RNA–Protein interactions for RNA: ENST00000568750.1

TNRC6A-213, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 609 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-213ENST00000568750 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
TNRC6A-213ENST00000568750 ABCC9O60706 1549 aa22.72■■□□□ 1.23
TNRC6A-213ENST00000568750 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
TNRC6A-213ENST00000568750 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
TNRC6A-213ENST00000568750 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
TNRC6A-213ENST00000568750 NACADO15069 1562 aa21.42■■□□□ 1.02
TNRC6A-213ENST00000568750 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
TNRC6A-213ENST00000568750 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
TNRC6A-213ENST00000568750 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
TNRC6A-213ENST00000568750 ZCCHC6Q5VYS8 1495 aaKnown RBP21.05■□□□□ 0.96
TNRC6A-213ENST00000568750 UNC13AQ9UPW8 1703 aa20.93■□□□□ 0.94
TNRC6A-213ENST00000568750 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.93
TNRC6A-213ENST00000568750 DCAF1Q9Y4B6 1507 aa20.88■□□□□ 0.93
TNRC6A-213ENST00000568750 SCRIBQ14160 1630 aa20.77■□□□□ 0.92
TNRC6A-213ENST00000568750 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
TNRC6A-213ENST00000568750 CECR2Q9BXF3 1484 aa20.43■□□□□ 0.86
TNRC6A-213ENST00000568750 CC2D2AQ9P2K1 1620 aa20.42■□□□□ 0.86
TNRC6A-213ENST00000568750 EIF4G1Q04637 1599 aaKnown RBP20.41■□□□□ 0.86
TNRC6A-213ENST00000568750 NCAPD3P42695 1498 aa19.8■□□□□ 0.76
TNRC6A-213ENST00000568750 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
TNRC6A-213ENST00000568750 SMARCA4P51532 1647 aa19.75■□□□□ 0.75
TNRC6A-213ENST00000568750 SMARCA2P51531 1590 aa19.7■□□□□ 0.74
TNRC6A-213ENST00000568750 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
TNRC6A-213ENST00000568750 BAZ1BQ9UIG0 1483 aaKnown RBP19.63■□□□□ 0.73
TNRC6A-213ENST00000568750 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
TNRC6A-213ENST00000568750 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
TNRC6A-213ENST00000568750 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
TNRC6A-213ENST00000568750 NESP48681 1621 aa19.53■□□□□ 0.72
TNRC6A-213ENST00000568750 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
TNRC6A-213ENST00000568750 CUX2O14529 1486 aa19.42■□□□□ 0.7
TNRC6A-213ENST00000568750 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
TNRC6A-213ENST00000568750 WIZO95785 1651 aa19.34■□□□□ 0.69
TNRC6A-213ENST00000568750 LAMC3Q9Y6N6 1575 aa19.3■□□□□ 0.68
TNRC6A-213ENST00000568750 PDS5BQ9NTI5 1447 aa19.28■□□□□ 0.68
TNRC6A-213ENST00000568750 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
TNRC6A-213ENST00000568750 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
TNRC6A-213ENST00000568750 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
TNRC6A-213ENST00000568750 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
TNRC6A-213ENST00000568750 TOP2AP11388 1531 aaKnown RBP19.1■□□□□ 0.65
TNRC6A-213ENST00000568750 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
TNRC6A-213ENST00000568750 FANCD2Q9BXW9 1451 aa19.05■□□□□ 0.64
TNRC6A-213ENST00000568750 CEP164Q9UPV0 1460 aa19.04■□□□□ 0.64
TNRC6A-213ENST00000568750 CFTRP13569 1480 aa19.03■□□□□ 0.64
TNRC6A-213ENST00000568750 WDR62O43379 1518 aa18.98■□□□□ 0.63
TNRC6A-213ENST00000568750 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
TNRC6A-213ENST00000568750 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
TNRC6A-213ENST00000568750 TRIM41Q8WV44 630 aa18.72■□□□□ 0.59
TNRC6A-213ENST00000568750 SUPT5HO00267 1087 aaKnown RBP18.7■□□□□ 0.58
TNRC6A-213ENST00000568750 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
TNRC6A-213ENST00000568750 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
TNRC6A-213ENST00000568750 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
TNRC6A-213ENST00000568750 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
TNRC6A-213ENST00000568750 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
TNRC6A-213ENST00000568750 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
TNRC6A-213ENST00000568750 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
TNRC6A-213ENST00000568750 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■■□□□ 12
TNRC6A-213ENST00000568750 FBLN2P98095 1184 aa18.5■□□□□ 0.55
TNRC6A-213ENST00000568750 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
TNRC6A-213ENST00000568750 RAD54L2Q9Y4B4 1467 aa18.5■□□□□ 0.55
TNRC6A-213ENST00000568750 SOGA1O94964 1423 aa18.48■□□□□ 0.55
TNRC6A-213ENST00000568750 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
TNRC6A-213ENST00000568750 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
TNRC6A-213ENST00000568750 TARBP1Q13395 1621 aaKnown RBP18.42■□□□□ 0.54
TNRC6A-213ENST00000568750 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
TNRC6A-213ENST00000568750 CUX1P39880 1505 aa18.39■□□□□ 0.54
TNRC6A-213ENST00000568750 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
TNRC6A-213ENST00000568750 SNAPC4Q5SXM2 1469 aa18.31■□□□□ 0.52
TNRC6A-213ENST00000568750 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
TNRC6A-213ENST00000568750 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
TNRC6A-213ENST00000568750 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
TNRC6A-213ENST00000568750 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
TNRC6A-213ENST00000568750 CYB5RLQ6IPT4 315 aa18.3■□□□□ 0.52
TNRC6A-213ENST00000568750 CHD1O14646 1710 aa18.26■□□□□ 0.51
TNRC6A-213ENST00000568750 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
TNRC6A-213ENST00000568750 GAPVD1Q14C86 1478 aa18.21■□□□□ 0.51
TNRC6A-213ENST00000568750 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
TNRC6A-213ENST00000568750 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
TNRC6A-213ENST00000568750 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
TNRC6A-213ENST00000568750 ABCA10Q8WWZ4 1543 aa18.18■□□□□ 0.5
TNRC6A-213ENST00000568750 SYNJ2O15056 1496 aa18.16■□□□□ 0.5
TNRC6A-213ENST00000568750 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
TNRC6A-213ENST00000568750 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
TNRC6A-213ENST00000568750 TRHP20396 242 aaPredicted RBP18.1■□□□□ 0.49
TNRC6A-213ENST00000568750 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
TNRC6A-213ENST00000568750 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
TNRC6A-213ENST00000568750 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
TNRC6A-213ENST00000568750 CLASP1Q7Z460 1538 aa18.08■□□□□ 0.49
TNRC6A-213ENST00000568750 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
TNRC6A-213ENST00000568750 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
TNRC6A-213ENST00000568750 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
TNRC6A-213ENST00000568750 ADAMTS12P58397 1594 aa17.97■□□□□ 0.47
TNRC6A-213ENST00000568750 ERICH3Q5RHP9 1530 aa17.93■□□□□ 0.46
TNRC6A-213ENST00000568750 NUP160Q12769 1436 aa17.92■□□□□ 0.46
TNRC6A-213ENST00000568750 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
TNRC6A-213ENST00000568750 ERCC6L2Q5T890 1561 aa17.88■□□□□ 0.45
TNRC6A-213ENST00000568750 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
TNRC6A-213ENST00000568750 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
TNRC6A-213ENST00000568750 PRG4Q92954 1404 aaPredicted RBP17.82■□□□□ 0.44
TNRC6A-213ENST00000568750 IGF1RP08069 1367 aa17.82■□□□□ 0.44
TNRC6A-213ENST00000568750 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms