84
E2F4-212ENST00000568839 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
E2F4-212ENST00000568839 PBRM1Q86U86 1689 aa20.22■□□□□ 0.83
E2F4-212ENST00000568839 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
E2F4-212ENST00000568839 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
E2F4-212ENST00000568839 ABCA10Q8WWZ4 1543 aa20.17■□□□□ 0.82
E2F4-212ENST00000568839 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
E2F4-212ENST00000568839 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
E2F4-212ENST00000568839 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
E2F4-212ENST00000568839 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
E2F4-212ENST00000568839 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
E2F4-212ENST00000568839 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
E2F4-212ENST00000568839 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
E2F4-212ENST00000568839 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
E2F4-212ENST00000568839 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
E2F4-212ENST00000568839 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
E2F4-212ENST00000568839 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
E2F4-212ENST00000568839 NUP160Q12769 1436 aa19.9■□□□□ 0.78
E2F4-212ENST00000568839 CEP170Q5SW79 1584 aa19.89■□□□□ 0.77
E2F4-212ENST00000568839 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
E2F4-212ENST00000568839 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
E2F4-212ENST00000568839 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
E2F4-212ENST00000568839 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
E2F4-212ENST00000568839 KIF27Q86VH2 1401 aa19.73■□□□□ 0.75
E2F4-212ENST00000568839 CUL7Q14999 1698 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms