RNA–Protein interactions for RNA: ENST00000568542.5

MLST8-231, Transcript of MTOR associated protein, LST8 homolog, human

TSL 1 (best)

Gene MLST8, Length 1,865 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MLST8-231	ENST00000568542	NISCH	Q9Y2I1	1504 aa		38.97	■■■■□ 3.83
MLST8-231	ENST00000568542	CCDC180	Q9P1Z9	1646 aa		34.37	■■■■□ 3.09
MLST8-231	ENST00000568542	ABCC9	O60706	1549 aa		33.18	■■■□□ 2.9
MLST8-231	ENST00000568542	ZCCHC6	Q5VYS8	1495 aa	Known RBP	32.58	■■■□□ 2.81
MLST8-231	ENST00000568542	DCAF8L2	P0C7V8	631 aa		32.37	■■■□□ 2.77
MLST8-231	ENST00000568542	DCAF1	Q9Y4B6	1507 aa		32.21	■■■□□ 2.75
MLST8-231	ENST00000568542	NACAD	O15069	1562 aa		32.17	■■■□□ 2.74
MLST8-231	ENST00000568542	MYO15B	Q96JP2	1530 aa		32.12	■■■□□ 2.73
MLST8-231	ENST00000568542	RB1CC1	Q8TDY2	1594 aa		32.09	■■■□□ 2.73
MLST8-231	ENST00000568542	SCRIB	Q14160	1630 aa		31.49	■■■□□ 2.63
MLST8-231	ENST00000568542	UNC13A	Q9UPW8	1703 aa		31.47	■■■□□ 2.63
MLST8-231	ENST00000568542	SHROOM4	Q9ULL8	1493 aa		31.19	■■■□□ 2.58
MLST8-231	ENST00000568542	BICRA	Q9NZM4	1560 aa		31.17	■■■□□ 2.58
MLST8-231	ENST00000568542	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.12	■■■□□ 2.57
MLST8-231	ENST00000568542	CECR2	Q9BXF3	1484 aa		30.35	■■■□□ 2.45
MLST8-231	ENST00000568542	EIF4G1	Q04637	1599 aa	Known RBP	30.27	■■■□□ 2.44
MLST8-231	ENST00000568542	SUPT5H	O00267	1087 aa	Known RBP	30.25	■■■□□ 2.43
MLST8-231	ENST00000568542	SMARCA4	P51532	1647 aa		30.13	■■■□□ 2.41
MLST8-231	ENST00000568542	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.13	■■■□□ 2.41
MLST8-231	ENST00000568542	MROH2B	Q7Z745	1585 aa		30.08	■■■□□ 2.41
MLST8-231	ENST00000568542	CC2D2A	Q9P2K1	1620 aa		30.02	■■■□□ 2.4
MLST8-231	ENST00000568542	DNAJC5B	Q9UF47	199 aa		29.99	■■■□□ 2.39
MLST8-231	ENST00000568542	RSF1	Q96T23	1441 aa	Predicted RBP	29.91	■■■□□ 2.38
MLST8-231	ENST00000568542	ATAD2B	Q9ULI0	1458 aa		29.82	■■■□□ 2.36
MLST8-231	ENST00000568542	WIZ	O95785	1651 aa		29.8	■■■□□ 2.36
MLST8-231	ENST00000568542	PEG3	Q9GZU2	1588 aa		29.79	■■■□□ 2.36
MLST8-231	ENST00000568542	SMARCA2	P51531	1590 aa		29.77	■■■□□ 2.36
MLST8-231	ENST00000568542	NCAPD3	P42695	1498 aa		29.68	■■■□□ 2.34
MLST8-231	ENST00000568542	HMGXB3	Q12766	1538 aa		29.59	■■■□□ 2.33
MLST8-231	ENST00000568542	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.59	■■■□□ 2.33
MLST8-231	ENST00000568542	CHIC1	Q5VXU3	224 aa		29.53	■■■□□ 2.32
MLST8-231	ENST00000568542	TOP2A	P11388	1531 aa	Known RBP	29.47	■■■□□ 2.31
MLST8-231	ENST00000568542	CCDC88B	A6NC98	1476 aa		29.14	■■■□□ 2.25
MLST8-231	ENST00000568542	NES	P48681	1621 aa		28.9	■■■□□ 2.22
MLST8-231	ENST00000568542	CADPS	Q9ULU8	1353 aa		28.86	■■■□□ 2.21
MLST8-231	ENST00000568542	LAMC3	Q9Y6N6	1575 aa		28.82	■■■□□ 2.2
MLST8-231	ENST00000568542	CFTR	P13569	1480 aa		28.81	■■■□□ 2.2
MLST8-231	ENST00000568542	PRDM2	Q13029	1718 aa		28.66	■■■□□ 2.18
MLST8-231	ENST00000568542	PDS5B	Q9NTI5	1447 aa		28.58	■■■□□ 2.17
MLST8-231	ENST00000568542	KIF21A	Q7Z4S6	1674 aa		28.57	■■■□□ 2.16
MLST8-231	ENST00000568542	FANCD2	Q9BXW9	1451 aa		28.55	■■■□□ 2.16
MLST8-231	ENST00000568542	ERCC6	Q03468	1493 aa		28.5	■■■□□ 2.15
MLST8-231	ENST00000568542	CEP164	Q9UPV0	1460 aa		28.45	■■■□□ 2.14
MLST8-231	ENST00000568542	HRC	P23327	699 aa		28.44	■■■□□ 2.14
MLST8-231	ENST00000568542	TRIM41	Q8WV44	630 aa		28.42	■■■□□ 2.14
MLST8-231	ENST00000568542	LOC105371045	A0A1W2PR82	267 aa		28.41	■■■□□ 2.14
MLST8-231	ENST00000568542	PCGF6	Q9BYE7	350 aa		28.34	■■■□□ 2.13
MLST8-231	ENST00000568542	THOC2	Q8NI27	1593 aa	Known RBP	28.31	■■■□□ 2.12
MLST8-231	ENST00000568542	MRC2	Q9UBG0	1479 aa		28.3	■■■□□ 2.12
MLST8-231	ENST00000568542	ABCC8	Q09428	1581 aa		28.28	■■■□□ 2.12
MLST8-231	ENST00000568542	URB2	Q14146	1524 aa	Known RBP	28.27	■■■□□ 2.12
MLST8-231	ENST00000568542	WDR62	O43379	1518 aa		28.19	■■■□□ 2.1
MLST8-231	ENST00000568542	CUX1	P39880	1505 aa		28.18	■■■□□ 2.1
MLST8-231	ENST00000568542	DNMBP	Q6XZF7	1577 aa		28.17	■■■□□ 2.1
MLST8-231	ENST00000568542	TOPBP1	Q92547	1522 aa		28.16	■■■□□ 2.1
MLST8-231	ENST00000568542	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.16	■■■□□ 2.1
MLST8-231	ENST00000568542	TRIM26	Q12899	539 aa	Predicted RBP	28.12	■■■□□ 2.09
MLST8-231	ENST00000568542	SYNJ1	O43426	1573 aa		28.12	■■■□□ 2.09
MLST8-231	ENST00000568542	BIVM-ERCC5	R4GMW8	1640 aa		28.06	■■■□□ 2.08
MLST8-231	ENST00000568542	TOP2B	Q02880	1626 aa		28.05	■■■□□ 2.08
MLST8-231	ENST00000568542	FGD5	Q6ZNL6	1462 aa		27.99	■■■□□ 2.07
MLST8-231	ENST00000568542	CUX2	O14529	1486 aa		27.97	■■■□□ 2.07
MLST8-231	ENST00000568542	POLA1	P09884	1462 aa	Predicted RBP	27.96	■■■□□ 2.07
MLST8-231	ENST00000568542	RAD54L2	Q9Y4B4	1467 aa		27.87	■■■□□ 2.05
MLST8-231	ENST00000568542	FAM9A	Q8IZU1	332 aa	Predicted RBP	27.85	■■■□□ 2.05
MLST8-231	ENST00000568542	SOGA1	O94964	1423 aa		27.85	■■■□□ 2.05
MLST8-231	ENST00000568542	TARBP1	Q13395	1621 aa	Known RBP	27.83	■■■□□ 2.05
MLST8-231	ENST00000568542	IFT140	Q96RY7	1462 aa		27.82	■■■□□ 2.04
MLST8-231	ENST00000568542	WDR97	A6NE52	1622 aa		27.74	■■■□□ 2.03
MLST8-231	ENST00000568542	ABCA10	Q8WWZ4	1543 aa		27.71	■■■□□ 2.03
MLST8-231	ENST00000568542	ZNF608	Q9ULD9	1512 aa	Predicted RBP	27.71	■■■□□ 2.03
MLST8-231	ENST00000568542	ZEB1	P37275	1124 aa	Predicted RBP	27.68	■■■□□ 2.02
MLST8-231	ENST00000568542	TDRD9	Q8NDG6	1382 aa	Known RBP	27.65	■■■□□ 2.02
MLST8-231	ENST00000568542	AQR	O60306	1485 aa	Known RBP eCLIP	27.61	■■■□□ 2.01	3e-8	■■■■■ 34
MLST8-231	ENST00000568542	EIF4G3	O43432	1585 aa	Known RBP	27.61	■■■□□ 2.01
MLST8-231	ENST00000568542	EEA1	Q15075	1411 aa		27.6	■■■□□ 2.01
MLST8-231	ENST00000568542	ABCA5	Q8WWZ7	1642 aa		27.58	■■■□□ 2.01
MLST8-231	ENST00000568542	RUSC2	Q8N2Y8	1516 aa		27.54	■■■□□ 2
MLST8-231	ENST00000568542	GAPVD1	Q14C86	1478 aa		27.53	■■■□□ 2
MLST8-231	ENST00000568542	KIF27	Q86VH2	1401 aa		27.51	■■□□□ 1.99
MLST8-231	ENST00000568542	PBRM1	Q86U86	1689 aa		27.49	■■□□□ 1.99
MLST8-231	ENST00000568542	PPARGC1B	Q86YN6	1023 aa	Known RBP	27.46	■■□□□ 1.99
MLST8-231	ENST00000568542	GRIN2B	Q13224	1484 aa		27.44	■■□□□ 1.98
MLST8-231	ENST00000568542	EHMT2	Q96KQ7	1210 aa		27.38	■■□□□ 1.97
MLST8-231	ENST00000568542	ERICH3	Q5RHP9	1530 aa		27.37	■■□□□ 1.97
MLST8-231	ENST00000568542	SNAPC4	Q5SXM2	1469 aa		27.37	■■□□□ 1.97
MLST8-231	ENST00000568542	IGF1R	P08069	1367 aa		27.36	■■□□□ 1.97
MLST8-231	ENST00000568542	TNIK	Q9UKE5	1360 aa		27.35	■■□□□ 1.97
MLST8-231	ENST00000568542	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.29	■■□□□ 1.96
MLST8-231	ENST00000568542	CSRNP3	Q8WYN3	585 aa		27.29	■■□□□ 1.96
MLST8-231	ENST00000568542	ADAMTS12	P58397	1594 aa		27.28	■■□□□ 1.96
MLST8-231	ENST00000568542	CUL7	Q14999	1698 aa		27.24	■■□□□ 1.95
MLST8-231	ENST00000568542	CEP162	Q5TB80	1403 aa		27.24	■■□□□ 1.95
MLST8-231	ENST00000568542	FHAD1	B1AJZ9	1412 aa		27.22	■■□□□ 1.95
MLST8-231	ENST00000568542	GOLGA3	Q08378	1498 aa		27.22	■■□□□ 1.95
MLST8-231	ENST00000568542	CARMIL1	Q5VZK9	1371 aa		27.21	■■□□□ 1.95
MLST8-231	ENST00000568542	SYNJ2	O15056	1496 aa		27.19	■■□□□ 1.94
MLST8-231	ENST00000568542	CHD1	O14646	1710 aa		27.19	■■□□□ 1.94
MLST8-231	ENST00000568542	FBLN2	P98095	1184 aa		27.16	■■□□□ 1.94
MLST8-231	ENST00000568542	PRX	Q9BXM0	1461 aa		27.14	■■□□□ 1.94

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms