RNA–Protein interactions for RNA: ENST00000567743.5

NAE1-218, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 1 (best)

Gene NAE1, Length 1,460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-218ENST00000567743 NISCHQ9Y2I1 1504 aa43.25■■■■■ 4.51
NAE1-218ENST00000567743 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
NAE1-218ENST00000567743 ABCC9O60706 1549 aa37.54■■■■□ 3.6
NAE1-218ENST00000567743 RB1CC1Q8TDY2 1594 aa36.16■■■■□ 3.38
NAE1-218ENST00000567743 NACADO15069 1562 aa36.14■■■■□ 3.38
NAE1-218ENST00000567743 ZCCHC6Q5VYS8 1495 aaKnown RBP36.07■■■■□ 3.36
NAE1-218ENST00000567743 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
NAE1-218ENST00000567743 DCAF8L2P0C7V8 631 aa35.92■■■■□ 3.34
NAE1-218ENST00000567743 DCAF1Q9Y4B6 1507 aa35.81■■■■□ 3.32
NAE1-218ENST00000567743 UNC13AQ9UPW8 1703 aa35.5■■■■□ 3.27
NAE1-218ENST00000567743 BICRAQ9NZM4 1560 aa35.14■■■■□ 3.22
NAE1-218ENST00000567743 SCRIBQ14160 1630 aa35.1■■■■□ 3.21
NAE1-218ENST00000567743 PABPN1Q86U42 306 aaKnown RBP eCLIP35.02■■■■□ 3.2
NAE1-218ENST00000567743 SHROOM4Q9ULL8 1493 aa34.72■■■■□ 3.15
NAE1-218ENST00000567743 DNAJC5BQ9UF47 199 aa34.4■■■■□ 3.1
NAE1-218ENST00000567743 EIF4G1Q04637 1599 aaKnown RBP34.18■■■■□ 3.06
NAE1-218ENST00000567743 CC2D2AQ9P2K1 1620 aa34.03■■■■□ 3.04
NAE1-218ENST00000567743 CECR2Q9BXF3 1484 aa33.72■■■□□ 2.99
NAE1-218ENST00000567743 SMARCA4P51532 1647 aa33.59■■■□□ 2.97
NAE1-218ENST00000567743 BAZ1AQ9NRL2 1556 aaPredicted RBP33.52■■■□□ 2.96
NAE1-218ENST00000567743 ATAD2BQ9ULI0 1458 aa33.35■■■□□ 2.93
NAE1-218ENST00000567743 MROH2BQ7Z745 1585 aa33.34■■■□□ 2.93
NAE1-218ENST00000567743 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
NAE1-218ENST00000567743 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
NAE1-218ENST00000567743 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
NAE1-218ENST00000567743 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
NAE1-218ENST00000567743 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
NAE1-218ENST00000567743 WIZO95785 1651 aa33.02■■■□□ 2.88
NAE1-218ENST00000567743 RSF1Q96T23 1441 aaPredicted RBP32.93■■■□□ 2.86
NAE1-218ENST00000567743 TOP2AP11388 1531 aaKnown RBP32.64■■■□□ 2.82
NAE1-218ENST00000567743 NESP48681 1621 aa32.53■■■□□ 2.8
NAE1-218ENST00000567743 LAMC3Q9Y6N6 1575 aa32.48■■■□□ 2.79
NAE1-218ENST00000567743 ERCC6Q03468 1493 aa32.32■■■□□ 2.77
NAE1-218ENST00000567743 CADPSQ9ULU8 1353 aa32.31■■■□□ 2.76
NAE1-218ENST00000567743 KIF21AQ7Z4S6 1674 aa32.23■■■□□ 2.75
NAE1-218ENST00000567743 CCDC88BA6NC98 1476 aa32.22■■■□□ 2.75
NAE1-218ENST00000567743 CFTRP13569 1480 aa32.17■■■□□ 2.74
NAE1-218ENST00000567743 PDS5BQ9NTI5 1447 aa32.17■■■□□ 2.74
NAE1-218ENST00000567743 THOC2Q8NI27 1593 aaKnown RBP32.11■■■□□ 2.73
NAE1-218ENST00000567743 PRDM2Q13029 1718 aa32.08■■■□□ 2.73
NAE1-218ENST00000567743 CUX2O14529 1486 aa32.03■■■□□ 2.72
NAE1-218ENST00000567743 SUPT5HO00267 1087 aaKnown RBP31.99■■■□□ 2.71
NAE1-218ENST00000567743 FANCD2Q9BXW9 1451 aa31.97■■■□□ 2.71
NAE1-218ENST00000567743 CEP164Q9UPV0 1460 aa31.94■■■□□ 2.7
NAE1-218ENST00000567743 MRC2Q9UBG0 1479 aa31.89■■■□□ 2.7
NAE1-218ENST00000567743 WDR62O43379 1518 aa31.84■■■□□ 2.69
NAE1-218ENST00000567743 URB2Q14146 1524 aaKnown RBP31.68■■■□□ 2.66
NAE1-218ENST00000567743 TOPBP1Q92547 1522 aa31.49■■■□□ 2.63
NAE1-218ENST00000567743 DNMBPQ6XZF7 1577 aa31.48■■■□□ 2.63
NAE1-218ENST00000567743 ABCC8Q09428 1581 aa31.44■■■□□ 2.62
NAE1-218ENST00000567743 CUX1P39880 1505 aa31.29■■■□□ 2.6
NAE1-218ENST00000567743 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
NAE1-218ENST00000567743 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
NAE1-218ENST00000567743 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.58
NAE1-218ENST00000567743 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
NAE1-218ENST00000567743 ZNF608Q9ULD9 1512 aaPredicted RBP31.14■■■□□ 2.58
NAE1-218ENST00000567743 EIF4G3O43432 1585 aaKnown RBP31.08■■■□□ 2.57
NAE1-218ENST00000567743 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
NAE1-218ENST00000567743 RAD54L2Q9Y4B4 1467 aa31.06■■■□□ 2.56
NAE1-218ENST00000567743 SYNJ1O43426 1573 aa31.04■■■□□ 2.56
NAE1-218ENST00000567743 TOP2BQ02880 1626 aa31.04■■■□□ 2.56
NAE1-218ENST00000567743 WRNQ14191 1432 aaPredicted RBP eCLIP31.03■■■□□ 2.56
NAE1-218ENST00000567743 SOGA1O94964 1423 aa31.02■■■□□ 2.56
NAE1-218ENST00000567743 WDR97A6NE52 1622 aa31.02■■■□□ 2.56
NAE1-218ENST00000567743 AQRO60306 1485 aaKnown RBP eCLIP30.93■■■□□ 2.544e-7■■■■□ 21.6
NAE1-218ENST00000567743 DNAJC5Q9H3Z4 198 aa30.92■■■□□ 2.54
NAE1-218ENST00000567743 ABCA10Q8WWZ4 1543 aa30.85■■■□□ 2.53
NAE1-218ENST00000567743 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
NAE1-218ENST00000567743 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
NAE1-218ENST00000567743 PBRM1Q86U86 1689 aa30.76■■■□□ 2.51
NAE1-218ENST00000567743 CHD1O14646 1710 aa30.71■■■□□ 2.51
NAE1-218ENST00000567743 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.51
NAE1-218ENST00000567743 GRIN2BQ13224 1484 aa30.69■■■□□ 2.5
NAE1-218ENST00000567743 SNAPC4Q5SXM2 1469 aa30.67■■■□□ 2.5
NAE1-218ENST00000567743 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
NAE1-218ENST00000567743 OSCARQ8IYS5 282 aa30.58■■■□□ 2.49
NAE1-218ENST00000567743 SYNJ2O15056 1496 aa30.5■■■□□ 2.47
NAE1-218ENST00000567743 ERICH3Q5RHP9 1530 aa30.48■■■□□ 2.47
NAE1-218ENST00000567743 ADAMTS12P58397 1594 aa30.48■■■□□ 2.47
NAE1-218ENST00000567743 FBLN2P98095 1184 aa30.44■■■□□ 2.46
NAE1-218ENST00000567743 CHMP7Q8WUX9 453 aaPredicted RBP30.38■■■□□ 2.45
NAE1-218ENST00000567743 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
NAE1-218ENST00000567743 CLASP1Q7Z460 1538 aa30.34■■■□□ 2.45
NAE1-218ENST00000567743 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
NAE1-218ENST00000567743 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
NAE1-218ENST00000567743 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.43
NAE1-218ENST00000567743 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.43
NAE1-218ENST00000567743 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.43
NAE1-218ENST00000567743 CUL7Q14999 1698 aa30.25■■■□□ 2.43
NAE1-218ENST00000567743 IGF1RP08069 1367 aa30.23■■■□□ 2.43
NAE1-218ENST00000567743 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
NAE1-218ENST00000567743 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
NAE1-218ENST00000567743 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
NAE1-218ENST00000567743 NUP160Q12769 1436 aa30.2■■■□□ 2.43
NAE1-218ENST00000567743 RUSC2Q8N2Y8 1516 aa30.15■■■□□ 2.42
NAE1-218ENST00000567743 CARMIL1Q5VZK9 1371 aa30.04■■■□□ 2.4
NAE1-218ENST00000567743 SHROOM2Q13796 1616 aa30.03■■■□□ 2.4
NAE1-218ENST00000567743 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
NAE1-218ENST00000567743 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
NAE1-218ENST00000567743 CHIC1Q5VXU3 224 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms