RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 NISCHQ9Y2I1 1504 aa28.07■■■□□ 2.08
FANCA-227ENST00000567883 ABCC9O60706 1549 aa25.37■■□□□ 1.65
FANCA-227ENST00000567883 CCDC180Q9P1Z9 1646 aa25.29■■□□□ 1.64
FANCA-227ENST00000567883 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
FANCA-227ENST00000567883 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
FANCA-227ENST00000567883 NACADO15069 1562 aa23.95■■□□□ 1.42
FANCA-227ENST00000567883 DCAF8L2P0C7V8 631 aa23.69■■□□□ 1.38
FANCA-227ENST00000567883 MYO15BQ96JP2 1530 aa23.6■■□□□ 1.37
FANCA-227ENST00000567883 UNC13AQ9UPW8 1703 aa23.59■■□□□ 1.37
FANCA-227ENST00000567883 PABPN1Q86U42 306 aaKnown RBP eCLIP23.59■■□□□ 1.37
FANCA-227ENST00000567883 BICRAQ9NZM4 1560 aa23.44■■□□□ 1.34
FANCA-227ENST00000567883 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
FANCA-227ENST00000567883 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
FANCA-227ENST00000567883 SHROOM4Q9ULL8 1493 aa23.15■■□□□ 1.3
FANCA-227ENST00000567883 SCRIBQ14160 1630 aa22.95■■□□□ 1.26
FANCA-227ENST00000567883 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
FANCA-227ENST00000567883 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
FANCA-227ENST00000567883 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
FANCA-227ENST00000567883 DNAJC5Q9H3Z4 198 aa22.18■■□□□ 1.14
FANCA-227ENST00000567883 NCAPD3P42695 1498 aa22.11■■□□□ 1.13
FANCA-227ENST00000567883 CUX2O14529 1486 aa22■■□□□ 1.11
FANCA-227ENST00000567883 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
FANCA-227ENST00000567883 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
FANCA-227ENST00000567883 ERCC6Q03468 1493 aa21.93■■□□□ 1.1
FANCA-227ENST00000567883 SMARCA4P51532 1647 aa21.92■■□□□ 1.1
FANCA-227ENST00000567883 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
FANCA-227ENST00000567883 BAZ1AQ9NRL2 1556 aaPredicted RBP21.8■■□□□ 1.08
FANCA-227ENST00000567883 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
FANCA-227ENST00000567883 BAZ1BQ9UIG0 1483 aaKnown RBP21.76■■□□□ 1.07
FANCA-227ENST00000567883 NESP48681 1621 aa21.75■■□□□ 1.07
FANCA-227ENST00000567883 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
FANCA-227ENST00000567883 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
FANCA-227ENST00000567883 THOC2Q8NI27 1593 aaKnown RBP21.6■■□□□ 1.05
FANCA-227ENST00000567883 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
FANCA-227ENST00000567883 KIF21AQ7Z4S6 1674 aa21.5■■□□□ 1.03
FANCA-227ENST00000567883 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
FANCA-227ENST00000567883 WIZO95785 1651 aa21.33■■□□□ 1
FANCA-227ENST00000567883 MRC2Q9UBG0 1479 aa21.31■■□□□ 1
FANCA-227ENST00000567883 WDR62O43379 1518 aa21.28■■□□□ 1
FANCA-227ENST00000567883 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
FANCA-227ENST00000567883 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
FANCA-227ENST00000567883 CFTRP13569 1480 aa21.14■□□□□ 0.98
FANCA-227ENST00000567883 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
FANCA-227ENST00000567883 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
FANCA-227ENST00000567883 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
FANCA-227ENST00000567883 URB2Q14146 1524 aaKnown RBP20.98■□□□□ 0.95
FANCA-227ENST00000567883 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
FANCA-227ENST00000567883 PRDM2Q13029 1718 aa20.93■□□□□ 0.94
FANCA-227ENST00000567883 CCDC88BA6NC98 1476 aa20.82■□□□□ 0.92
FANCA-227ENST00000567883 IFT140Q96RY7 1462 aa20.79■□□□□ 0.92
FANCA-227ENST00000567883 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
FANCA-227ENST00000567883 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
FANCA-227ENST00000567883 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
FANCA-227ENST00000567883 RIMBP3CA6NJZ7 1639 aa20.68■□□□□ 0.9
FANCA-227ENST00000567883 RIMBP3BA6NNM3 1639 aa20.68■□□□□ 0.9
FANCA-227ENST00000567883 RIMBP3Q9UFD9 1639 aa20.68■□□□□ 0.9
FANCA-227ENST00000567883 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
FANCA-227ENST00000567883 EIF4G3O43432 1585 aaKnown RBP20.63■□□□□ 0.89
FANCA-227ENST00000567883 ARHGEF11O15085 1522 aa20.6■□□□□ 0.89
FANCA-227ENST00000567883 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
FANCA-227ENST00000567883 AQRO60306 1485 aaKnown RBP eCLIP20.54■□□□□ 0.881e-9■■■■□ 23.7
FANCA-227ENST00000567883 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
FANCA-227ENST00000567883 CHD1O14646 1710 aa20.51■□□□□ 0.87
FANCA-227ENST00000567883 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
FANCA-227ENST00000567883 SOGA1O94964 1423 aa20.42■□□□□ 0.86
FANCA-227ENST00000567883 FBLN2P98095 1184 aa20.41■□□□□ 0.86
FANCA-227ENST00000567883 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
FANCA-227ENST00000567883 WDR97A6NE52 1622 aa20.39■□□□□ 0.86
FANCA-227ENST00000567883 ARAP1Q96P48 1450 aa20.37■□□□□ 0.85
FANCA-227ENST00000567883 TDRD9Q8NDG6 1382 aaKnown RBP20.37■□□□□ 0.85
FANCA-227ENST00000567883 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
FANCA-227ENST00000567883 SNAPC4Q5SXM2 1469 aa20.3■□□□□ 0.84
FANCA-227ENST00000567883 CUX1P39880 1505 aa20.3■□□□□ 0.84
FANCA-227ENST00000567883 MAGI1Q96QZ7 1491 aaPredicted RBP20.29■□□□□ 0.84
FANCA-227ENST00000567883 CLASP1Q7Z460 1538 aa20.28■□□□□ 0.84
FANCA-227ENST00000567883 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
FANCA-227ENST00000567883 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
FANCA-227ENST00000567883 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
FANCA-227ENST00000567883 SYNJ1O43426 1573 aa20.25■□□□□ 0.83
FANCA-227ENST00000567883 SYNJ2O15056 1496 aa20.22■□□□□ 0.83
FANCA-227ENST00000567883 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
FANCA-227ENST00000567883 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
FANCA-227ENST00000567883 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
FANCA-227ENST00000567883 ABCA5Q8WWZ7 1642 aa20.11■□□□□ 0.81
FANCA-227ENST00000567883 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
FANCA-227ENST00000567883 GRIN2AQ12879 1464 aa20■□□□□ 0.79
FANCA-227ENST00000567883 SUPT5HO00267 1087 aaKnown RBP19.98■□□□□ 0.79
FANCA-227ENST00000567883 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
FANCA-227ENST00000567883 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
FANCA-227ENST00000567883 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
FANCA-227ENST00000567883 NUP160Q12769 1436 aa19.95■□□□□ 0.78
FANCA-227ENST00000567883 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
FANCA-227ENST00000567883 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
FANCA-227ENST00000567883 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
FANCA-227ENST00000567883 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
FANCA-227ENST00000567883 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
FANCA-227ENST00000567883 AEBP2Q6ZN18 517 aaPredicted RBP19.81■□□□□ 0.76
FANCA-227ENST00000567883 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
FANCA-227ENST00000567883 JPH4Q96JJ6 628 aa19.74■□□□□ 0.75
FANCA-227ENST00000567883 KIF13AQ9H1H9 1805 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms