RNA–Protein interactions for RNA: ENST00000568212.1

RSRP1-216, Transcript of arginine and serine rich protein 1, humanhuman

TSL 4

Gene RSRP1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSRP1-216ENST00000568212 NISCHQ9Y2I1 1504 aa34.5■■■■□ 3.11
RSRP1-216ENST00000568212 ABCC9O60706 1549 aa31.36■■■□□ 2.61
RSRP1-216ENST00000568212 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
RSRP1-216ENST00000568212 RB1CC1Q8TDY2 1594 aa29.79■■■□□ 2.36
RSRP1-216ENST00000568212 DNAJC5BQ9UF47 199 aa29.68■■■□□ 2.34
RSRP1-216ENST00000568212 NACADO15069 1562 aa29.52■■■□□ 2.32
RSRP1-216ENST00000568212 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
RSRP1-216ENST00000568212 PABPN1Q86U42 306 aaKnown RBP eCLIP29.16■■■□□ 2.26
RSRP1-216ENST00000568212 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
RSRP1-216ENST00000568212 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
RSRP1-216ENST00000568212 BICRAQ9NZM4 1560 aa28.86■■■□□ 2.21
RSRP1-216ENST00000568212 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
RSRP1-216ENST00000568212 DCAF1Q9Y4B6 1507 aa28.49■■■□□ 2.15
RSRP1-216ENST00000568212 ZCCHC6Q5VYS8 1495 aaKnown RBP28.48■■■□□ 2.15
RSRP1-216ENST00000568212 CC2D2AQ9P2K1 1620 aa28.35■■■□□ 2.13
RSRP1-216ENST00000568212 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
RSRP1-216ENST00000568212 SCRIBQ14160 1630 aa28.28■■■□□ 2.12
RSRP1-216ENST00000568212 EIF4G1Q04637 1599 aaKnown RBP28.2■■■□□ 2.1
RSRP1-216ENST00000568212 DNAJC5Q9H3Z4 198 aa27.57■■■□□ 2
RSRP1-216ENST00000568212 NCAPD3P42695 1498 aa27.22■■□□□ 1.95
RSRP1-216ENST00000568212 CUX2O14529 1486 aa27.21■■□□□ 1.95
RSRP1-216ENST00000568212 ERCC6Q03468 1493 aa27.15■■□□□ 1.94
RSRP1-216ENST00000568212 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
RSRP1-216ENST00000568212 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
RSRP1-216ENST00000568212 HMGXB3Q12766 1538 aa26.98■■□□□ 1.91
RSRP1-216ENST00000568212 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
RSRP1-216ENST00000568212 NESP48681 1621 aa26.83■■□□□ 1.89
RSRP1-216ENST00000568212 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
RSRP1-216ENST00000568212 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
RSRP1-216ENST00000568212 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
RSRP1-216ENST00000568212 LAMC3Q9Y6N6 1575 aa26.68■■□□□ 1.86
RSRP1-216ENST00000568212 THOC2Q8NI27 1593 aaKnown RBP26.63■■□□□ 1.85
RSRP1-216ENST00000568212 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
RSRP1-216ENST00000568212 KIF21AQ7Z4S6 1674 aa26.54■■□□□ 1.84
RSRP1-216ENST00000568212 MROH2BQ7Z745 1585 aa26.54■■□□□ 1.84
RSRP1-216ENST00000568212 CADPSQ9ULU8 1353 aa26.38■■□□□ 1.81
RSRP1-216ENST00000568212 MRC2Q9UBG0 1479 aa26.29■■□□□ 1.8
RSRP1-216ENST00000568212 WIZO95785 1651 aa26.25■■□□□ 1.79
RSRP1-216ENST00000568212 WDR62O43379 1518 aa26.22■■□□□ 1.79
RSRP1-216ENST00000568212 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
RSRP1-216ENST00000568212 CEP164Q9UPV0 1460 aa26.13■■□□□ 1.77
RSRP1-216ENST00000568212 AEBP2Q6ZN18 517 aaPredicted RBP26.1■■□□□ 1.77
RSRP1-216ENST00000568212 FANCD2Q9BXW9 1451 aa26.06■■□□□ 1.76
RSRP1-216ENST00000568212 CFTRP13569 1480 aa25.99■■□□□ 1.75
RSRP1-216ENST00000568212 OSCARQ8IYS5 282 aa25.99■■□□□ 1.75
RSRP1-216ENST00000568212 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
RSRP1-216ENST00000568212 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
RSRP1-216ENST00000568212 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.73
RSRP1-216ENST00000568212 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
RSRP1-216ENST00000568212 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
RSRP1-216ENST00000568212 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
RSRP1-216ENST00000568212 CCDC88BA6NC98 1476 aa25.6■■□□□ 1.69
RSRP1-216ENST00000568212 RIMBP3CA6NJZ7 1639 aa25.59■■□□□ 1.69
RSRP1-216ENST00000568212 RIMBP3BA6NNM3 1639 aa25.59■■□□□ 1.69
RSRP1-216ENST00000568212 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
RSRP1-216ENST00000568212 ZNF608Q9ULD9 1512 aaPredicted RBP25.56■■□□□ 1.68
RSRP1-216ENST00000568212 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
RSRP1-216ENST00000568212 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
RSRP1-216ENST00000568212 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
RSRP1-216ENST00000568212 EIF4G3O43432 1585 aaKnown RBP25.43■■□□□ 1.66
RSRP1-216ENST00000568212 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
RSRP1-216ENST00000568212 CYB5RLQ6IPT4 315 aa25.37■■□□□ 1.65
RSRP1-216ENST00000568212 CHD1O14646 1710 aa25.35■■□□□ 1.65
RSRP1-216ENST00000568212 TARBP1Q13395 1621 aaKnown RBP25.33■■□□□ 1.65
RSRP1-216ENST00000568212 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.641e-7■■■■■ 36.3
RSRP1-216ENST00000568212 FBLN2P98095 1184 aa25.3■■□□□ 1.64
RSRP1-216ENST00000568212 POLA1P09884 1462 aaPredicted RBP25.24■■□□□ 1.63
RSRP1-216ENST00000568212 TRHP20396 242 aaPredicted RBP25.21■■□□□ 1.63
RSRP1-216ENST00000568212 SOGA1O94964 1423 aa25.18■■□□□ 1.62
RSRP1-216ENST00000568212 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
RSRP1-216ENST00000568212 RAD54L2Q9Y4B4 1467 aa25.15■■□□□ 1.62
RSRP1-216ENST00000568212 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
RSRP1-216ENST00000568212 WDR97A6NE52 1622 aa25.12■■□□□ 1.61
RSRP1-216ENST00000568212 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
RSRP1-216ENST00000568212 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
RSRP1-216ENST00000568212 FGD5Q6ZNL6 1462 aa25.04■■□□□ 1.6
RSRP1-216ENST00000568212 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
RSRP1-216ENST00000568212 MAGI1Q96QZ7 1491 aaPredicted RBP25.01■■□□□ 1.59
RSRP1-216ENST00000568212 CLASP1Q7Z460 1538 aa24.99■■□□□ 1.59
RSRP1-216ENST00000568212 GRIN2BQ13224 1484 aa24.98■■□□□ 1.59
RSRP1-216ENST00000568212 CUX1P39880 1505 aa24.95■■□□□ 1.58
RSRP1-216ENST00000568212 SYNJ2O15056 1496 aa24.92■■□□□ 1.58
RSRP1-216ENST00000568212 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
RSRP1-216ENST00000568212 GAPVD1Q14C86 1478 aa24.84■■□□□ 1.57
RSRP1-216ENST00000568212 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
RSRP1-216ENST00000568212 ABCA5Q8WWZ7 1642 aa24.73■■□□□ 1.55
RSRP1-216ENST00000568212 GRIN2AQ12879 1464 aa24.63■■□□□ 1.53
RSRP1-216ENST00000568212 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
RSRP1-216ENST00000568212 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
RSRP1-216ENST00000568212 ADAMTS12P58397 1594 aa24.54■■□□□ 1.52
RSRP1-216ENST00000568212 CEP170Q5SW79 1584 aa24.54■■□□□ 1.52
RSRP1-216ENST00000568212 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
RSRP1-216ENST00000568212 NUP160Q12769 1436 aa24.54■■□□□ 1.52
RSRP1-216ENST00000568212 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
RSRP1-216ENST00000568212 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
RSRP1-216ENST00000568212 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
RSRP1-216ENST00000568212 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
RSRP1-216ENST00000568212 ERICH3Q5RHP9 1530 aa24.46■■□□□ 1.51
RSRP1-216ENST00000568212 KIF13AQ9H1H9 1805 aa24.38■■□□□ 1.49
RSRP1-216ENST00000568212 JPH4Q96JJ6 628 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms