RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 NISCHQ9Y2I1 1504 aa37.64■■■■□ 3.62
CDH16-208ENST00000568698 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
CDH16-208ENST00000568698 ABCC9O60706 1549 aa31.94■■■□□ 2.7
CDH16-208ENST00000568698 ZCCHC6Q5VYS8 1495 aaKnown RBP31.49■■■□□ 2.63
CDH16-208ENST00000568698 DCAF8L2P0C7V8 631 aa31.16■■■□□ 2.58
CDH16-208ENST00000568698 DCAF1Q9Y4B6 1507 aa31.16■■■□□ 2.58
CDH16-208ENST00000568698 MYO15BQ96JP2 1530 aa31.07■■■□□ 2.56
CDH16-208ENST00000568698 NACADO15069 1562 aa31.06■■■□□ 2.56
CDH16-208ENST00000568698 RB1CC1Q8TDY2 1594 aa30.94■■■□□ 2.54
CDH16-208ENST00000568698 UNC13AQ9UPW8 1703 aa30.36■■■□□ 2.45
CDH16-208ENST00000568698 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
CDH16-208ENST00000568698 SHROOM4Q9ULL8 1493 aa30.09■■■□□ 2.41
CDH16-208ENST00000568698 BICRAQ9NZM4 1560 aa30.08■■■□□ 2.41
CDH16-208ENST00000568698 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.38
CDH16-208ENST00000568698 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
CDH16-208ENST00000568698 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.26
CDH16-208ENST00000568698 BAZ1AQ9NRL2 1556 aaPredicted RBP29.11■■■□□ 2.25
CDH16-208ENST00000568698 SMARCA4P51532 1647 aa29.09■■■□□ 2.25
CDH16-208ENST00000568698 MROH2BQ7Z745 1585 aa29.05■■■□□ 2.24
CDH16-208ENST00000568698 CC2D2AQ9P2K1 1620 aa28.94■■■□□ 2.22
CDH16-208ENST00000568698 RSF1Q96T23 1441 aaPredicted RBP28.91■■■□□ 2.22
CDH16-208ENST00000568698 DNAJC5BQ9UF47 199 aa28.86■■■□□ 2.21
CDH16-208ENST00000568698 PEG3Q9GZU2 1588 aa28.8■■■□□ 2.2
CDH16-208ENST00000568698 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
CDH16-208ENST00000568698 WIZO95785 1651 aa28.78■■■□□ 2.2
CDH16-208ENST00000568698 SMARCA2P51531 1590 aa28.74■■■□□ 2.19
CDH16-208ENST00000568698 NCAPD3P42695 1498 aa28.67■■■□□ 2.18
CDH16-208ENST00000568698 HMGXB3Q12766 1538 aa28.58■■■□□ 2.17
CDH16-208ENST00000568698 SUPT5HO00267 1087 aaKnown RBP28.57■■■□□ 2.16
CDH16-208ENST00000568698 BAZ1BQ9UIG0 1483 aaKnown RBP28.55■■■□□ 2.16
CDH16-208ENST00000568698 TOP2AP11388 1531 aaKnown RBP28.46■■■□□ 2.15
CDH16-208ENST00000568698 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
CDH16-208ENST00000568698 CADPSQ9ULU8 1353 aa27.85■■■□□ 2.05
CDH16-208ENST00000568698 NESP48681 1621 aa27.85■■■□□ 2.05
CDH16-208ENST00000568698 CFTRP13569 1480 aa27.83■■■□□ 2.05
CDH16-208ENST00000568698 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
CDH16-208ENST00000568698 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
CDH16-208ENST00000568698 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
CDH16-208ENST00000568698 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
CDH16-208ENST00000568698 KIF21AQ7Z4S6 1674 aa27.54■■■□□ 2
CDH16-208ENST00000568698 ERCC6Q03468 1493 aa27.43■■□□□ 1.98
CDH16-208ENST00000568698 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
CDH16-208ENST00000568698 CHIC1Q5VXU3 224 aa27.39■■□□□ 1.98
CDH16-208ENST00000568698 ABCC8Q09428 1581 aa27.31■■□□□ 1.96
CDH16-208ENST00000568698 THOC2Q8NI27 1593 aaKnown RBP27.29■■□□□ 1.96
CDH16-208ENST00000568698 MRC2Q9UBG0 1479 aa27.27■■□□□ 1.96
CDH16-208ENST00000568698 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
CDH16-208ENST00000568698 CUX1P39880 1505 aa27.21■■□□□ 1.95
CDH16-208ENST00000568698 WRNQ14191 1432 aaPredicted RBP eCLIP27.2■■□□□ 1.95
CDH16-208ENST00000568698 WDR62O43379 1518 aa27.19■■□□□ 1.94
CDH16-208ENST00000568698 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
CDH16-208ENST00000568698 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
CDH16-208ENST00000568698 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
CDH16-208ENST00000568698 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
CDH16-208ENST00000568698 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
CDH16-208ENST00000568698 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
CDH16-208ENST00000568698 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
CDH16-208ENST00000568698 CUX2O14529 1486 aa26.96■■□□□ 1.91
CDH16-208ENST00000568698 TRIM41Q8WV44 630 aa26.93■■□□□ 1.9
CDH16-208ENST00000568698 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
CDH16-208ENST00000568698 TARBP1Q13395 1621 aaKnown RBP26.87■■□□□ 1.89
CDH16-208ENST00000568698 SOGA1O94964 1423 aa26.86■■□□□ 1.89
CDH16-208ENST00000568698 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
CDH16-208ENST00000568698 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
CDH16-208ENST00000568698 ABCA10Q8WWZ4 1543 aa26.77■■□□□ 1.88
CDH16-208ENST00000568698 ZNF608Q9ULD9 1512 aaPredicted RBP26.73■■□□□ 1.87
CDH16-208ENST00000568698 TDRD9Q8NDG6 1382 aaKnown RBP26.66■■□□□ 1.86
CDH16-208ENST00000568698 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
CDH16-208ENST00000568698 EIF4G3O43432 1585 aaKnown RBP26.63■■□□□ 1.85
CDH16-208ENST00000568698 AQRO60306 1485 aaKnown RBP eCLIP26.63■■□□□ 1.85
CDH16-208ENST00000568698 RUSC2Q8N2Y8 1516 aa26.6■■□□□ 1.85
CDH16-208ENST00000568698 KIF27Q86VH2 1401 aa26.57■■□□□ 1.84
CDH16-208ENST00000568698 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
CDH16-208ENST00000568698 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
CDH16-208ENST00000568698 GRIN2BQ13224 1484 aa26.47■■□□□ 1.83
CDH16-208ENST00000568698 HRCP23327 699 aa26.44■■□□□ 1.82
CDH16-208ENST00000568698 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
CDH16-208ENST00000568698 IGF1RP08069 1367 aa26.44■■□□□ 1.82
CDH16-208ENST00000568698 EEA1Q15075 1411 aa26.43■■□□□ 1.82
CDH16-208ENST00000568698 FAM9AQ8IZU1 332 aaPredicted RBP26.39■■□□□ 1.81
CDH16-208ENST00000568698 LOC105371045A0A1W2PR82 267 aa26.38■■□□□ 1.81
CDH16-208ENST00000568698 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
CDH16-208ENST00000568698 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
CDH16-208ENST00000568698 CSRNP3Q8WYN3 585 aa26.33■■□□□ 1.81
CDH16-208ENST00000568698 ADAMTS12P58397 1594 aa26.32■■□□□ 1.8
CDH16-208ENST00000568698 PCGF6Q9BYE7 350 aa26.32■■□□□ 1.8
CDH16-208ENST00000568698 CUL7Q14999 1698 aa26.31■■□□□ 1.8
CDH16-208ENST00000568698 FHAD1B1AJZ9 1412 aa26.26■■□□□ 1.79
CDH16-208ENST00000568698 CARMIL1Q5VZK9 1371 aa26.26■■□□□ 1.79
CDH16-208ENST00000568698 PRXQ9BXM0 1461 aa26.26■■□□□ 1.79
CDH16-208ENST00000568698 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
CDH16-208ENST00000568698 CHD1O14646 1710 aa26.19■■□□□ 1.78
CDH16-208ENST00000568698 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
CDH16-208ENST00000568698 KIF21BO75037 1637 aa26.16■■□□□ 1.78
CDH16-208ENST00000568698 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
CDH16-208ENST00000568698 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.78
CDH16-208ENST00000568698 FBLN2P98095 1184 aa26.14■■□□□ 1.77
CDH16-208ENST00000568698 TRIM26Q12899 539 aaPredicted RBP26.07■■□□□ 1.76
CDH16-208ENST00000568698 CEP170Q5SW79 1584 aa26.03■■□□□ 1.76
CDH16-208ENST00000568698 GOLGA3Q08378 1498 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms