RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
CCNDBP1-213ENST00000568507 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
CCNDBP1-213ENST00000568507 ABCC9O60706 1549 aa32.86■■■□□ 2.85
CCNDBP1-213ENST00000568507 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
CCNDBP1-213ENST00000568507 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
CCNDBP1-213ENST00000568507 NACADO15069 1562 aa31.17■■■□□ 2.58
CCNDBP1-213ENST00000568507 MYO15BQ96JP2 1530 aa30.79■■■□□ 2.52
CCNDBP1-213ENST00000568507 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
CCNDBP1-213ENST00000568507 DNAJC5BQ9UF47 199 aa30.65■■■□□ 2.5
CCNDBP1-213ENST00000568507 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
CCNDBP1-213ENST00000568507 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
CCNDBP1-213ENST00000568507 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
CCNDBP1-213ENST00000568507 BICRAQ9NZM4 1560 aa30.35■■■□□ 2.45
CCNDBP1-213ENST00000568507 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
CCNDBP1-213ENST00000568507 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.39
CCNDBP1-213ENST00000568507 CC2D2AQ9P2K1 1620 aa29.63■■■□□ 2.33
CCNDBP1-213ENST00000568507 EIF4G1Q04637 1599 aaKnown RBP29.63■■■□□ 2.33
CCNDBP1-213ENST00000568507 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
CCNDBP1-213ENST00000568507 NCAPD3P42695 1498 aa28.8■■■□□ 2.2
CCNDBP1-213ENST00000568507 ATAD2BQ9ULI0 1458 aa28.74■■■□□ 2.19
CCNDBP1-213ENST00000568507 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
CCNDBP1-213ENST00000568507 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
CCNDBP1-213ENST00000568507 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.17
CCNDBP1-213ENST00000568507 HMGXB3Q12766 1538 aa28.55■■■□□ 2.16
CCNDBP1-213ENST00000568507 BAZ1BQ9UIG0 1483 aaKnown RBP28.49■■■□□ 2.15
CCNDBP1-213ENST00000568507 MROH2BQ7Z745 1585 aa28.43■■■□□ 2.14
CCNDBP1-213ENST00000568507 PEG3Q9GZU2 1588 aa28.41■■■□□ 2.14
CCNDBP1-213ENST00000568507 ERCC6Q03468 1493 aa28.41■■■□□ 2.14
CCNDBP1-213ENST00000568507 NESP48681 1621 aa28.26■■■□□ 2.11
CCNDBP1-213ENST00000568507 CUX2O14529 1486 aa28.22■■■□□ 2.11
CCNDBP1-213ENST00000568507 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
CCNDBP1-213ENST00000568507 WIZO95785 1651 aa28.07■■■□□ 2.08
CCNDBP1-213ENST00000568507 DNAJC5Q9H3Z4 198 aa28.03■■■□□ 2.08
CCNDBP1-213ENST00000568507 PDS5BQ9NTI5 1447 aa28.01■■■□□ 2.07
CCNDBP1-213ENST00000568507 CADPSQ9ULU8 1353 aa27.98■■■□□ 2.07
CCNDBP1-213ENST00000568507 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
CCNDBP1-213ENST00000568507 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
CCNDBP1-213ENST00000568507 KIF21AQ7Z4S6 1674 aa27.82■■■□□ 2.04
CCNDBP1-213ENST00000568507 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.03
CCNDBP1-213ENST00000568507 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
CCNDBP1-213ENST00000568507 CFTRP13569 1480 aa27.65■■■□□ 2.02
CCNDBP1-213ENST00000568507 CEP164Q9UPV0 1460 aa27.64■■■□□ 2.01
CCNDBP1-213ENST00000568507 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
CCNDBP1-213ENST00000568507 WDR62O43379 1518 aa27.58■■■□□ 2.01
CCNDBP1-213ENST00000568507 CCDC88BA6NC98 1476 aa27.49■■□□□ 1.99
CCNDBP1-213ENST00000568507 URB2Q14146 1524 aaKnown RBP27.34■■□□□ 1.97
CCNDBP1-213ENST00000568507 PRDM2Q13029 1718 aa27.24■■□□□ 1.95
CCNDBP1-213ENST00000568507 ABCC8Q09428 1581 aa27.11■■□□□ 1.93
CCNDBP1-213ENST00000568507 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
CCNDBP1-213ENST00000568507 IFT140Q96RY7 1462 aa27.09■■□□□ 1.93
CCNDBP1-213ENST00000568507 OSCARQ8IYS5 282 aa27.08■■□□□ 1.93
CCNDBP1-213ENST00000568507 SUPT5HO00267 1087 aaKnown RBP27.01■■□□□ 1.91
CCNDBP1-213ENST00000568507 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.91
CCNDBP1-213ENST00000568507 ZNF608Q9ULD9 1512 aaPredicted RBP26.99■■□□□ 1.91
CCNDBP1-213ENST00000568507 TRIM41Q8WV44 630 aa26.96■■□□□ 1.91
CCNDBP1-213ENST00000568507 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
CCNDBP1-213ENST00000568507 AQRO60306 1485 aaKnown RBP eCLIP26.82■■□□□ 1.882e-6■■□□□ 13.6
CCNDBP1-213ENST00000568507 EIF4G3O43432 1585 aaKnown RBP26.8■■□□□ 1.88
CCNDBP1-213ENST00000568507 SOGA1O94964 1423 aa26.8■■□□□ 1.88
CCNDBP1-213ENST00000568507 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
CCNDBP1-213ENST00000568507 RAD54L2Q9Y4B4 1467 aa26.77■■□□□ 1.88
CCNDBP1-213ENST00000568507 FGD5Q6ZNL6 1462 aa26.72■■□□□ 1.87
CCNDBP1-213ENST00000568507 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
CCNDBP1-213ENST00000568507 FBLN2P98095 1184 aa26.71■■□□□ 1.87
CCNDBP1-213ENST00000568507 CUX1P39880 1505 aa26.69■■□□□ 1.86
CCNDBP1-213ENST00000568507 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
CCNDBP1-213ENST00000568507 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
CCNDBP1-213ENST00000568507 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
CCNDBP1-213ENST00000568507 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
CCNDBP1-213ENST00000568507 CHMP7Q8WUX9 453 aaPredicted RBP26.54■■□□□ 1.84
CCNDBP1-213ENST00000568507 CHD1O14646 1710 aa26.52■■□□□ 1.84
CCNDBP1-213ENST00000568507 SNAPC4Q5SXM2 1469 aa26.52■■□□□ 1.84
CCNDBP1-213ENST00000568507 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
CCNDBP1-213ENST00000568507 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
CCNDBP1-213ENST00000568507 MAGI1Q96QZ7 1491 aaPredicted RBP26.46■■□□□ 1.83
CCNDBP1-213ENST00000568507 GAPVD1Q14C86 1478 aa26.44■■□□□ 1.82
CCNDBP1-213ENST00000568507 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
CCNDBP1-213ENST00000568507 ABCA10Q8WWZ4 1543 aa26.42■■□□□ 1.82
CCNDBP1-213ENST00000568507 WRNQ14191 1432 aaPredicted RBP eCLIP26.42■■□□□ 1.82
CCNDBP1-213ENST00000568507 SYNJ2O15056 1496 aa26.39■■□□□ 1.81
CCNDBP1-213ENST00000568507 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
CCNDBP1-213ENST00000568507 TOP2BQ02880 1626 aa26.32■■□□□ 1.8
CCNDBP1-213ENST00000568507 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
CCNDBP1-213ENST00000568507 ABCA5Q8WWZ7 1642 aa26.29■■□□□ 1.8
CCNDBP1-213ENST00000568507 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
CCNDBP1-213ENST00000568507 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
CCNDBP1-213ENST00000568507 CLASP1Q7Z460 1538 aa26.27■■□□□ 1.8
CCNDBP1-213ENST00000568507 GRIN2AQ12879 1464 aa26.14■■□□□ 1.77
CCNDBP1-213ENST00000568507 FHAD1B1AJZ9 1412 aa26.13■■□□□ 1.77
CCNDBP1-213ENST00000568507 TRHP20396 242 aaPredicted RBP26.11■■□□□ 1.77
CCNDBP1-213ENST00000568507 ADAMTS12P58397 1594 aa26.1■■□□□ 1.77
CCNDBP1-213ENST00000568507 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
CCNDBP1-213ENST00000568507 NUP160Q12769 1436 aa26.03■■□□□ 1.76
CCNDBP1-213ENST00000568507 CEP170Q5SW79 1584 aa26■■□□□ 1.75
CCNDBP1-213ENST00000568507 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
CCNDBP1-213ENST00000568507 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
CCNDBP1-213ENST00000568507 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
CCNDBP1-213ENST00000568507 IGF1RP08069 1367 aa25.87■■□□□ 1.73
CCNDBP1-213ENST00000568507 SHROOM2Q13796 1616 aa25.83■■□□□ 1.73
CCNDBP1-213ENST00000568507 PRG4Q92954 1404 aaPredicted RBP25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms