RNA–Protein interactions for RNA: ENST00000568663.5

LYRM1-209, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LYRM1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-209ENST00000568663 NISCHQ9Y2I1 1504 aa42.1■■■■■ 4.33
LYRM1-209ENST00000568663 ABCC9O60706 1549 aa37.97■■■■□ 3.67
LYRM1-209ENST00000568663 CCDC180Q9P1Z9 1646 aa37.7■■■■□ 3.63
LYRM1-209ENST00000568663 RB1CC1Q8TDY2 1594 aa36.04■■■■□ 3.36
LYRM1-209ENST00000568663 DNAJC5BQ9UF47 199 aa35.96■■■■□ 3.35
LYRM1-209ENST00000568663 NACADO15069 1562 aa35.81■■■■□ 3.32
LYRM1-209ENST00000568663 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
LYRM1-209ENST00000568663 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
LYRM1-209ENST00000568663 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.25
LYRM1-209ENST00000568663 UNC13AQ9UPW8 1703 aa35.12■■■■□ 3.21
LYRM1-209ENST00000568663 BICRAQ9NZM4 1560 aa35.03■■■■□ 3.2
LYRM1-209ENST00000568663 ZCCHC6Q5VYS8 1495 aaKnown RBP34.8■■■■□ 3.16
LYRM1-209ENST00000568663 DCAF1Q9Y4B6 1507 aa34.79■■■■□ 3.16
LYRM1-209ENST00000568663 SHROOM4Q9ULL8 1493 aa34.55■■■■□ 3.12
LYRM1-209ENST00000568663 SCRIBQ14160 1630 aa34.33■■■■□ 3.09
LYRM1-209ENST00000568663 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.08
LYRM1-209ENST00000568663 CECR2Q9BXF3 1484 aa34.25■■■■□ 3.07
LYRM1-209ENST00000568663 EIF4G1Q04637 1599 aaKnown RBP34.16■■■■□ 3.06
LYRM1-209ENST00000568663 DNAJC5Q9H3Z4 198 aa33.17■■■□□ 2.9
LYRM1-209ENST00000568663 NCAPD3P42695 1498 aa33.15■■■□□ 2.9
LYRM1-209ENST00000568663 ATAD2BQ9ULI0 1458 aa32.98■■■□□ 2.87
LYRM1-209ENST00000568663 CUX2O14529 1486 aa32.82■■■□□ 2.84
LYRM1-209ENST00000568663 SMARCA2P51531 1590 aa32.8■■■□□ 2.84
LYRM1-209ENST00000568663 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
LYRM1-209ENST00000568663 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
LYRM1-209ENST00000568663 HMGXB3Q12766 1538 aa32.76■■■□□ 2.83
LYRM1-209ENST00000568663 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
LYRM1-209ENST00000568663 NESP48681 1621 aa32.58■■■□□ 2.81
LYRM1-209ENST00000568663 BAZ1BQ9UIG0 1483 aaKnown RBP32.57■■■□□ 2.8
LYRM1-209ENST00000568663 PEG3Q9GZU2 1588 aa32.54■■■□□ 2.8
LYRM1-209ENST00000568663 MROH2BQ7Z745 1585 aa32.41■■■□□ 2.78
LYRM1-209ENST00000568663 LAMC3Q9Y6N6 1575 aa32.3■■■□□ 2.76
LYRM1-209ENST00000568663 PDS5BQ9NTI5 1447 aa32.21■■■□□ 2.75
LYRM1-209ENST00000568663 THOC2Q8NI27 1593 aaKnown RBP32.19■■■□□ 2.74
LYRM1-209ENST00000568663 CADPSQ9ULU8 1353 aa32.14■■■□□ 2.74
LYRM1-209ENST00000568663 KIF21AQ7Z4S6 1674 aa32.02■■■□□ 2.72
LYRM1-209ENST00000568663 WIZO95785 1651 aa31.94■■■□□ 2.7
LYRM1-209ENST00000568663 MRC2Q9UBG0 1479 aa31.86■■■□□ 2.69
LYRM1-209ENST00000568663 WDR62O43379 1518 aa31.78■■■□□ 2.68
LYRM1-209ENST00000568663 RSF1Q96T23 1441 aaPredicted RBP31.75■■■□□ 2.67
LYRM1-209ENST00000568663 CFTRP13569 1480 aa31.7■■■□□ 2.66
LYRM1-209ENST00000568663 CEP164Q9UPV0 1460 aa31.69■■■□□ 2.66
LYRM1-209ENST00000568663 FANCD2Q9BXW9 1451 aa31.68■■■□□ 2.66
LYRM1-209ENST00000568663 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
LYRM1-209ENST00000568663 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
LYRM1-209ENST00000568663 OSCARQ8IYS5 282 aa31.44■■■□□ 2.62
LYRM1-209ENST00000568663 URB2Q14146 1524 aaKnown RBP31.42■■■□□ 2.62
LYRM1-209ENST00000568663 CCDC88BA6NC98 1476 aa31.29■■■□□ 2.6
LYRM1-209ENST00000568663 PRDM2Q13029 1718 aa31.12■■■□□ 2.57
LYRM1-209ENST00000568663 IFT140Q96RY7 1462 aa31.11■■■□□ 2.57
LYRM1-209ENST00000568663 ZNF608Q9ULD9 1512 aaPredicted RBP31.07■■■□□ 2.56
LYRM1-209ENST00000568663 TOPBP1Q92547 1522 aa31.05■■■□□ 2.56
LYRM1-209ENST00000568663 ABCC8Q09428 1581 aa31.04■■■□□ 2.56
LYRM1-209ENST00000568663 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
LYRM1-209ENST00000568663 RIMBP3CA6NJZ7 1639 aa30.82■■■□□ 2.52
LYRM1-209ENST00000568663 RIMBP3BA6NNM3 1639 aa30.82■■■□□ 2.52
LYRM1-209ENST00000568663 RIMBP3Q9UFD9 1639 aa30.82■■■□□ 2.52
LYRM1-209ENST00000568663 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.52
LYRM1-209ENST00000568663 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.52
LYRM1-209ENST00000568663 EIF4G3O43432 1585 aaKnown RBP30.76■■■□□ 2.52
LYRM1-209ENST00000568663 ARHGEF11O15085 1522 aa30.76■■■□□ 2.51
LYRM1-209ENST00000568663 POLA1P09884 1462 aaPredicted RBP30.73■■■□□ 2.51
LYRM1-209ENST00000568663 CYB5RLQ6IPT4 315 aa30.68■■■□□ 2.5
LYRM1-209ENST00000568663 SOGA1O94964 1423 aa30.65■■■□□ 2.5
LYRM1-209ENST00000568663 FBLN2P98095 1184 aa30.65■■■□□ 2.5
LYRM1-209ENST00000568663 RAD54L2Q9Y4B4 1467 aa30.63■■■□□ 2.49
LYRM1-209ENST00000568663 TDRD9Q8NDG6 1382 aaKnown RBP30.62■■■□□ 2.49
LYRM1-209ENST00000568663 CHD1O14646 1710 aa30.53■■■□□ 2.48
LYRM1-209ENST00000568663 FGD5Q6ZNL6 1462 aa30.49■■■□□ 2.47
LYRM1-209ENST00000568663 ARAP1Q96P48 1450 aa30.45■■■□□ 2.47
LYRM1-209ENST00000568663 CUX1P39880 1505 aa30.44■■■□□ 2.46
LYRM1-209ENST00000568663 CHMP7Q8WUX9 453 aaPredicted RBP30.44■■■□□ 2.46
LYRM1-209ENST00000568663 WDR97A6NE52 1622 aa30.43■■■□□ 2.46
LYRM1-209ENST00000568663 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
LYRM1-209ENST00000568663 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
LYRM1-209ENST00000568663 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
LYRM1-209ENST00000568663 TRHP20396 242 aaPredicted RBP30.33■■■□□ 2.45
LYRM1-209ENST00000568663 CLASP1Q7Z460 1538 aa30.29■■■□□ 2.44
LYRM1-209ENST00000568663 SYNJ2O15056 1496 aa30.27■■■□□ 2.44
LYRM1-209ENST00000568663 GAPVD1Q14C86 1478 aa30.24■■■□□ 2.43
LYRM1-209ENST00000568663 SYNJ1O43426 1573 aa30.24■■■□□ 2.43
LYRM1-209ENST00000568663 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
LYRM1-209ENST00000568663 ABCA10Q8WWZ4 1543 aa30.18■■■□□ 2.42
LYRM1-209ENST00000568663 WRNQ14191 1432 aaPredicted RBP eCLIP30.05■■■□□ 2.4
LYRM1-209ENST00000568663 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
LYRM1-209ENST00000568663 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
LYRM1-209ENST00000568663 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
LYRM1-209ENST00000568663 NUP160Q12769 1436 aa29.9■■■□□ 2.38
LYRM1-209ENST00000568663 TOP2BQ02880 1626 aa29.89■■■□□ 2.37
LYRM1-209ENST00000568663 FHAD1B1AJZ9 1412 aa29.87■■■□□ 2.37
LYRM1-209ENST00000568663 BIVM-ERCC5R4GMW8 1640 aa29.84■■■□□ 2.37
LYRM1-209ENST00000568663 ADAMTS12P58397 1594 aa29.81■■■□□ 2.36
LYRM1-209ENST00000568663 ERCC6L2Q5T890 1561 aa29.81■■■□□ 2.36
LYRM1-209ENST00000568663 CEP170Q5SW79 1584 aa29.79■■■□□ 2.36
LYRM1-209ENST00000568663 ERICH3Q5RHP9 1530 aa29.77■■■□□ 2.36
LYRM1-209ENST00000568663 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
LYRM1-209ENST00000568663 SHROOM2Q13796 1616 aa29.69■■■□□ 2.34
LYRM1-209ENST00000568663 PRG4Q92954 1404 aaPredicted RBP29.62■■■□□ 2.33
LYRM1-209ENST00000568663 AEBP2Q6ZN18 517 aaPredicted RBP29.57■■■□□ 2.32
LYRM1-209ENST00000568663 IGF1RP08069 1367 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms