RNA–Protein interactions for RNA: ENST00000567790.1

STUB1-210, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 428 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-210ENST00000567790 NISCHQ9Y2I1 1504 aa38.49■■■■□ 3.75
STUB1-210ENST00000567790 CCDC180Q9P1Z9 1646 aa34.49■■■■□ 3.11
STUB1-210ENST00000567790 ABCC9O60706 1549 aa34.43■■■■□ 3.1
STUB1-210ENST00000567790 RB1CC1Q8TDY2 1594 aa32.87■■■□□ 2.85
STUB1-210ENST00000567790 NACADO15069 1562 aa32.69■■■□□ 2.82
STUB1-210ENST00000567790 DCAF8L2P0C7V8 631 aa32.45■■■□□ 2.79
STUB1-210ENST00000567790 MYO15BQ96JP2 1530 aa32.33■■■□□ 2.77
STUB1-210ENST00000567790 DNAJC5BQ9UF47 199 aa32.31■■■□□ 2.76
STUB1-210ENST00000567790 PABPN1Q86U42 306 aaKnown RBP eCLIP32.08■■■□□ 2.73
STUB1-210ENST00000567790 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
STUB1-210ENST00000567790 ZCCHC6Q5VYS8 1495 aaKnown RBP31.89■■■□□ 2.7
STUB1-210ENST00000567790 DCAF1Q9Y4B6 1507 aa31.89■■■□□ 2.7
STUB1-210ENST00000567790 BICRAQ9NZM4 1560 aa31.82■■■□□ 2.68
STUB1-210ENST00000567790 SHROOM4Q9ULL8 1493 aa31.61■■■□□ 2.65
STUB1-210ENST00000567790 SCRIBQ14160 1630 aa31.32■■■□□ 2.6
STUB1-210ENST00000567790 CC2D2AQ9P2K1 1620 aa31.1■■■□□ 2.57
STUB1-210ENST00000567790 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
STUB1-210ENST00000567790 EIF4G1Q04637 1599 aaKnown RBP31.08■■■□□ 2.57
STUB1-210ENST00000567790 NCAPD3P42695 1498 aa30.21■■■□□ 2.43
STUB1-210ENST00000567790 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
STUB1-210ENST00000567790 SMARCA2P51531 1590 aa29.99■■■□□ 2.39
STUB1-210ENST00000567790 SMARCA4P51532 1647 aa29.96■■■□□ 2.39
STUB1-210ENST00000567790 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
STUB1-210ENST00000567790 BAZ1AQ9NRL2 1556 aaPredicted RBP29.89■■■□□ 2.38
STUB1-210ENST00000567790 CUX2O14529 1486 aa29.8■■■□□ 2.36
STUB1-210ENST00000567790 DNAJC5Q9H3Z4 198 aa29.79■■■□□ 2.36
STUB1-210ENST00000567790 ERCC6Q03468 1493 aa29.79■■■□□ 2.36
STUB1-210ENST00000567790 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
STUB1-210ENST00000567790 PEG3Q9GZU2 1588 aa29.75■■■□□ 2.35
STUB1-210ENST00000567790 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
STUB1-210ENST00000567790 NESP48681 1621 aa29.55■■■□□ 2.32
STUB1-210ENST00000567790 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
STUB1-210ENST00000567790 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
STUB1-210ENST00000567790 CADPSQ9ULU8 1353 aa29.29■■■□□ 2.28
STUB1-210ENST00000567790 THOC2Q8NI27 1593 aaKnown RBP29.26■■■□□ 2.27
STUB1-210ENST00000567790 WIZO95785 1651 aa29.17■■■□□ 2.26
STUB1-210ENST00000567790 KIF21AQ7Z4S6 1674 aa29.11■■■□□ 2.25
STUB1-210ENST00000567790 RSF1Q96T23 1441 aaPredicted RBP29.06■■■□□ 2.24
STUB1-210ENST00000567790 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
STUB1-210ENST00000567790 WDR62O43379 1518 aa28.94■■■□□ 2.22
STUB1-210ENST00000567790 CFTRP13569 1480 aa28.93■■■□□ 2.22
STUB1-210ENST00000567790 CEP164Q9UPV0 1460 aa28.91■■■□□ 2.22
STUB1-210ENST00000567790 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
STUB1-210ENST00000567790 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.22
STUB1-210ENST00000567790 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
STUB1-210ENST00000567790 CCDC88BA6NC98 1476 aa28.59■■■□□ 2.17
STUB1-210ENST00000567790 OSCARQ8IYS5 282 aa28.49■■■□□ 2.15
STUB1-210ENST00000567790 PRDM2Q13029 1718 aa28.47■■■□□ 2.15
STUB1-210ENST00000567790 ABCC8Q09428 1581 aa28.4■■■□□ 2.14
STUB1-210ENST00000567790 IFT140Q96RY7 1462 aa28.39■■■□□ 2.13
STUB1-210ENST00000567790 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
STUB1-210ENST00000567790 TOPBP1Q92547 1522 aa28.32■■■□□ 2.12
STUB1-210ENST00000567790 ZNF608Q9ULD9 1512 aaPredicted RBP28.23■■■□□ 2.11
STUB1-210ENST00000567790 DNMBPQ6XZF7 1577 aa28.22■■■□□ 2.11
STUB1-210ENST00000567790 EIF4G3O43432 1585 aaKnown RBP28.04■■■□□ 2.08
STUB1-210ENST00000567790 POLA1P09884 1462 aaPredicted RBP28.03■■■□□ 2.08
STUB1-210ENST00000567790 TARBP1Q13395 1621 aaKnown RBP28.03■■■□□ 2.08
STUB1-210ENST00000567790 AQRO60306 1485 aaKnown RBP eCLIP28.01■■■□□ 2.072e-6■■■■■ 27.8
STUB1-210ENST00000567790 SOGA1O94964 1423 aa27.96■■■□□ 2.07
STUB1-210ENST00000567790 RIMBP3CA6NJZ7 1639 aa27.92■■■□□ 2.06
STUB1-210ENST00000567790 RIMBP3BA6NNM3 1639 aa27.92■■■□□ 2.06
STUB1-210ENST00000567790 RIMBP3Q9UFD9 1639 aa27.92■■■□□ 2.06
STUB1-210ENST00000567790 ARHGEF11O15085 1522 aa27.9■■■□□ 2.06
STUB1-210ENST00000567790 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
STUB1-210ENST00000567790 WDR97A6NE52 1622 aa27.87■■■□□ 2.05
STUB1-210ENST00000567790 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
STUB1-210ENST00000567790 FGD5Q6ZNL6 1462 aa27.84■■■□□ 2.05
STUB1-210ENST00000567790 FBLN2P98095 1184 aa27.84■■■□□ 2.05
STUB1-210ENST00000567790 CUX1P39880 1505 aa27.81■■■□□ 2.04
STUB1-210ENST00000567790 CHD1O14646 1710 aa27.77■■■□□ 2.04
STUB1-210ENST00000567790 CYB5RLQ6IPT4 315 aa27.74■■■□□ 2.03
STUB1-210ENST00000567790 MAGI1Q96QZ7 1491 aaPredicted RBP27.73■■■□□ 2.03
STUB1-210ENST00000567790 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
STUB1-210ENST00000567790 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
STUB1-210ENST00000567790 GRIN2BQ13224 1484 aa27.71■■■□□ 2.03
STUB1-210ENST00000567790 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
STUB1-210ENST00000567790 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
STUB1-210ENST00000567790 GAPVD1Q14C86 1478 aa27.61■■■□□ 2.01
STUB1-210ENST00000567790 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
STUB1-210ENST00000567790 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
STUB1-210ENST00000567790 SYNJ1O43426 1573 aa27.59■■■□□ 2.01
STUB1-210ENST00000567790 CLASP1Q7Z460 1538 aa27.57■■■□□ 2
STUB1-210ENST00000567790 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
STUB1-210ENST00000567790 ABCA5Q8WWZ7 1642 aa27.45■■□□□ 1.99
STUB1-210ENST00000567790 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
STUB1-210ENST00000567790 TRHP20396 242 aaPredicted RBP27.41■■□□□ 1.98
STUB1-210ENST00000567790 TOP2BQ02880 1626 aa27.39■■□□□ 1.98
STUB1-210ENST00000567790 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
STUB1-210ENST00000567790 GRIN2AQ12879 1464 aa27.32■■□□□ 1.96
STUB1-210ENST00000567790 FHAD1B1AJZ9 1412 aa27.29■■□□□ 1.96
STUB1-210ENST00000567790 NUP160Q12769 1436 aa27.27■■□□□ 1.96
STUB1-210ENST00000567790 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
STUB1-210ENST00000567790 ADAMTS12P58397 1594 aa27.25■■□□□ 1.95
STUB1-210ENST00000567790 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
STUB1-210ENST00000567790 SHROOM2Q13796 1616 aa27.07■■□□□ 1.92
STUB1-210ENST00000567790 JPH4Q96JJ6 628 aa27.04■■□□□ 1.92
STUB1-210ENST00000567790 ERCC6L2Q5T890 1561 aa27.04■■□□□ 1.92
STUB1-210ENST00000567790 PRG4Q92954 1404 aaPredicted RBP26.98■■□□□ 1.91
STUB1-210ENST00000567790 KIF27Q86VH2 1401 aa26.94■■□□□ 1.9
STUB1-210ENST00000567790 IGF1RP08069 1367 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms